FE660222

Overview
NameFE660222
Unique NameFE660222
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length476
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FE660222 vs. ExPASy Swiss-Prot
Match: MUG89_SCHPO (Meiotically up-regulated gene 89 protein OS=Schizosaccharomyces pombe GN=mug89 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 8.179e-19
Identity = 59/145 (40.69%), Postives = 80/145 (55.17%), Query Frame = 3
Query:    3 YQLDNFYQNHRRYVKSRNDEQLKKRSKTSET---SQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSR---NKRQLTVNKNGIAWKSDRDHKFGKEVFPSNF---QNGTL-IGGAHLDESIP-LSKQEDLIVWMRTAALPTFRKL 404
            Y+L NF+QNHRRY KS +++QL+  + T++      C P +   D KP  PCGLIA SLFNDT++  R   +    T +   IAW SD+         P +     N  L     + + ++P LS  E+L VWMRTA LPTF KL
Sbjct:  152 YRLTNFFQNHRRYAKSVDEKQLQGVALTADEVKGGNCFPLEVNEDDKPYYPCGLIANSLFNDTFSSLRLLDDNSVYTFSTKNIAWASDKRRFLKTNYSPDDVAPPPNWVLRYPDGYTESNMPDLSTMENLQVWMRTAGLPTFSKL 296          
BLAST of FE660222 vs. ExPASy Swiss-Prot
Match: CC50B_HUMAN (Cell cycle control protein 50B OS=Homo sapiens GN=TMEM30B PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 5.301e-18
Identity = 59/172 (34.30%), Postives = 86/172 (50.00%), Query Frame = 3
Query:    3 YQLDNFYQNHRRYVKSRNDEQLK--KRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKR------QLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGAHLDESIPLSKQ--------------------------EDLIVWMRTAALPTFRKLYGKI 416
            Y+L NFYQN+RRY  SR+D QL     +     ++C P   +  G PI PCG IA SLFND+++    ++      ++ ++++GIAW +D         +   F+N  L+ G     S+ L+ Q                          +D +VWMRTAALPTFRKLY +I
Sbjct:  112 YELTNFYQNNRRYGVSRDDAQLSGLPSALRHPVNECAPYQRSAAGLPIAPCGAIANSLFNDSFSLWHQRQPGGPYVEVPLDRSGIAWWTD---------YHVKFRNPPLVNG-----SLALAFQGTAPPPNWRRPVYELSPDPNNTGFINQDFVVWMRTAALPTFRKLYARI 269          
BLAST of FE660222 vs. ExPASy Swiss-Prot
Match: CC50B_MOUSE (Cell cycle control protein 50B OS=Mus musculus GN=Tmem30b PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 6.924e-18
Identity = 57/167 (34.13%), Postives = 82/167 (49.10%), Query Frame = 3
Query:    3 YQLDNFYQNHRRYVKSRNDEQLKKRSKTSE--TSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKR------QLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGA---------------------HLDESIPLSKQEDLIVWMRTAALPTFRKLYGKI 416
            Y+L NFYQN+RRY  SR+D QL   +       ++C P     DG PI PCG IA SLFND+++    ++      ++ +++  IAW +D         +   F+N  L+ G+                       D +      +D +VWMRTAALPTFRKLY +I
Sbjct:  112 YELSNFYQNNRRYGVSRDDAQLSGLASALRHPANECAPYQFRSDGLPIAPCGAIANSLFNDSFSLWHQRQPSDPFVEVPLDRTAIAWWTD---------YHVKFRNPPLVNGSLALAFRGTAPPPNWHRPVYELSPDPNNTGFINQDFVVWMRTAALPTFRKLYARI 269          
BLAST of FE660222 vs. ExPASy Swiss-Prot
Match: CC50C_MOUSE (Cell cycle control protein 50C OS=Mus musculus GN=Tmem30c PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.542e-17
Identity = 59/157 (37.58%), Postives = 84/157 (53.50%), Query Frame = 3
Query:    3 YQLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRNKRQLT-----VNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGA----------HLDESIPLSK---QEDLIVWMRTAALPTFRKLYGKIE 419
            Y+L  FYQN  +Y+ SR++ QL  +    +T+ C+P   + +  PI+PCG IA S+FNDT T S N    T     + K+G+ W +D+  KF +    SNF   T  G +           LD   P +     ED IVWMRTAA PTF+ LY +++
Sbjct:  108 YKLYGFYQNLYQYILSRSNSQLVGKD-IWDTTNCDPFQVSHNDTPIIPCGAIANSIFNDTITLSYNLNSSTQIEVPMLKSGLTWWTDKYVKF-RNPRSSNF-TSTFAGSSKPLHWAKPIYELDLDDPENNAFLNEDFIVWMRTAAFPTFKTLYRRLK 261          
BLAST of FE660222 vs. ExPASy Swiss-Prot
Match: YNI7_SCHPO (Uncharacterized protein C11B10.07c OS=Schizosaccharomyces pombe GN=SPBC11B10.07c PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.436e-17
Identity = 56/154 (36.36%), Postives = 80/154 (51.95%), Query Frame = 3
Query:    3 YQLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQ----CEPEDTTPDGKPIVPCGLIAWSLFNDTYT---------FSRNKRQLTVNKNGIAWKSDRD------HKFGKEVFPSNFQNGTLIGGAHLDESIP-LSKQEDLIVWMRTAALPTFRKL 404
            Y+L NFYQNHRRY  S +  QL   ++T    +    C+P +   +GKP  PCG+IA SLFND+Y+          S +     +  NG AW  DR+      +   + V P N+    +    + D++IP +S  +   +WMR AALPTF KL
Sbjct:  129 YRLKNFYQNHRRYTVSADMFQLLGEARTVAQLKSYGFCKPLEANEEGKPYYPCGIIANSLFNDSYSSLLRYESFDSSNSLGLYNMTTNGTAWPEDRERYKKTKYNASQIVPPPNW--AKMFPNGYTDDNIPDVSTWDAFQIWMRAAALPTFSKL 280          
BLAST of FE660222 vs. ExPASy Swiss-Prot
Match: YN8S_YEAST (Uncharacterized protein YNR048W OS=Saccharomyces cerevisiae GN=YNR048W PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 3.436e-17
Identity = 63/170 (37.06%), Postives = 87/170 (51.18%), Query Frame = 3
Query:    3 YQLDNFYQNHRRYVKSRNDEQLKKRSKTSET--SQCEPEDTTPDGKPIVPCGLIAWSLFNDTY----TFSRNKRQLTVNKNGIAWKSDRDHKFGKEVF-------PSNFQNGTLIGGAHLDESIP-LSKQEDLIVWMRTAALPTFRKLYGKIEVDLEENDIIDVILENNY 470
            Y+L NF QN+R YV+S + +QLK ++         C+P  T  + K I PCGLIA S+FNDT+    T   +     +   GIAW +D  H++GK  +       P N+    L    + D++IP L   E   +WMRTAALP F KL  K E +     I    +E NY
Sbjct:  144 YRLTNFNQNYREYVQSLDLDQLKGKALIGNDLDPNCDPLRTV-ENKTIFPCGLIANSMFNDTFGTTLTGVNDTADYLLTTKGIAWDTD-SHRYGKTEYNASDIVPPPNW--AKLFPNGYTDDNIPDLQNWEQFKIWMRTAALPNFYKLAMKNETNGLGKGIYIADIELNY 309          
BLAST of FE660222 vs. ExPASy Swiss-Prot
Match: CC50C_MACFA (Cell cycle control protein 50C OS=Macaca fascicularis GN=TMEM30C PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 9.998e-17
Identity = 57/157 (36.31%), Postives = 80/157 (50.96%), Query Frame = 3
Query:    3 YQLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTYTFSRN-----KRQLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGA-----------HLDESIPLSK---QEDLIVWMRTAALPTFRKLYGKI 416
            Y+L  FYQN  RYV+SR++ QL  +        C P   + +  PIVPCG IA S+FNDT   S N     + ++ + K+G+ W +D+  KF     PS+        G             LD+  P +     +D IVWMR AA PTF+KLYG++
Sbjct:  108 YKLYGFYQNLYRYVRSRSNRQLVGKD-VKAVEDCAPFKMSDNKTPIVPCGAIANSMFNDTIILSHNINSSVQIKVPMLKSGLTWWTDKYVKFQN---PSSKNLADEFRGTTKPPNWPKPIYDLDKKDPRNNGFLNDDFIVWMRAAAFPTFKKLYGRL 260          
BLAST of FE660222 vs. ExPASy Swiss-Prot
Match: CC50C_BOVIN (Cell cycle control protein 50C OS=Bos taurus GN=TMEM30C PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 2.463e-15
Identity = 56/156 (35.90%), Postives = 81/156 (51.92%), Query Frame = 3
Query:    3 YQLDNFYQNHRRYVKSRNDEQLKKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDT----YTFSRNKR-QLTVNKNGIAWKSDRDHKFGKEVFPSNFQNGTLIGGA----------HLDESIPLSK---QEDLIVWMRTAALPTFRKLYGKI 416
            Y+L  FYQN  RY+ SR++ QL   +   +   C P  T+ +G PI PCG IA S+FNDT    Y F+ +   ++ + +   AW +D+  KF    F +   +    G A           LDE+ P +     +D IVWMRTAA P F+KLY ++
Sbjct:  108 YKLYGFYQNLYRYILSRSNIQLVG-ADVKDVRNCAPFRTSDNGLPIAPCGAIANSMFNDTIVLWYNFNSSTHIRVPMVRTETAWWTDKYVKFQNPAFQN--LSSAFAGTAKPPNWPKPVYELDENDPGNNGFINDDFIVWMRTAAFPNFKKLYRRL 260          
BLAST of FE660222 vs. ExPASy Swiss-Prot
Match: CDC50_YEAST (Cell division control protein 50 OS=Saccharomyces cerevisiae GN=CDC50 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.035e-13
Identity = 56/153 (36.60%), Postives = 79/153 (51.63%), Query Frame = 3
Query:    3 YQLDNFYQNHRRYVKSRNDEQL--KKRSKTSETSQCEPEDTTPDGKPIVPCGLIAWSLFNDTY----TFSRNKRQLTVNKNGIAWKSDRDHKFGKEVF-------PSNFQNGTLIGGAHLDESIP-LSKQEDLIVWMRTAALPTFRKLYGKIE 419
            Y++ NFYQNHRRYV+S + +Q+  +   K    + C P  +  D K I PCGLIA S+FNDT+    +   +     +    I+W  DR H+F    +       P N+      G  + DE++P +   E+  VWMRTAA P F KL  K E
Sbjct:  141 YKITNFYQNHRRYVQSFDTKQILGEPIKKDDLDTSCSPIRSRED-KIIYPCGLIANSMFNDTFSQVLSGIDDTEDYNLTNKHISWSIDR-HRFKTTKYNASDIVPPPNWMKKYPDG--YTDENLPDIHTWEEFQVWMRTAAFPKFYKLTLKNE 289          
The following BLAST results are available for this feature:
BLAST of FE660222 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
MUG89_SCHPO8.179e-1940.69Meiotically up-regulated gene 89 protein OS=Schizo... [more]
CC50B_HUMAN5.301e-1834.30Cell cycle control protein 50B OS=Homo sapiens GN=... [more]
CC50B_MOUSE6.924e-1834.13Cell cycle control protein 50B OS=Mus musculus GN=... [more]
CC50C_MOUSE1.542e-1737.58Cell cycle control protein 50C OS=Mus musculus GN=... [more]
YNI7_SCHPO3.436e-1736.36Uncharacterized protein C11B10.07c OS=Schizosaccha... [more]
YN8S_YEAST3.436e-1737.06Uncharacterized protein YNR048W OS=Saccharomyces c... [more]
CC50C_MACFA9.998e-1736.31Cell cycle control protein 50C OS=Macaca fascicula... [more]
CC50C_BOVIN2.463e-1535.90Cell cycle control protein 50C OS=Bos taurus GN=TM... [more]
CDC50_YEAST1.035e-1336.60Cell division control protein 50 OS=Saccharomyces ... [more]

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Properties
Property NameValue
Genbank descriptionA20 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE660222 ID=FE660222; Name=FE660222; organism=Citrus sinensis; type=EST; length=476bp
ACTATCAACTCGATAACTTCTACCAGAATCATCGCAGATATGTTAAGAGC
CGAAATGATGAGCAGTTGAAAAAACGGAGTAAAACAAGTGAAACATCTCA
GTGTGAGCCCGAAGATACCACCCCAGATGGAAAGCCCATTGTCCCTTGTG
GCCTTATTGCTTGGAGTTTGTTTAATGATACATACACTTTTTCTCGCAAC
AAGAGACAGTTGACAGTGAACAAGAACGGTATCGCTTGGAAGAGTGATAG
GGATCACAAGTTTGGCAAAGAAGTTTTCCCTAGTAACTTCCAAAATGGGA
CTCTGATAGGTGGTGCACATCTTGATGAATCCATACCATTGAGTAAGCAA
GAGGACCTTATAGTTTGGATGCGGACAGCAGCTTTGCCCACTTTTAGGAA
GCTGTATGGGAAAATAGAGGTGGATCTTGAAGAGAATGATATTATCGATG
TGATATTGGAAAACAACTACAACACG
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