GE213153
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GE213153 vs. ExPASy Swiss-Prot
Match: RS8_SULIN (30S ribosomal protein S8P OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rps8p PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 3.606e-29 Identity = 62/126 (49.21%), Postives = 89/126 (70.63%), Query Frame = -3 Query: 29 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKE---IEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGG 397 MV V+ L +AL S+YN E R +Q +I P+SK++I L VMQK GY+GEFEY+DD R GKI V+L GR+NKCG I+PR+ + ++ + + R LPS++ G I+++TS G+M H+EA R +GG Sbjct: 1 MVFVNPLANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGEFEYIDDGRWGKITVQLLGRVNKCGPITPRYPLSYRQMIALPDYIRRYLPSKEIGIIIVSTSKGVMSHKEAARMRLGG 126
BLAST of GE213153 vs. ExPASy Swiss-Prot
Match: RS8_SULIM (30S ribosomal protein S8P OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rps8p PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 3.606e-29 Identity = 62/126 (49.21%), Postives = 89/126 (70.63%), Query Frame = -3 Query: 29 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKE---IEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGG 397 MV V+ L +AL S+YN E R +Q +I P+SK++I L VMQK GY+GEFEY+DD R GKI V+L GR+NKCG I+PR+ + ++ + + R LPS++ G I+++TS G+M H+EA R +GG Sbjct: 1 MVFVNPLANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGEFEYIDDGRWGKITVQLLGRVNKCGPITPRYPLSYRQMIALPDYIRRYLPSKEIGIIIVSTSKGVMSHKEAARMRLGG 126
BLAST of GE213153 vs. ExPASy Swiss-Prot
Match: RS8_SULIL (30S ribosomal protein S8P OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rps8p PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 3.606e-29 Identity = 62/126 (49.21%), Postives = 89/126 (70.63%), Query Frame = -3 Query: 29 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKE---IEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGG 397 MV V+ L +AL S+YN E R +Q +I P+SK++I L VMQK GY+GEFEY+DD R GKI V+L GR+NKCG I+PR+ + ++ + + R LPS++ G I+++TS G+M H+EA R +GG Sbjct: 1 MVFVNPLANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGEFEYIDDGRWGKITVQLLGRVNKCGPITPRYPLSYRQMIALPDYIRRYLPSKEIGIIIVSTSKGVMSHKEAARMRLGG 126
BLAST of GE213153 vs. ExPASy Swiss-Prot
Match: RS8_SULIK (30S ribosomal protein S8P OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rps8p PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 3.606e-29 Identity = 62/126 (49.21%), Postives = 89/126 (70.63%), Query Frame = -3 Query: 29 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKE---IEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGG 397 MV V+ L +AL S+YN E R +Q +I P+SK++I L VMQK GY+GEFEY+DD R GKI V+L GR+NKCG I+PR+ + ++ + + R LPS++ G I+++TS G+M H+EA R +GG Sbjct: 1 MVFVNPLANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGEFEYIDDGRWGKITVQLLGRVNKCGPITPRYPLSYRQMIALPDYIRRYLPSKEIGIIIVSTSKGVMSHKEAARMRLGG 126
BLAST of GE213153 vs. ExPASy Swiss-Prot
Match: RS8_SULIA (30S ribosomal protein S8P OS=Sulfolobus islandicus (strain M.16.27) GN=rps8p PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 3.606e-29 Identity = 62/126 (49.21%), Postives = 89/126 (70.63%), Query Frame = -3 Query: 29 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKE---IEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGG 397 MV V+ L +AL S+YN E R +Q +I P+SK++I L VMQK GY+GEFEY+DD R GKI V+L GR+NKCG I+PR+ + ++ + + R LPS++ G I+++TS G+M H+EA R +GG Sbjct: 1 MVFVNPLANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGEFEYIDDGRWGKITVQLLGRVNKCGPITPRYPLSYRQMIALPDYIRRYLPSKEIGIIIVSTSKGVMSHKEAARMRLGG 126
BLAST of GE213153 vs. ExPASy Swiss-Prot
Match: RS8_METBU (30S ribosomal protein S8P OS=Methanococcoides burtonii (strain DSM 6242) GN=rps8p PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 3.606e-29 Identity = 63/125 (50.40%), Postives = 82/125 (65.60%), Query Frame = -3 Query: 23 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKV 397 MV + L DAL + NAE GK IRP+SK+I L VM GYIG+FE+V+D +AG VEL GR+NKCG I PR+ VGV E E W + LP++ FG ++LTT G++ EAR NVGG++ Sbjct: 1 MVLLDPLADALSIIKNAEAVGKDSCTIRPASKLIGNVLKVMNDRGYIGDFEFVEDGKAGVYTVELIGRINKCGAIKPRYSVGVTEFERWEKQFLPAKNFGVLILTTPKGVISQYEARENNVGGQL 125
BLAST of GE213153 vs. ExPASy Swiss-Prot
Match: RS8_SULAC (30S ribosomal protein S8P OS=Sulfolobus acidocaldarius GN=rps8p PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 4.710e-29 Identity = 60/126 (47.62%), Postives = 88/126 (69.84%), Query Frame = -3 Query: 29 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDV---GVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGG 397 M ++ L +AL ++YN E R +Q +I P+SK+II L VMQK GYIGEFEY+DD RAGKI+V+L GR+NKCG ISPR+ + G+ + + + LPS++ G I+++T G+M H + R+ +GG Sbjct: 1 MPSINPLANALATLYNNEMRRNKQALITPASKLIISVLRVMQKEGYIGEFEYIDDGRAGKIIVQLLGRINKCGPISPRYPLDYNGLLRLPDYIRKYLPSKEIGIIIISTPKGVMSHRDGIREKIGG 126
BLAST of GE213153 vs. ExPASy Swiss-Prot
Match: RS8_THENV (30S ribosomal protein S8P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rps8p PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 6.152e-29 Identity = 60/123 (48.78%), Postives = 85/123 (69.11%), Query Frame = -3 Query: 29 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGG 397 MV + +L++AL + NAE GKRQV I P +K+I L V+Q+HGY+GE EY+DD R GK VV+L G++N G I PR+ V +EI W + LP+RQ G +V++T+ G+M H EA+ K +GG Sbjct: 1 MVMLDLLSNALIQIKNAEAMGKRQVAIWPVNKLIYYTLRVLQRHGYVGEVEYIDDGRGGKYVVQLLGKINDIGPIKPRYPVKYREIVQWEQKFLPARQIGILVISTNQGVMSHVEAKEKKIGG 123
BLAST of GE213153 vs. ExPASy Swiss-Prot
Match: RS8_THEON (30S ribosomal protein S8P OS=Thermococcus onnurineus (strain NA1) GN=rps8p PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 8.034e-29 Identity = 59/125 (47.20%), Postives = 89/125 (71.20%), Query Frame = -3 Query: 23 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKV 397 M + L +AL + N+E+ GK++V I+P+SK+I + L VMQ++GYIGEFE++DD RAG V+L G++NK G I PRF V +E E W R LP+ +FG ++++TS G+M H+EA K +GG++ Sbjct: 1 MTLLDPLANALSHITNSERVGKKEVYIKPASKLIGEVLRVMQENGYIGEFEFIDDGRAGIYRVQLIGKINKAGAIKPRFPVKAREYEAWEKRFLPAFEFGILIVSTSQGVMTHKEAIEKGIGGRL 125
BLAST of GE213153 vs. ExPASy Swiss-Prot
Match: RS8_METTP (30S ribosomal protein S8P OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=rps8p PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 8.034e-29 Identity = 58/117 (49.57%), Postives = 83/117 (70.94%), Query Frame = -3 Query: 29 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGG 379 L DA+ ++ NAE GK + +I+P+SK+I L VM GYIGEFE++DD ++G V+L GR+N+CGVI PRF + V E+E W R LP+R FG ++L+TS G+M H +AR + +GG Sbjct: 6 LADAMSTIKNAENVGKPECIIKPASKLIAMTLKVMADLGYIGEFEFIDDGKSGMFKVKLLGRINRCGVIKPRFAIKVAELEKWERRFLPARNFGVLILSTSQGVMPHTDARARGIGG 122 The following BLAST results are available for this feature:
BLAST of GE213153 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >GE213153 ID=GE213153; Name=GE213153; organism=Citrus sinensis; type=EST; length=465bpback to top |