FE659327

Overview
NameFE659327
Unique NameFE659327
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length489
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP_MAGGR (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Magnaporthe grisea GN=PAB1 PE=3 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.217e-44
Identity = 84/160 (52.50%), Postives = 123/160 (76.88%), Query Frame = 1
Query:    4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGD-GKSKCFGFVNFENVDDAAKAVDALNGKKF 474
            GN+FIKNLD +ID+KALHDTF++FGNILSCK+A D +G SKG+GFV +E  E+A  AI  +NGML+N+K+V+VGH + K++R++    +K  F N++VKN++   TD++ + +F +YG +TS+ + RD + GKS+ FGFVNF + +DA+KAV  LN K+F
Sbjct:  149 GNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFDEMKANFTNIYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKSRGFGFVNFTSHEDASKAVQELNEKEF 308          

HSP 2 Score: 101.293 bits (251), Expect = 2.470e-21
Identity = 68/219 (31.05%), Postives = 102/219 (46.58%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV------------AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-----------------------------GD------------------GKSKCFGFVNFENVDDAAKAVDALNGKKFDDR 483
            NI++KN++  +        F  +G++ S  +A D  +G+S+GFGFV F + E A  A+ +LN    + + ++VG   +K ERE              A K +  N+++KNLD+   DE L+++F E+G ITSA VMRD                             GD                  GKSK FGFV F N DDA KAV  +N +  +++
Sbjct:  243 NIYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKSRGFGFVNFTSHEDASKAVQELNEKEFHGQNLYVGRAQKKHEREEELRKSYEAARQEKASKYQGVNLYIKNLDDEVDDEKLRQLFSEFGPITSAKVMRDSITEPGEEGESKEGEESEKNKENKPEEKEGDDSKPEEKEGEDSKSKSKLGKSKGFGFVCFANPDDATKAVAEMNQRMVNNK 461          

HSP 3 Score: 84.3445 bits (207), Expect = 3.124e-16
Identity = 45/163 (27.61%), Postives = 88/163 (53.99%), Query Frame = 1
Query:    1 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486
            + ++++  LD S+    L + FS  G++ S ++  D  + +S G+ +V +      + A+++LN  LI  +   +       +R+    KT   NVF+KNLD +  ++ L   F  +G I S  V +D +G SK +GFV++E  + A++A+  +NG   ++++
Sbjct:   60 SASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALEELNYTLIKGRPCRI----MWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKK 218          
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PAP1A_DICDI (Polyadenylate-binding protein 1-A OS=Dictyostelium discoideum GN=pabpc1A PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 6.041e-44
Identity = 88/157 (56.05%), Postives = 109/157 (69.43%), Query Frame = 1
Query:    4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKF 474
            GN+FIKNLDK IDHKAL+DTFS+FGNILSCK+ TD    SKGFGFV +E +ESA  AI K+NGM+IN ++VFVG F   +ER     + KF NVF KNL E    + LK++  +YG IT+  +M D  GKSK FGF NFE+ + A   V+  NGK F
Sbjct:   98 GNVFIKNLDKGIDHKALYDTFSAFGNILSCKVVTDDGNSSKGFGFVHYETQESADKAIAKVNGMMINGQKVFVGPFKSSKERGQ-PTEVKFTNVFFKNLSEDVGPDQLKELLQQYGEITNITIMADDKGKSKGFGFANFESAEAAKNVVENENGKIF 253          

HSP 2 Score: 120.939 bits (302), Expect = 3.012e-27
Identity = 60/160 (37.50%), Postives = 98/160 (61.25%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV---AIKTKFN--NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDG-KSKCFGFVNFENVDDAAKAVDALNGK 468
            N+F KNL + +    L +    +G I +  I  D  G+SKGFGF  FE+ E+A+N ++  NG + + K ++ G   +K ERE       +TK+   N+++KN+D+S  ++ L+++F ++GTITSA+VM+D     SK FGFV +   D+A +AV  +NG+
Sbjct:  189 NVFFKNLSEDVGPDQLKELLQQYGEITNITIMADDKGKSKGFGFANFESAEAAKNVVENENGKIFHGKPIYAGRAQKKIEREAELKHTFETKYQGVNLYIKNIDDSIDNDKLREVFSQFGTITSAIVMKDDKATTSKGFGFVCYTAPDEATRAVTEMNGR 348          

HSP 3 Score: 73.1738 bits (178), Expect = 7.203e-13
Identity = 43/156 (27.56%), Postives = 78/156 (50.00%), Query Frame = 1
Query:    1 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNG 465
            + ++++ +L   +  + L + F+  G + + ++  D  + +S  + +V + N   A+ A+D LN   I  K   +       +R+    K+   NVF+KNLD+    + L   F  +G I S  V+ D    SK FGFV++E  + A KA+  +NG
Sbjct:    9 SSSLYVGDLLPEVSEQHLFEIFNQVGLVSNIRVCRDTNTRRSLSYAYVNYYNGADAERALDTLNNTPIRGKACRI----MWSQRDPSLRKSGVGNVFIKNLDKGIDHKALYDTFSAFGNILSCKVVTDDGNSSKGFGFVHYETQESADKAIAKVNG 160          
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP_LODEL (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Lodderomyces elongisporus GN=PAB1 PE=3 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 7.890e-44
Identity = 85/163 (52.15%), Postives = 124/163 (76.07%), Query Frame = 1
Query:    4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486
            GNIFIKNL  +ID+KALHDTFS+FG ILS K+ATD  GQSK FGFV +E +E+AQ AI+ +NGML+ND++V+VG  + K++RE+    +K  + N++VKN+D + T+++ +++F  +G ITS  + +D +GKSK FGFVNFE  + AAKAV+ LN K+ + ++
Sbjct:  155 GNIFIKNLHPAIDNKALHDTFSAFGKILSVKVATDDLGQSKCFGFVHYETEEAAQAAIESVNGMLLNDREVYVGKHVSKKDRESKLEEMKANYTNIYVKNIDLAYTEKEFEELFAPFGKITSIYLEKDAEGKSKGFGFVNFEEHEAAAKAVEELNDKEINGQK 317          

HSP 2 Score: 124.79 bits (312), Expect = 2.086e-28
Identity = 68/165 (41.21%), Postives = 98/165 (59.39%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALN 462
            NI++KN+D +   K   + F+ FG I S  +  D  G+SKGFGFV FE  E+A  A+++LN   IN ++++VG   +K+ER T  +K ++              N+FVKNLDE    E L++ F  +GTITS+ VM D  GKSK FGFV F   ++A KA+  +N
Sbjct:  249 NIYVKNIDLAYTEKEFEELFAPFGKITSIYLEKDAEGKSKGFGFVNFEEHEAAAKAVEELNDKEINGQKIYVGRAQKKRER-TEELKKQYEAVRLEKLSKYQGVNLFVKNLDEQIDSEKLEEEFKPFGTITSSKVMVDDAGKSKGFGFVCFSTPEEATKAITEMN 412          

HSP 3 Score: 88.1965 bits (217), Expect = 2.164e-17
Identity = 47/163 (28.83%), Postives = 88/163 (53.99%), Query Frame = 1
Query:    1 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486
            + ++++  L+ S++   L + FS  G + S ++  D  S +S G+ +V +   E  + AI++LN   +  +   +       +R+  A ++   N+F+KNL  +  ++ L   F  +G I S  V  D  G+SKCFGFV++E  + A  A++++NG   +DRE
Sbjct:   66 SASLYVGELNPSVNEATLFEIFSPIGQVASIRVCRDAVSKKSLGYAYVNYHKLEDGEKAIEELNYTPVEGRPCRI----MWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILSVKVATDDLGQSKCFGFVHYETEEAAQAAIESVNGMLLNDRE 224          

HSP 4 Score: 75.8702 bits (185), Expect = 1.111e-13
Identity = 36/83 (43.37%), Postives = 51/83 (61.45%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 255
            N+F+KNLD+ ID + L + F  FG I S K+  D +G+SKGFGFV F   E A  AI ++N  ++N K ++V    RK  R +
Sbjct:  352 NLFVKNLDEQIDSEKLEEEFKPFGTITSSKVMVDDAGKSKGFGFVCFSTPEEATKAITEMNQRMVNGKPLYVALAQRKDVRRS 434          
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP3_HUMAN (Polyadenylate-binding protein 3 OS=Homo sapiens GN=PABPC3 PE=1 SV=2)

HSP 1 Score: 175.637 bits (444), Expect = 1.030e-43
Identity = 89/163 (54.60%), Postives = 118/163 (72.39%), Query Frame = 1
Query:    4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486
            GNIF+KNLDKSI++KAL+DT S+FGNILSC +  D +G SKG+GFV FE  E+A+ AI K+NGML+N ++VFVG F  ++ERE    A   +F NV++KN  E   DE LK +FG++G   S  VM D  GKSK FGFV+FE  +DA KAVD +NGK+ + ++
Sbjct:   99 GNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQ 260          

HSP 2 Score: 145.591 bits (366), Expect = 1.142e-34
Identity = 77/166 (46.39%), Postives = 106/166 (63.86%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT------------KFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGK 468
            N++IKN  + +D + L D F  FG  LS K+ TD SG+SKGFGFV FE  E AQ A+D++NG  +N KQ++VG   +K ER+T   +T            +  N++VKNLD+   DE L+K F  +GTITSA VM +G G+SK FGFV F + ++A KAV  +NG+
Sbjct:  192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGR 356          

HSP 3 Score: 80.1073 bits (196), Expect = 5.892e-15
Identity = 50/163 (30.67%), Postives = 89/163 (54.60%), Query Frame = 1
Query:    1 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486
            T ++++ +L   +    L++ FS  G ILS +I  D  +  S  + +V F++ + A++A+D +N  +I  K V +       +R+    K+   N+FVKNLD+S  ++ L      +G I S  V+ D +G SK +GFV+FE  + A +A+  +NG   + R+
Sbjct:   10 TASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQHTKDAEHALDTMNFDVIKGKPVRI----MWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFGNILSCNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRK 167          

HSP 4 Score: 74.7146 bits (182), Expect = 2.476e-13
Identity = 36/82 (43.90%), Postives = 53/82 (64.63%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERE 252
            N+++KNLD  ID + L   FS FG I S K+  +G G+SKGFGFV F + E A  A+ ++NG ++  K ++V    RK+ER+
Sbjct:  295 NLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEG-GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQ 375          
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP_YEAST (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Saccharomyces cerevisiae GN=PAB1 PE=1 SV=4)

HSP 1 Score: 173.326 bits (438), Expect = 5.114e-43
Identity = 85/161 (52.80%), Postives = 121/161 (75.16%), Query Frame = 1
Query:    1 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK--FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFD 477
            +GNIFIKNL   ID+KAL+DTFS FG+ILS KIATD +G+SKGFGFV FE + +A+ AID LNGML+N ++++V   L ++ER++   +TK  + N++VKN++  TTDE  +++F ++G I SA + +D DGK K FGFVN+E  +DA KAV+ALN  + +
Sbjct:  125 SGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELN 285          

HSP 2 Score: 120.939 bits (302), Expect = 3.012e-27
Identity = 66/164 (40.24%), Postives = 95/164 (57.93%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK----------TKFN--NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALN 462
            N+++KN++     +   + F+ FG I+S  +  D  G+ KGFGFV +E  E A  A++ LN   +N ++++VG   +K ER  V  K           K+   N+FVKNLD+S  DE L++ F  YGTITSA VMR  +GKSK FGFV F   ++A KA+   N
Sbjct:  220 NLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKN 383          

HSP 3 Score: 87.0409 bits (214), Expect = 4.820e-17
Identity = 50/163 (30.67%), Postives = 88/163 (53.99%), Query Frame = 1
Query:    1 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486
            + ++++ +L+ S+    L+D FS  G++ S ++  D  +  S G+ +V F + E+ + AI++LN   I  +   +       +R+    K    N+F+KNL     ++ L   F  +G I S+ +  D +GKSK FGFV+FE    A +A+DALNG   + +E
Sbjct:   37 SASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIEQLNYTPIKGRLCRI----MWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQE 195          

HSP 4 Score: 68.1662 bits (165), Expect = 2.317e-11
Identity = 33/83 (39.76%), Postives = 49/83 (59.04%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 255
            N+F+KNLD S+D + L + F+ +G I S K+    +G+SKGFGFV F   E A  AI + N  ++  K ++V    RK  R +
Sbjct:  323 NLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRS 405          
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: EPAB_XENTR (Embryonic polyadenylate-binding protein OS=Xenopus tropicalis GN=epabp PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 6.679e-43
Identity = 86/162 (53.09%), Postives = 117/162 (72.22%), Query Frame = 1
Query:    4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDR 483
            GN+FIKNLD+SID+KAL+DTFS+FGNILSCK+  D  G S+G+GFV FE +E+A  AI  +NGML+ND++VFVGHF  ++ERE    A   +F NV++KN  E   D+ L++IF  +G   S  VM D  G+S+ FGFVN+ N ++A KAV  +NGK+ + R
Sbjct:   99 GNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHG-SRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDTGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGR 259          

HSP 2 Score: 136.346 bits (342), Expect = 6.928e-32
Identity = 72/167 (43.11%), Postives = 105/167 (62.87%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGK 468
            N++IKN  + +D K L + FS+FGN LS K+  D +G+S+GFGFV + N E AQ A+ ++NG  +N + ++VG   ++ ER+   +K KF              N++VKNLD+   D+ L+K F  YGTITSA VM +G G SK FGFV F + ++A KAV  +NG+
Sbjct:  192 NVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDTGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQG-ELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGR 356          

HSP 3 Score: 82.8037 bits (203), Expect = 9.090e-16
Identity = 47/161 (29.19%), Postives = 88/161 (54.66%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486
            ++++ +L   +    L++ FS  G I+S ++  D  + +S G+ ++ F+    A+ A+D +N  +I  + + +       +R+    K+   NVF+KNLDES  ++ L   F  +G I S  V+ D  G S+ +GFV+FE  + A +A+  +NG   +DR+
Sbjct:   12 SLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDTMNFEVIKGRPIRI----MWSQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHG-SRGYGFVHFETQEAANRAIQTMNGMLLNDRK 167          

HSP 4 Score: 76.2554 bits (186), Expect = 8.508e-14
Identity = 36/84 (42.86%), Postives = 54/84 (64.29%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 258
            N+++KNLD  ID   L   FS +G I S K+ T+G G SKGFGFV F + E A  A+ ++NG +++ K ++V    RK+ER+ +
Sbjct:  295 NLYVKNLDDGIDDDRLRKEFSPYGTITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEERKAI 377          
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP_KLULA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Kluyveromyces lactis GN=PAB1 PE=3 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 8.723e-43
Identity = 82/160 (51.25%), Postives = 119/160 (74.38%), Query Frame = 1
Query:    1 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKF 474
            +GNIFIKNL  +ID+KALH+TFS+FG +LSCK+A D +G S+GFGFV F+ +  A++AI+ +NGML+N  +V+V   + K++R  +    K  F N++VKN+D  TTDE+ +++F +YG I SA + +D +GK K FGFVNF + + AAKAV+ LNGK+F
Sbjct:  137 SGNIFIKNLHPAIDNKALHETFSTFGEVLSCKVALDENGNSRGFGFVHFKEESDAKDAIEAVNGMLMNGLEVYVAMHVPKKDRISKLEEAKANFTNIYVKNIDVETTDEEFEQLFSQYGEIVSAALEKDAEGKPKGFGFVNFVDHNAAAKAVEELNGKEF 296          

HSP 2 Score: 120.939 bits (302), Expect = 3.012e-27
Identity = 67/164 (40.85%), Postives = 93/164 (56.71%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK----------TKFN--NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALN 462
            NI++KN+D     +     FS +G I+S  +  D  G+ KGFGFV F +  +A  A+++LNG     + ++VG   +K ER     K           KF   N+F+KNLD+S  DE LK+ F  YGTITSA VMRD +G SK FGFV F + ++A KA+   N
Sbjct:  232 NIYVKNIDVETTDEEFEQLFSQYGEIVSAALEKDAEGKPKGFGFVNFVDHNAAAKAVEELNGKEFKSQALYVGRAQKKYERAEELKKQYEQYRLEKLAKFQGVNLFIKNLDDSIDDEKLKEEFAPYGTITSARVMRDQEGNSKGFGFVCFSSPEEATKAMTEKN 395          

HSP 3 Score: 83.9593 bits (206), Expect = 4.080e-16
Identity = 48/154 (31.17%), Postives = 82/154 (53.25%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNG 465
            ++++  LD +I    L+D FS  G I S ++  D  +  S G+ +V + + E+ + AI +LN   IN +   +       ER+    K    N+F+KNL  +  ++ L + F  +G + S  V  D +G S+ FGFV+F+   DA  A++A+NG
Sbjct:   51 SLYVGELDPNITEALLYDVFSPLGPISSIRVCRDAVTKASLGYAYVNYTDYEAGKKAIQELNYAEINGRPCRI----MWSERDPAIRKKGSGNIFIKNLHPAIDNKALHETFSTFGEVLSCKVALDENGNSRGFGFVHFKEESDAKDAIEAVNG 200          

HSP 4 Score: 68.5514 bits (166), Expect = 1.774e-11
Identity = 34/83 (40.96%), Postives = 49/83 (59.04%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 255
            N+FIKNLD SID + L + F+ +G I S ++  D  G SKGFGFV F + E A  A+ + N  ++  K ++V    RK  R +
Sbjct:  335 NLFIKNLDDSIDDEKLKEEFAPYGTITSARVMRDQEGNSKGFGFVCFSSPEEATKAMTEKNQQIVAGKPLYVAIAQRKDVRRS 417          
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: EPABA_XENLA (Embryonic polyadenylate-binding protein A OS=Xenopus laevis GN=epabp-A PE=1 SV=2)

HSP 1 Score: 172.555 bits (436), Expect = 8.723e-43
Identity = 86/162 (53.09%), Postives = 116/162 (71.60%), Query Frame = 1
Query:    4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDR 483
            GN+FIKNLD+SID+KAL+DTFS+FGNILSCK+  D  G S+G+GFV FE  E+A  AI  +NGML+ND++VFVGHF  ++ERE    A   +F NV++KN  E   D+ L++IF  +G   S  VM D  G+S+ FGFVN+ N ++A KAV  +NGK+ + R
Sbjct:   99 GNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHG-SRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGR 259          

HSP 2 Score: 137.117 bits (344), Expect = 4.062e-32
Identity = 73/167 (43.71%), Postives = 106/167 (63.47%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGK 468
            N++IKN  + +D K L + FS+FGN LS K+  D SG+S+GFGFV + N E AQ A+ ++NG  +N + ++VG   ++ ER++  +K KF              N++VKNLD+   D+ L+K F  YGTITSA VM +G G SK FGFV F + ++A KAV  +NG+
Sbjct:  192 NVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQS-ELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFLPYGTITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGR 356          

HSP 3 Score: 80.4925 bits (197), Expect = 4.512e-15
Identity = 47/161 (29.19%), Postives = 87/161 (54.04%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486
            +++I +L   +    L++ FS  G I+S ++  D  + +S  + ++ F+    A+ A+D +N  +I  + + +       +R+    K+   NVF+KNLDES  ++ L   F  +G I S  V+ D  G S+ +GFV+FE  + A +A+  +NG   +DR+
Sbjct:   12 SLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERALDTMNFEVIKGRPIRI----MWSQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVVCDEHG-SRGYGFVHFETHEAANRAIQTMNGMLLNDRK 167          

HSP 4 Score: 73.9442 bits (180), Expect = 4.223e-13
Identity = 35/84 (41.67%), Postives = 53/84 (63.10%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 258
            N+++KNLD  ID   L   F  +G I S K+ T+G G SKGFGFV F + E A  A+ ++NG +++ K ++V    RK+ER+ +
Sbjct:  295 NLYVKNLDDGIDDDRLRKEFLPYGTITSAKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEERKAI 377          
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP_CANGA (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Candida glabrata GN=PAB1 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.943e-42
Identity = 84/159 (52.83%), Postives = 116/159 (72.96%), Query Frame = 1
Query:    4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKF 474
            GNIFIKNL   ID+KAL+DTFS FGNILS K+ATD +G+SKGFG+V FE  ESA  AID LNGML+N ++++VG  L K+ERE+    +K  F NV++KN++  TTD++ +++  ++G   S V+ R  +G++K FGFVNF N +DA K V+ LN  +F
Sbjct:  123 GNIFIKNLHPDIDNKALYDTFSVFGNILSSKVATDETGKSKGFGYVHFEEDESASEAIDALNGMLLNGQEIYVGPHLSKKERESKFEEMKANFTNVYIKNINTETTDKEFEELVAKFGKTDSVVLERTPEGENKGFGFVNFVNHEDAVKCVEELNNTEF 281          

HSP 2 Score: 102.834 bits (255), Expect = 8.489e-22
Identity = 59/164 (35.98%), Postives = 87/164 (53.05%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIK----------TKFN--NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALN 462
            N++IKN++     K   +  + FG   S  +     G++KGFGFV F N E A   +++LN      + ++V    +K ER+    K           K+   N+F+KNLD+S  D+ L++ F  YGTITSA VM   +GKSK FGFV F   ++A KA+   N
Sbjct:  217 NVYIKNINTETTDKEFEELVAKFGKTDSVVLERTPEGENKGFGFVNFVNHEDAVKCVEELNNTEFKGQPLYVNRAQKKYERQQELKKQYEATRMEKMAKYQGINLFIKNLDDSIDDKKLEEEFAPYGTITSAKVMTTENGKSKGFGFVCFSTPEEATKAITEKN 380          

HSP 3 Score: 91.6633 bits (226), Expect = 1.957e-18
Identity = 53/163 (32.52%), Postives = 89/163 (54.60%), Query Frame = 1
Query:    1 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486
            + ++++ +LD S+    L+D FS  G + S ++  D  +  S G+ +V F + ++A+ AI+KLN   I  K   +       +R+    K    N+F+KNL     ++ L   F  +G I S+ V  D  GKSK FG+V+FE  + A++A+DALNG   + +E
Sbjct:   34 SASLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYAYVNFNDHDAAKTAIEKLNFTPIKGKLCRI----MWSQRDPSLRKKGAGNIFIKNLHPDIDNKALYDTFSVFGNILSSKVATDETGKSKGFGYVHFEEDESASEAIDALNGMLLNGQE 192          

HSP 4 Score: 72.7886 bits (177), Expect = 9.407e-13
Identity = 37/83 (44.58%), Postives = 50/83 (60.24%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 255
            N+FIKNLD SID K L + F+ +G I S K+ T  +G+SKGFGFV F   E A  AI + N  ++  K ++V    RK  R +
Sbjct:  320 NLFIKNLDDSIDDKKLEEEFAPYGTITSAKVMTTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRS 402          
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: EPABB_XENLA (Embryonic polyadenylate-binding protein B OS=Xenopus laevis GN=epabp-B PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.943e-42
Identity = 86/162 (53.09%), Postives = 116/162 (71.60%), Query Frame = 1
Query:    4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDR 483
            GN+FIKNLD SID+KAL+DTFS+FG+ILSCK+  D  G S+G+GFV FE +E+A  AI  +NGML+ND++VFVGHF  ++ERE    A   +F NV++KN  E   D+ LK+IF  +G   S  VM D  G+S+ FGFVN+ N ++A KAV  +NGK+ + R
Sbjct:   99 GNVFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYG-SRGYGFVHFETQEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDNSGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGR 259          

HSP 2 Score: 135.961 bits (341), Expect = 9.048e-32
Identity = 73/167 (43.71%), Postives = 104/167 (62.28%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGK 468
            N++IKN  + +D K L + FS+FGN LS K+  D SG+S+GFGFV + N E AQ A+ ++NG  +N + V+VG   ++ ER+   +K KF              N++VKNLD+   D+ L+K F  YGTITS  VM +G G SK FGFV F + ++A KAV  +NG+
Sbjct:  192 NVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDNSGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYVGRAQKRIERQG-ELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSTKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGR 356          

HSP 3 Score: 80.8777 bits (198), Expect = 3.454e-15
Identity = 47/161 (29.19%), Postives = 88/161 (54.66%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486
            +++I +L   +    L++ FS  G I+S ++  D  + +S G+ ++ F+    A+ A+D +N  +I  + + +       +R+    K+   NVF+KNLD+S  ++ L   F  +G I S  V+ D  G S+ +GFV+FE  + A +A+  +NG   +DR+
Sbjct:   12 SLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERALDTMNFEVIKGRPIRI----MWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFGDILSCKVVCDEYG-SRGYGFVHFETQEAANRAIQTMNGMLLNDRK 167          

HSP 4 Score: 75.8702 bits (185), Expect = 1.111e-13
Identity = 36/84 (42.86%), Postives = 54/84 (64.29%), Query Frame = 1
Query:    7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV 258
            N+++KNLD  ID   L   FS +G I S K+ T+G G SKGFGFV F + E A  A+ ++NG +++ K ++V    RK+ER+ +
Sbjct:  295 NLYVKNLDDGIDDDRLRKEFSPYGTITSTKVMTEG-GHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEERKAI 377          
The following BLAST results are available for this feature:
BLAST of FE659327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 150
Match NameE-valueIdentityDescription
PABP_MAGGR1.217e-4452.50Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PAP1A_DICDI6.041e-4456.05Polyadenylate-binding protein 1-A OS=Dictyostelium... [more]
PABP_LODEL7.890e-4452.15Polyadenylate-binding protein, cytoplasmic and nuc... [more]
PABP3_HUMAN1.030e-4354.60Polyadenylate-binding protein 3 OS=Homo sapiens GN... [more]
PABP_YEAST5.114e-4352.80Polyadenylate-binding protein, cytoplasmic and nuc... [more]
EPAB_XENTR6.679e-4353.09Embryonic polyadenylate-binding protein OS=Xenopus... [more]
PABP_KLULA8.723e-4351.25Polyadenylate-binding protein, cytoplasmic and nuc... [more]
EPABA_XENLA8.723e-4353.09Embryonic polyadenylate-binding protein A OS=Xenop... [more]
PABP_CANGA1.943e-4252.83Polyadenylate-binding protein, cytoplasmic and nuc... [more]
EPABB_XENLA1.943e-4253.09Embryonic polyadenylate-binding protein B OS=Xenop... [more]

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Properties
Property NameValue
Genbank descriptionA141 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659327 ID=FE659327; Name=FE659327; organism=Citrus sinensis; type=EST; length=489bp
ACTGGGAACATATTTATCAAGAATTTGGACAAGTCTATTGATCACAAAGC
ATTACACGATACATTTTCTTCATTCGGAAACATTCTTTCTTGTAAGATAG
CTACTGATGGTTCTGGCCAGTCCAAAGGTTTCGGTTTTGTGCAATTTGAG
AACAAAGAATCTGCTCAAAATGCTATTGATAAGTTAAATGGCATGCTTAT
TAATGATAAACAAGTGTTCGTTGGGCACTTTCTTCGTAAGCAGGAAAGAG
AAACTGTAGCAATTAAAACAAAATTCAATAACGTATTTGTCAAAAACCTT
GATGAGTCAACTACAGATGAAGATTTGAAGAAAATTTTTGGTGAGTATGG
AACAATTACCAGTGCAGTAGTGATGAGGGATGGAGATGGAAAATCCAAGT
GTTTTGGATTTGTGAATTTTGAAAATGTAGATGATGCTGCCAAAGCTGTT
GATGCTCTTAATGGAAAGAAATTTGATGACAGAGAATGG
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