GE213153
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GE213153 vs. ExPASy Swiss-Prot
Match: RS8_SULTO (30S ribosomal protein S8P OS=Sulfolobus tokodaii GN=rps8p PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.049e-28 Identity = 59/126 (46.83%), Postives = 91/126 (72.22%), Query Frame = -3 Query: 29 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKE---IEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGG 397 MV ++ L +AL ++YN E R +Q +I P+SK+II L MQK GYIGEFE++DD R+GKIVV+L GR+NKCG I+PR+ + K+ + + R LPS++ G ++++T+ G+M H++A R+ +GG Sbjct: 1 MVNLNPLANALTTIYNNEMRRNKQAIIMPASKLIINVLRAMQKEGYIGEFEFIDDGRSGKIVVQLLGRINKCGPIAPRYPLKYKDLLTLPDYVRRYLPSKEIGVLIISTNKGVMTHKDAIRERIGG 126
BLAST of GE213153 vs. ExPASy Swiss-Prot
Match: RS8_KORCO (30S ribosomal protein S8P OS=Korarchaeum cryptofilum (strain OPF8) GN=rps8p PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 1.049e-28 Identity = 61/123 (49.59%), Postives = 82/123 (66.67%), Query Frame = -3 Query: 29 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGG 397 M R+ L DA+ ++ N GKR+V+I +SK+I K L V+++HGYI EFEYVDD R GK VV LNGR+NK GVI PRF V V E W LP+ G I+++T+ G+M H EA+ + +GG Sbjct: 1 MTRLDPLADAMSTLTNGSMLGKREVVINIASKLIGKVLKVLKEHGYIDEFEYVDDGRFGKYVVRLNGRINKAGVIKPRFPVKVGEFSRWEKIYLPAENVGLIIVSTNQGVMTHREAKERGIGG 123
BLAST of GE213153 vs. ExPASy Swiss-Prot
Match: RS8_HYPBU (30S ribosomal protein S8P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rps8p PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 1.370e-28 Identity = 62/126 (49.21%), Postives = 85/126 (67.46%), Query Frame = -3 Query: 29 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEI---EGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGG 397 MV + L +A+ ++ NAE R K +V+I P+SK+I L VMQ+ GYIGEFEY+DD R GKI V L GR+NK GVI PRF V K++ W + LPSR G ++++TS G+M H EA ++ +GG Sbjct: 1 MVMLDTLANAMAAIVNAEMRAKPEVIIMPASKLIANVLRVMQREGYIGEFEYIDDGRWGKIRVRLLGRINKAGVIKPRFSVKYKDLIRMPDWLRKYLPSRDIGILIISTSQGVMSHREAIQRRIGG 126
BLAST of GE213153 vs. ExPASy Swiss-Prot
Match: RS8_METPE (30S ribosomal protein S8P OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=rps8p PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 3.987e-28 Identity = 54/125 (43.20%), Postives = 85/125 (68.00%), Query Frame = -3 Query: 23 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKV 397 M R + + DA+ ++ NA GK + ++ PSSK++ L +MQ GYIG F+ +DD R G+ V L+GR+NKCG I+PR+ VG+ E+E W R LP + FG ++L+TS G++ H +AR+ +GG++ Sbjct: 1 MSRQNTIADAMSALKNAGDCGKPECILEPSSKLLGAMLRIMQDAGYIGSFDMIDDGRGGQFRVHLSGRINKCGAITPRYSVGLDELEYWETRYLPGKNFGLLILSTSRGVLTHNQARQNGIGGEL 125
BLAST of GE213153 vs. ExPASy Swiss-Prot
Match: RS8_METBF (30S ribosomal protein S8P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rps8p PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 3.987e-28 Identity = 61/125 (48.80%), Postives = 83/125 (66.40%), Query Frame = -3 Query: 23 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKV 397 MV + L +AL ++ NAE GK +IRP+SK I L VMQ GYIGEFE++DD +AG V L GR+NKCG I PR+ VG E W + LP++ FG +++TTS+G+M EAR K +GG++ Sbjct: 1 MVLLDPLANALSTIKNAEAIGKSSCIIRPASKNIGNVLKVMQDLGYIGEFEFIDDGKAGIYSVTLVGRVNKCGAIKPRYSVGTGSFERWEKQFLPAKNFGALIITTSSGVMSQYEAREKKIGGQL 125
BLAST of GE213153 vs. ExPASy Swiss-Prot
Match: RS8_METIG (30S ribosomal protein S8P OS=Methanococcus igneus GN=rps8p PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 5.208e-28 Identity = 59/119 (49.58%), Postives = 83/119 (69.75%), Query Frame = -3 Query: 23 LNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKV 379 L +AL + N E+ GK+ I+P+SK+I + L VMQ HGYIGEFE+++D RAG VEL G++NKCG I PR+ V E E + R LP+R FG ++++TS GIM H EA+ K +GG++ Sbjct: 7 LANALNHLTNCERVGKKVFYIKPASKLIGRVLKVMQDHGYIGEFEFIEDGRAGIFKVELIGKINKCGAIKPRYAVKKHEFEKFEKRYLPARDFGLLIVSTSQGIMTHYEAKEKGIGGRL 125
BLAST of GE213153 vs. ExPASy Swiss-Prot
Match: RS8_PYRIL (30S ribosomal protein S8P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps8p PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 6.802e-28 Identity = 58/123 (47.15%), Postives = 86/123 (69.92%), Query Frame = -3 Query: 29 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGG 397 MV + +L++AL + NAE GK+QV+I P +K+I L V+Q++GY+GE EY+DD R GK VV+L G++N G I PR+ V +EI W + LP+RQ G +V++TS G+M H EA+ + +GG Sbjct: 1 MVMLDLLSNALIQIKNAEIMGKKQVVIWPVNKLIYHTLRVLQRYGYVGEIEYIDDGRGGKYVVQLLGKINDIGPIRPRYPVKYREIVQWEQKFLPARQIGILVISTSQGVMSHIEAKERKIGG 123
BLAST of GE213153 vs. ExPASy Swiss-Prot
Match: RS8_METLZ (30S ribosomal protein S8P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps8p PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 6.802e-28 Identity = 57/125 (45.60%), Postives = 85/125 (68.00%), Query Frame = -3 Query: 23 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKV 397 M + + + DA+ ++ NA GK V + P+S++ L VMQ++GYI FE +DD R G+ + L+G +NKCGVI+PRF V V+++E W R LP + FG I+LTTS G+M HE+AR+ VGG++ Sbjct: 1 MTKQNPIADAMSAIKNAGDTGKLAVTVEPASRLFGDMLKVMQEYGYITGFEKIDDGRGGQFQIALSGGINKCGVITPRFSVKVEDLESWEIRYLPGKGFGIIILTTSKGVMSHEQARKLGVGGEL 125
BLAST of GE213153 vs. ExPASy Swiss-Prot
Match: RS8_METMA (30S ribosomal protein S8P OS=Methanosarcina mazei GN=rps8p PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 8.883e-28 Identity = 60/125 (48.00%), Postives = 83/125 (66.40%), Query Frame = -3 Query: 23 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKV 397 MV + L +AL ++ NAE GK ++RP+SK I L VMQ GYIG+FE++DD +AG V L GR+NKCG I PR+ VG E W + LP++ FG ++LTTS+G+M EAR K +GG++ Sbjct: 1 MVLLDPLANALSTIKNAEAIGKSSCIVRPASKNIGNVLKVMQDLGYIGDFEFIDDGKAGIYSVTLVGRINKCGAIKPRYSVGTGSFERWEKQFLPAKNFGALILTTSSGVMSQYEARDKKIGGQL 125
BLAST of GE213153 vs. ExPASy Swiss-Prot
Match: RS8_METKA (30S ribosomal protein S8P OS=Methanopyrus kandleri GN=rps8p PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 8.883e-28 Identity = 57/125 (45.60%), Postives = 85/125 (68.00%), Query Frame = -3 Query: 23 MVRVSVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLLVMQKHGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTARLLPSRQFGYIVLTTSAGIMDHEEARRKNVGGKV 397 M + L DA+ ++ N E G ++ +I P+SK+I + L VMQ++GYIG FE++DD R+GK +V+L GR+N CGVI PR V E E W R LP+R FG +++TT G+M H EA+ + +GG++ Sbjct: 1 MTLMDPLADAMATIKNNEMVGNKECVIEPASKLIGRVLKVMQEYGYIGSFEFIDDGRSGKFLVKLVGRINDCGVIKPRHPVKKDEWEYWEQRYLPARDFGLLIVTTPEGVMSHYEAKERGIGGRL 125 The following BLAST results are available for this feature:
BLAST of GE213153 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >GE213153 ID=GE213153; Name=GE213153; organism=Citrus sinensis; type=EST; length=465bpback to top |