FE659327

Overview
NameFE659327
Unique NameFE659327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length489
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP_ASHGO (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ashbya gossypii GN=PAB1 PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 2.897e-46
Identity = 87/160 (54.37%), Postives = 128/160 (80.00%), Query Frame = 1
Query:    1 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKF 474
            +GNI+IKNL  +ID+K+LH+TFS+FGNILSCK+ATD +G S+GFGFV FEN+  A++AI+ ++GML+ND++V+V   + K++R++    +K KF NV+VKN+D+ T+ E+ +++FG+YG ITSAV+ +D +GK + FGFVNFE+   AAKAVD LN  +F
Sbjct:  125 SGNIYIKNLHPAIDNKSLHETFSTFGNILSCKVATDENGVSRGFGFVHFENESDARDAIEAVDGMLMNDQEVYVALHVSKKDRQSKLEEVKAKFTNVYVKNIDQETSQEEFEELFGKYGKITSAVLEKDSEGKLRGFGFVNFEDHAAAAKAVDELNELEF 284          

HSP 2 Score: 117.472 bits (293), Expect = 3.330e-26
Identity = 64/165 (38.79%), Postives = 95/165 (57.58%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER-------------ETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALN 462
            N+++KN+D+    +   + F  +G I S  +  D  G+ +GFGFV FE+  +A  A+D+LN +    ++++VG   +K ER             E +A K +  N+FVKNLD+S  DE LK+ F  +GTITSA VMRD  G S+ FGFV F   ++A KA+   N
Sbjct:  220 NVYVKNIDQETSQEEFEELFGKYGKITSAVLEKDSEGKLRGFGFVNFEDHAAAAKAVDELNELEFKGQKLYVGRAQKKYERLQELKKQYEAARLEKLA-KYQGVNLFVKNLDDSIDDEKLKEEFAPFGTITSAKVMRDETGNSRGFGFVCFSTPEEATKAITEKN 383          

HSP 3 Score: 90.8929 bits (224), Expect = 3.338e-18
Identity = 49/161 (30.43%), Postives = 88/161 (54.66%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486
            ++++  L+ ++    L+D FS  G++ S ++  D  +  S G+ +V F + E+   AI++LN  LI  K   +       +R+    K    N+++KNL  +  ++ L + F  +G I S  V  D +G S+ FGFV+FEN  DA  A++A++G   +D+E
Sbjct:   39 SLYVGELEPTVSEALLYDIFSPIGSVSSIRVCRDAITNTSLGYAYVNFHDHEAGPKAIEQLNYTLIKGKPCRI----MWSQRDPSLRKKGSGNIYIKNLHPAIDNKSLHETFSTFGNILSCKVATDENGVSRGFGFVHFENESDARDAIEAVDGMLMNDQE 195          

HSP 4 Score: 70.8626 bits (172), Expect = 3.575e-12
Identity = 35/81 (43.21%), Postives = 49/81 (60.49%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER 249
            N+F+KNLD SID + L + F+ FG I S K+  D +G S+GFGFV F   E A  AI + N  ++  K ++V    RK+ R
Sbjct:  323 NLFVKNLDDSIDDEKLKEEFAPFGTITSAKVMRDETGNSRGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKEVR 403          
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP_DROME (Polyadenylate-binding protein OS=Drosophila melanogaster GN=pAbp PE=1 SV=3)

HSP 1 Score: 183.341 bits (464), Expect = 4.942e-46
Identity = 94/157 (59.87%), Postives = 117/157 (74.52%), Query Frame = 1
Query:    4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE-TVAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGK 468
            GN+FIKNLD++ID+KA++DTFS+FGNILSCK+ATD  G SKG+GFV FE +E+A  +IDK+NGML+N K+V+VG F+ ++ERE  +  K K F NV+VKN  E   DE LK+ F  YG ITS  VM   DGKSK FGFV FE  + A  AV ALNGK
Sbjct:   90 GNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQALNGK 246          

HSP 2 Score: 116.316 bits (290), Expect = 7.419e-26
Identity = 66/168 (39.29%), Postives = 96/168 (57.14%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLIND-KQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGK 468
            N+++KN  +  D + L + F  +G I S K+ +   G+SKGFGFV FE  E+A+ A+  LNG  + + K ++V    +K ER+   +K KF              N++VKNLD++  D+ L+  F  YG ITSA VM D +G+SK FGFV F    +A  AV  LNG+
Sbjct:  184 NVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQ-ELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEEGRSKGFGFVCFNAASEATCAVTELNGR 350          

HSP 3 Score: 85.8853 bits (211), Expect = 1.074e-16
Identity = 46/154 (29.87%), Postives = 85/154 (55.19%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNG 465
            ++++ +L + ++   L D FSS G +LS ++  D  + +S G+ +V F+    A+ A+D +N  L+ +K + +       +R+    ++   NVF+KNLD +  ++ +   F  +G I S  V  D  G SK +GFV+FE  + A  ++D +NG
Sbjct:    3 SLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALDTMNFDLVRNKPIRI----MWSQRDPSLRRSGVGNVFIKNLDRAIDNKAIYDTFSAFGNILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNG 152          

HSP 4 Score: 77.0258 bits (188), Expect = 4.988e-14
Identity = 37/82 (45.12%), Postives = 52/82 (63.41%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 252
            N+++KNLD +ID   L   FS +GNI S K+ TD  G+SKGFGFV F     A  A+ +LNG ++  K ++V    RK+ER+
Sbjct:  288 NLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEEGRSKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALAQRKEERK 369          
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP4_HUMAN (Polyadenylate-binding protein 4 OS=Homo sapiens GN=PABPC4 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 4.942e-46
Identity = 91/162 (56.17%), Postives = 122/162 (75.31%), Query Frame = 1
Query:    4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET-VAIKTK-FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDR 483
            GN+FIKNLDKSID+KAL+DTFS+FGNILSCK+  D +G SKG+ FV FE +E+A  AI+K+NGML+ND++VFVG F  ++ERE  +  K K F NV++KN  E   DE LK++F ++G   S  VMRD +GKSK FGFV++E  +DA KAV+ +NGK+   +
Sbjct:   99 GNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGK 259          

HSP 2 Score: 134.42 bits (337), Expect = 2.633e-31
Identity = 71/167 (42.51%), Postives = 106/167 (63.47%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGK 468
            N++IKN  + +D ++L + FS FG  LS K+  D +G+SKGFGFV +E  E A  A++++NG  I+ K +FVG   +K ER+   +K KF              N+++KNLD++  DE L+K F  +G+ITSA VM + DG+SK FGFV F + ++A KAV  +NG+
Sbjct:  192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQ-AELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGR 356          

HSP 3 Score: 83.5741 bits (205), Expect = 5.329e-16
Identity = 49/161 (30.43%), Postives = 89/161 (55.28%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486
            ++++ +L   +    L++ FS  G +LS ++  D  + +S G+ +V F+    A+ A+D +N  +I  K + +       +R+    K+   NVF+KNLD+S  ++ L   F  +G I S  V+ D +G SK + FV+FE  + A KA++ +NG   +DR+
Sbjct:   12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRI----MWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRK 167          

HSP 4 Score: 73.9442 bits (180), Expect = 4.223e-13
Identity = 36/82 (43.90%), Postives = 54/82 (65.85%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 252
            N++IKNLD +ID + L   FS FG+I S K+  +  G+SKGFGFV F + E A  A+ ++NG ++  K ++V    RK+ER+
Sbjct:  295 NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVMLE-DGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERK 375          
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP_SCHPO (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Schizosaccharomyces pombe GN=pab1 PE=1 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 8.430e-46
Identity = 85/164 (51.83%), Postives = 124/164 (75.61%), Query Frame = 1
Query:    1 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486
            TGN+FIKNLD +ID+KALHDTFS+FG ILSCK+A D  G +KG+GFV F++ ESA  AI+ +NGML+NDK+V+VGH + ++ER++   A+K  F NV++KNLD   T+++   +FG++G ITS  +++D + K + FGFVN+ N + A KAVD LN K++  ++
Sbjct:  167 TGNVFIKNLDPAIDNKALHDTFSAFGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKVYVGHHVSRRERQSKVEALKANFTNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPRGFGFVNYANHECAQKAVDELNDKEYKGKK 330          

HSP 2 Score: 121.324 bits (303), Expect = 2.306e-27
Identity = 68/164 (41.46%), Postives = 91/164 (55.49%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK-------TKFN-----NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALN 462
            N++IKNLD  I  +   D F  FG I S  +  D + + +GFGFV + N E AQ A+D+LN      K+++VG   +K ERE    K        K N     N+F+KNL +   DE LK  F  +GTITSA +M D  GKSK FGFV +   ++A KAV  +N
Sbjct:  262 NVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPRGFGFVNYANHECAQKAVDELNDKEYKGKKLYVGRAQKKHEREEELRKRYEQMKLEKMNKYQGVNLFIKNLQDEVDDERLKAEFSAFGTITSAKIMTDEQGKSKGFGFVCYTTPEEANKAVTEMN 425          

HSP 3 Score: 88.1965 bits (217), Expect = 2.164e-17
Identity = 49/163 (30.06%), Postives = 88/163 (53.99%), Query Frame = 1
Query:    1 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486
            + ++++  LD S+    L + F+S G + S ++  D  + +S G+ +V F N E  + A+D+LN  LI  +   +       +R+    K    NVF+KNLD +  ++ L   F  +G I S  V  D  G +K +GFV+F++V+ A  A++ +NG   +D++
Sbjct:   79 SASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEKALDELNYTLIKGRPCRI----MWSQRDPSLRKMGTGNVFIKNLDPAIDNKALHDTFSAFGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKK 237          

HSP 4 Score: 70.8626 bits (172), Expect = 3.575e-12
Identity = 35/83 (42.17%), Postives = 50/83 (60.24%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 255
            N+FIKNL   +D + L   FS+FG I S KI TD  G+SKGFGFV +   E A  A+ ++N  ++  K ++V    RK+ R +
Sbjct:  365 NLFIKNLQDEVDDERLKAEFSAFGTITSAKIMTDEQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPLYVALAQRKEVRRS 447          
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP_PHANO (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Phaeosphaeria nodorum GN=PAB1 PE=3 SV=3)

HSP 1 Score: 182.57 bits (462), Expect = 8.430e-46
Identity = 89/159 (55.97%), Postives = 119/159 (74.84%), Query Frame = 1
Query:    4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKF 474
            GN+FIKNLD +ID+KALHDTF++FGNILSCK+A D  G SKG+GFV +E  E+A NAI  +NGML+N+K+VFVGH + K+ER  +   +K  F N++VKN+D   TDED +++F ++G ITSA + RD  GKS+ FGFVN+   + AA AVD LN  +F
Sbjct:  136 GNVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKERMSKFEEMKANFTNIYVKNIDLDVTDEDFRELFEKHGDITSASIARDDQGKSRGFGFVNYIRHEAAAVAVDHLNDIEF 294          

HSP 2 Score: 98.5969 bits (244), Expect = 1.601e-20
Identity = 69/224 (30.80%), Postives = 103/224 (45.98%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK----------TKFN--NVFVKNLDESTTDEDLKKIFGEYGTITSA-VVMRD-----------------------------------------GD-----------GKSKCFGFVNFENVDDAAKAVDALNGKKFDDR 483
            NI++KN+D  +  +   + F   G+I S  IA D  G+S+GFGFV +   E+A  A+D LN +    ++++VG   +K ERE    K          +K+   N+++KNL++   DE L+ +F  +GTITSA V++RD                                         GD           GKSK FGFV F N D+A KAV  +N K  + +
Sbjct:  230 NIYVKNIDLDVTDEDFRELFEKHGDITSASIARDDQGKSRGFGFVNYIRHEAAAVAVDHLNDIEFKGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLNDDVDDEKLRDMFTPFGTITSAKVILRDEEKKDEEEKEVKEEKKEDEKKEDEEAKEGSSSEQNGEDTKAGDKVTIKGEKKILGKSKGFGFVCFSNPDEATKAVTEMNQKMIEGK 453          

HSP 3 Score: 87.0409 bits (214), Expect = 4.820e-17
Identity = 47/163 (28.83%), Postives = 87/163 (53.37%), Query Frame = 1
Query:    1 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486
            + ++++  LD S+    L + FSS G + S ++  D  + +S G+ +V + + E  + A+++LN  +I  K   +       +R+    KT   NVF+KNLD +  ++ L   F  +G I S  V +D  G SK +GFV++E  + A  A+  +NG   ++++
Sbjct:   47 SASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALEELNYTVIKGKPCRI----MWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKK 205          
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP_USTMA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Ustilago maydis GN=PAB1 PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 1.878e-45
Identity = 89/159 (55.97%), Postives = 122/159 (76.73%), Query Frame = 1
Query:    4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK--FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKF 474
            GNIFIKNLD  ID+KALHDTF++FGNILSCK+AT+ +G S G+GFV +E  E+A+ AI  +NGML+NDK+V+VGH + ++ER+    +T+  F NV+ KN+D   TD++ +K+F ++G ITS V+ RD DGKSK FGFVNFE+ ++A KAVD L+   F
Sbjct:  135 GNIFIKNLDAGIDNKALHDTFAAFGNILSCKVATNETG-SLGYGFVHYETAEAAEAAIKHVNGMLLNDKKVYVGHHIPRKERQAKIEETRANFTNVYAKNVDPEVTDDEFEKLFTKFGKITSCVLQRDEDGKSKGFGFVNFEDHNEAQKAVDELHDSDF 292          

HSP 2 Score: 116.701 bits (291), Expect = 5.681e-26
Identity = 64/171 (37.43%), Postives = 95/171 (55.56%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT----------KFN--NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDR 483
            N++ KN+D  +        F+ FG I SC +  D  G+SKGFGFV FE+   AQ A+D+L+      +++FV    +K ERE    ++          KF   N+++KN+ ES  DE L++ F  +G ITS  +MR   G S+ FGFV +   ++A KAV  +NGK  D+R
Sbjct:  228 NVYAKNVDPEVTDDEFEKLFTKFGKITSCVLQRDEDGKSKGFGFVNFEDHNEAQKAVDELHDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIPESYDDERLREEFAPFGAITSCKIMRAPSGVSRGFGFVCYSAPEEANKAVSEMNGKMLDNR 398          

HSP 3 Score: 74.7146 bits (182), Expect = 2.476e-13
Identity = 44/161 (27.33%), Postives = 82/161 (50.93%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486
            ++++  LD S+    L + FS  G + S ++  D  + +S G+ +V F N    + A+++LN  LI ++   +       +R+    +T   N+F+KNLD    ++ L   F  +G I S  V  +  G S  +GFV++E  + A  A+  +NG   +D++
Sbjct:   48 SLYVGELDPSVTEAMLFEIFSMIGTVASIRVCRDAVTRRSLGYAYVNFLNAADGERAMEQLNYSLIRNRPCRI----MWSQRDPALRRTGQGNIFIKNLDAGIDNKALHDTFAAFGNILSCKVATNETG-SLGYGFVHYETAEAAEAAIKHVNGMLLNDKK 203          

HSP 4 Score: 67.781 bits (164), Expect = 3.026e-11
Identity = 31/81 (38.27%), Postives = 51/81 (62.96%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER 249
            N+++KN+ +S D + L + F+ FG I SCKI    SG S+GFGFV +   E A  A+ ++NG +++++ ++V    RK  R
Sbjct:  331 NLYLKNIPESYDDERLREEFAPFGAITSCKIMRAPSGVSRGFGFVCYSAPEEANKAVSEMNGKMLDNRPLYVALAQRKDVR 411          
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP_CANAL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida albicans GN=PAB1 PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 1.878e-45
Identity = 88/163 (53.99%), Postives = 123/163 (75.46%), Query Frame = 1
Query:    4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486
            GNIFIKNL  +ID+KALHDTFS+FG ILSCK+ATD  GQSK FGFV +E  E+A+ AI+ +NGML+ND++VFVG  + K++RE+    +K  F N++VKN+D + ++E  +K+F  +G ITS  + +D DGKSK FGFVNFE+ + A KAV+ LN K+ + ++
Sbjct:  140 GNIFIKNLHPAIDNKALHDTFSAFGKILSCKVATDEFGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISKKDRESKFEEMKANFTNIYVKNIDLNYSEESFEKLFSPFGKITSIYLEKDQDGKSKGFGFVNFEDHESAVKAVEELNDKEINGQK 302          

HSP 2 Score: 124.02 bits (310), Expect = 3.558e-28
Identity = 70/171 (40.94%), Postives = 103/171 (60.23%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--------ETVAI----KTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDR 483
            NI++KN+D +   ++    FS FG I S  +  D  G+SKGFGFV FE+ ESA  A+++LN   IN ++++VG   +K+ER        E V +    K +  N+FVKNLD++   E L++ F  +GTITSA VM D  GKSK FGFV F   ++A KA+  +N +  + +
Sbjct:  234 NIYVKNIDLNYSEESFEKLFSPFGKITSIYLEKDQDGKSKGFGFVNFEDHESAVKAVEELNDKEINGQKIYVGRAQKKRERLEELKKQYEAVRLEKLAKYQGVNLFVKNLDDTIDSEKLEEEFKPFGTITSAKVMVDEAGKSKGFGFVCFTTPEEATKAITEMNTRMINGK 404          

HSP 3 Score: 87.4261 bits (215), Expect = 3.691e-17
Identity = 48/163 (29.45%), Postives = 87/163 (53.37%), Query Frame = 1
Query:    1 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486
            + ++++  L+ S++   L + FS  G + S ++  D  S +S G+ +V +   E  + AI++LN   I  +   +       +R+  A ++   N+F+KNL  +  ++ L   F  +G I S  V  D  G+SKCFGFV++E  + A  A++ +NG   +DRE
Sbjct:   51 SASLYVGELNPSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKYEDGEKAIEELNYNPIEGRPCRI----MWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILSCKVATDEFGQSKCFGFVHYETAEAAEAAIENVNGMLLNDRE 209          

HSP 4 Score: 75.485 bits (184), Expect = 1.451e-13
Identity = 37/83 (44.58%), Postives = 51/83 (61.45%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 255
            N+F+KNLD +ID + L + F  FG I S K+  D +G+SKGFGFV F   E A  AI ++N  +IN K ++V    RK  R +
Sbjct:  337 NLFVKNLDDTIDSEKLEEEFKPFGTITSAKVMVDEAGKSKGFGFVCFTTPEEATKAITEMNTRMINGKPLYVALAQRKDVRRS 419          
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP_CHAGB (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Chaetomium globosum GN=PAB1 PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 2.453e-45
Identity = 84/159 (52.83%), Postives = 121/159 (76.10%), Query Frame = 1
Query:    4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKF 474
            GN+FIKNLD +ID+KALHDTF++FGNILSCK+A D +G SKG+GFV +E  E+A  AI  +N ML+N+K+V+VG+ + K++R++    +K  F N++VKN+    TDE+ + +F +YG +TS+ + RD +GKS+ FGFVNF   + AAKAV+ LNGK+F
Sbjct:  153 GNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNNMLLNEKKVYVGYHIPKKDRQSKFEEMKANFTNIYVKNISLEATDEEFRDLFAKYGDVTSSSLARDSEGKSRGFGFVNFTTHECAAKAVEELNGKEF 311          

HSP 2 Score: 107.842 bits (268), Expect = 2.639e-23
Identity = 70/216 (32.41%), Postives = 101/216 (46.76%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT-------KFN-----NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD------------------------------------------GD---GKSKCFGFVNFENVDDAAKAVDALNGKKFDDR 483
            NI++KN+      +   D F+ +G++ S  +A D  G+S+GFGFV F   E A  A+++LNG     + ++VG   +K ERE    K+       K N     N+++KNL +   D+ L+++F EYG ITSA VMRD                                          GD   GKSK FGFV F N DDA KAV  +N +  + +
Sbjct:  247 NIYVKNISLEATDEEFRDLFAKYGDVTSSSLARDSEGKSRGFGFVNFTTHECAAKAVEELNGKEFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLADDIDDDKLRQMFSEYGPITSAKVMRDAVTEGSAEEETEGKDKENKKEGEQAAEAEGEAEGAEKKTEKKGDRRLGKSKGFGFVCFSNPDDATKAVAEMNQRMIEGK 462          

HSP 3 Score: 83.1889 bits (204), Expect = 6.960e-16
Identity = 45/163 (27.61%), Postives = 88/163 (53.99%), Query Frame = 1
Query:    1 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486
            + ++++  LD S+    L + FS  G++ S ++  D  + +S G+ +V + +    + A+++LN  LI  +   +       +R+    KT   NVF+KNLD +  ++ L   F  +G I S  V +D +G SK +GFV++E  + AA+A+  +N    ++++
Sbjct:   64 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDTITRRSLGYAYVNYNSTSDGEKALEELNYTLIKGRPCRI----MWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNNMLLNEKK 222          
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PAP1L_HUMAN (Polyadenylate-binding protein 1-like OS=Homo sapiens GN=PABPC1L PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 4.184e-45
Identity = 90/162 (55.56%), Postives = 119/162 (73.46%), Query Frame = 1
Query:    4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDR 483
            GNIFIKNL+ SID+KAL+DTFS+FGNILSCK+A D  G S+GFGFV FE  E+AQ AI+ +NGML+ND++VFVGHF  ++ERE    A   +F N++VKNL     ++ L+ +F ++G + S  VMRD  G S+CFGFVNFE  ++A KAV  +NGK+   R
Sbjct:   99 GNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGR 259          

HSP 2 Score: 128.642 bits (322), Expect = 1.445e-29
Identity = 70/167 (41.92%), Postives = 100/167 (59.88%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGK 468
            NI++KNL   +D + L D FS FG +LS K+  D SG S+ FGFV FE  E AQ A+  +NG  ++ + ++ G   ++ ER+   +K +F              N++VKNLD+S  D+ L+K F  YG ITSA VM +G G SK FGFV F + ++A KAV  +NG+
Sbjct:  192 NIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQN-ELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGR 356          

HSP 3 Score: 80.1073 bits (196), Expect = 5.892e-15
Identity = 45/161 (27.95%), Postives = 88/161 (54.66%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486
            ++++ +L   +    L++ FS  G ILS ++  D  + +S G+ ++ F+    A+ A+D +N  ++  + + +       +R+    K+   N+F+KNL++S  ++ L   F  +G I S  V  D  G S+ FGFV+FE  + A +A++ +NG   +DR+
Sbjct:   12 SLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERALDTMNFEMLKGQPIRI----MWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRK 167          

HSP 4 Score: 76.2554 bits (186), Expect = 8.508e-14
Identity = 37/84 (44.05%), Postives = 54/84 (64.29%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 258
            N+++KNLD SID   L   FS +G I S K+ T+G G SKGFGFV F + E A  A+ ++NG ++  K ++V    RK+ER+ +
Sbjct:  295 NLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAI 377          
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP_DEBHA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Debaryomyces hansenii GN=PAB1 PE=3 SV=2)

HSP 1 Score: 180.259 bits (456), Expect = 4.184e-45
Identity = 88/163 (53.99%), Postives = 121/163 (74.23%), Query Frame = 1
Query:    4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486
            GNIFIKNL  +ID+KALHDTF++FG ILSCK+ATD  G SK FGFV +E  E+A+ AI+ +NGML+ND++V+VG  + K++RE+    +K  F NV+ KN+D   ++E+ KK+F  YG ITS  + +D +GKSK FGFVNFEN + A KAVD LN K+ + ++
Sbjct:  139 GNIFIKNLHPAIDNKALHDTFTAFGKILSCKVATDDMGISKCFGFVHYETAEAAEAAIENVNGMLLNDREVYVGKHISKKDRESKFEEMKANFTNVYAKNIDLDFSEEEFKKLFEAYGKITSIYLEKDHEGKSKGFGFVNFENHESAVKAVDELNDKEINGQK 301          

HSP 2 Score: 120.168 bits (300), Expect = 5.138e-27
Identity = 66/164 (40.24%), Postives = 95/164 (57.93%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALN 462
            N++ KN+D     +     F ++G I S  +  D  G+SKGFGFV FEN ESA  A+D+LN   IN ++++VG   +K+ER     K   N            N+F+KNLD++   E L++ F  +G+ITSA VM D  GKSK FGFV F + ++A KA+  +N
Sbjct:  233 NVYAKNIDLDFSEEEFKKLFEAYGKITSIYLEKDHEGKSKGFGFVNFENHESAVKAVDELNDKEINGQKIYVGRAQKKRERLEELKKQYENTRLEKLSKYQGVNLFIKNLDDTIDSEKLEEEFKPFGSITSARVMVDETGKSKGFGFVCFSSPEEATKAITEMN 396          

HSP 3 Score: 72.7886 bits (177), Expect = 9.407e-13
Identity = 36/83 (43.37%), Postives = 52/83 (62.65%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 255
            N+FIKNLD +ID + L + F  FG+I S ++  D +G+SKGFGFV F + E A  AI ++N  +I  K ++V    RK  R +
Sbjct:  336 NLFIKNLDDTIDSEKLEEEFKPFGSITSARVMVDETGKSKGFGFVCFSSPEEATKAITEMNQRMIYGKPLYVALAQRKDVRRS 418          
The following BLAST results are available for this feature:
BLAST of FE659327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 150
Match NameE-valueIdentityDescription
PABP_ASHGO2.897e-4654.38Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_DROME4.942e-4659.87Polyadenylate-binding protein OS=Drosophila melano... [more]
PABP4_HUMAN4.942e-4656.17Polyadenylate-binding protein 4 OS=Homo sapiens GN... [more]
PABP_SCHPO8.430e-4651.83Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_PHANO8.430e-4655.97Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_USTMA1.878e-4555.97Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_CANAL1.878e-4553.99Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP_CHAGB2.453e-4552.83Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PAP1L_HUMAN4.184e-4555.56Polyadenylate-binding protein 1-like OS=Homo sapie... [more]
PABP_DEBHA4.184e-4553.99Polyadenylate-binding protein, cytoplasmic and nuc... [more]

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Properties
Property NameValue
Genbank descriptionA141 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659327 ID=FE659327; Name=FE659327; organism=Citrus sinensis; type=EST; length=489bp
ACTGGGAACATATTTATCAAGAATTTGGACAAGTCTATTGATCACAAAGC
ATTACACGATACATTTTCTTCATTCGGAAACATTCTTTCTTGTAAGATAG
CTACTGATGGTTCTGGCCAGTCCAAAGGTTTCGGTTTTGTGCAATTTGAG
AACAAAGAATCTGCTCAAAATGCTATTGATAAGTTAAATGGCATGCTTAT
TAATGATAAACAAGTGTTCGTTGGGCACTTTCTTCGTAAGCAGGAAAGAG
AAACTGTAGCAATTAAAACAAAATTCAATAACGTATTTGTCAAAAACCTT
GATGAGTCAACTACAGATGAAGATTTGAAGAAAATTTTTGGTGAGTATGG
AACAATTACCAGTGCAGTAGTGATGAGGGATGGAGATGGAAAATCCAAGT
GTTTTGGATTTGTGAATTTTGAAAATGTAGATGATGCTGCCAAAGCTGTT
GATGCTCTTAATGGAAAGAAATTTGATGACAGAGAATGG
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