FE659327
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP_PICGU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Pichia guilliermondii GN=PAB1 PE=3 SV=2) HSP 1 Score: 169.859 bits (429), Expect = 5.654e-42 Identity = 85/163 (52.15%), Postives = 116/163 (71.17%), Query Frame = 1 Query: 4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET--VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486 GNIFIKNL +ID+KALHDTFS+FG ILSCK+ATD GQSK FGFV +E E+A+ AI+ +NGML+ND++VFVG + K++RE+ +K F NV+VKNL + ++IF +G +TS + D +GKS+ FGFVNFEN + A AV +N K+ D ++ Sbjct: 146 GNIFIKNLHPAIDNKALHDTFSAFGRILSCKVATDELGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHVSKRDRESKFEEMKANFTNVYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETDQEGKSRGFGFVNFENHESALNAVKEMNDKEIDGQK 308 HSP 2 Score: 124.405 bits (311), Expect = 2.724e-28 Identity = 68/164 (41.46%), Postives = 103/164 (62.80%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--------ETVAIK--TKFN--NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALN 462 N+++KNL +D+ + F FG + S + TD G+S+GFGFV FEN ESA NA+ ++N I+ ++++VG +K+ER E+ ++ +K+ N+FVKNLD+S E L++ F +GTITSA VM D GKSK FGFV F + ++A KA+ +N Sbjct: 240 NVYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETDQEGKSRGFGFVNFENHESALNAVKEMNDKEIDGQKLYVGRAQKKRERLDELKRLYESTRLEKLSKYQGVNLFVKNLDDSIDSEKLEEEFKPFGTITSARVMVDDAGKSKGFGFVCFSSPEEATKAITEMN 403 HSP 3 Score: 74.3294 bits (181), Expect = 3.233e-13 Identity = 36/83 (43.37%), Postives = 51/83 (61.45%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERET 255 N+F+KNLD SID + L + F FG I S ++ D +G+SKGFGFV F + E A AI ++N +I K ++V RK R + Sbjct: 343 NLFVKNLDDSIDSEKLEEEFKPFGTITSARVMVDDAGKSKGFGFVCFSSPEEATKAITEMNQRMIQGKPLYVALAQRKDVRRS 425
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP_CRYNE (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Cryptococcus neoformans GN=PAB1 PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 5.654e-42 Identity = 82/163 (50.31%), Postives = 117/163 (71.78%), Query Frame = 1 Query: 4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486 GNIFIKNLD+SID+KALHDTF++FG+ILSCK+ TD +G+S+GF FV + E+A AI +NGML+NDK+V+VGH + K+ER + ++ +F NV++KN+D TD + + + +G S + RD G SK FGFVN+EN + A KAVD LN K+ + ++ Sbjct: 134 GNIFIKNLDQSIDNKALHDTFAAFGDILSCKVGTDENGKSRGFAFVHYSTGEAADAAIKAVNGMLLNDKKVYVGHHVGKKERLSKVEELRAQFTNVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRDEKGVSKGFGFVNYENHESARKAVDELNEKEVNGKK 296 HSP 2 Score: 124.79 bits (312), Expect = 2.086e-28 Identity = 67/166 (40.36%), Postives = 95/166 (57.23%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGK 468 N++IKN+D + D FG +S ++ D G SKGFGFV +EN ESA+ A+D+LN +N K+++ G K ERE K+ N++VKNLD+ D+ L+ F +GTITS+ VMRD G S+ FGFV + + D+A KAV +NGK Sbjct: 228 NVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRDEKGVSKGFGFVNYENHESARKAVDELNEKEVNGKKLYAGRAQTKSEREAELKKSHEEKRLENEAKSAGVNLYVKNLDDEWDDDRLRAEFEAFGTITSSKVMRDDSGVSRGFGFVCYSSPDEATKAVSEMNGK 393 HSP 3 Score: 82.0333 bits (201), Expect = 1.551e-15 Identity = 46/163 (28.22%), Postives = 85/163 (52.15%), Query Frame = 1 Query: 1 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486 + ++++ LD S+ L + F+ G + S ++ D + +S G+ +V + N + A++ LN LI + + +R+ KT N+F+KNLD+S ++ L F +G I S V D +GKS+ F FV++ + A A+ A+NG +D++ Sbjct: 45 SASLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEHLNYSLIKGQSCRI----MWSQRDPALRKTGQGNIFIKNLDQSIDNKALHDTFAAFGDILSCKVGTDENGKSRGFAFVHYSTGEAADAAIKAVNGMLLNDKK 203 HSP 4 Score: 67.0106 bits (162), Expect = 5.162e-11 Identity = 32/81 (39.51%), Postives = 47/81 (58.02%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER 249 N+++KNLD D L F +FG I S K+ D SG S+GFGFV + + + A A+ ++NG +I K ++V RK R Sbjct: 331 NLYVKNLDDEWDDDRLRAEFEAFGTITSSKVMRDDSGVSRGFGFVCYSSPDEATKAVSEMNGKMIGTKPLYVALAQRKDVR 411
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP_YARLI (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Yarrowia lipolytica GN=PAB1 PE=3 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 1.702e-38 Identity = 79/159 (49.69%), Postives = 111/159 (69.81%), Query Frame = 1 Query: 4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--ETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKF 474 GNI+IKNLD +ID+KALHDTFS+FG ILSCKIATD G S+GFGFV +E+ ESA++AI +NGML+NDK+VFVG + K +R K F NVF+KNL T+ + +++ ++G +S + + +GK FGFV+++ D A KA+D L+ +F Sbjct: 134 GNIYIKNLDPAIDNKALHDTFSAFGQILSCKIATDEFGNSRGFGFVHYESAESAESAIQHVNGMLLNDKKVFVGPHVPKSDRMQSFEEQKNSFTNVFIKNLGTEITEAEFEELVNKFGETSSVHLSTNDEGKPTGFGFVDYKEHDVAVKAIDGLSETEF 292 HSP 2 Score: 100.908 bits (250), Expect = 3.226e-21 Identity = 60/164 (36.59%), Postives = 87/164 (53.05%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKT-------KFN-----NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALN 462 N+FIKNL I + + FG S ++T+ G+ GFGFV ++ + A AID L+ ++F G +K ER K K N N+++KNLD++ D+ L+ F +GTITSA VM D GKSK FGFV + + ++A KAV +N Sbjct: 228 NVFIKNLGTEITEAEFEELVNKFGETSSVHLSTNDEGKPTGFGFVDYKEHDVAVKAIDGLSETEFKGNKLFAGRAKKKYERADELRKQYEASRLEKLNKYQGVNLYIKNLDDTIDDDKLRAEFAPHGTITSAKVMVDEAGKSKGFGFVCYSSPEEATKAVTEMN 391 HSP 3 Score: 81.2629 bits (199), Expect = 2.645e-15 Identity = 43/161 (26.71%), Postives = 84/161 (52.17%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486 ++++ LD S+ L + F+ G + S ++ D + +S G+ +V F N+ A+++LN I ++ + +R+ KT N+++KNLD + ++ L F +G I S + D G S+ FGFV++E+ + A A+ +NG +D++ Sbjct: 47 SLYVGELDPSVTEAMLFEIFNPIGPVTSVRVCRDAITRRSLGYAYVNFHNQADGIRALEELNYSPIKERPCRI----MWSQRDPALRKTGAGNIYIKNLDPAIDNKALHDTFSAFGQILSCKIATDEFGNSRGFGFVHYESAESAESAIQHVNGMLLNDKK 203
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP5_PONPY (Polyadenylate-binding protein 5 OS=Pongo pygmaeus GN=PABPC5 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.220e-36 Identity = 82/164 (50.00%), Postives = 111/164 (67.68%), Query Frame = 1 Query: 4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDR 483 GNIFIKNLDKSID++AL FS+FGNILSCK+ D +G SKG+ +V F++ +A AI +NG+ +N++QV+VG F +ER ++T+ F NVFVKN+ + DE LK++F EYG S V+RD GKSK FGFV +E + A KAV L+GK D + Sbjct: 106 GNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER-AAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGK 267 HSP 2 Score: 117.087 bits (292), Expect = 4.350e-26 Identity = 66/166 (39.76%), Postives = 100/166 (60.24%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--------ETVAIKTKFN----NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGK 468 N+F+KN+ ID + L + F +G S K+ D SG+SKGFGFV++E E+AQ A+ L+G I+ K ++VG +K ER E + +K K +++KNLDE+ DE LK+ F +G+I+ A VM + G+ K FG V F + ++A KAVD +NG+ Sbjct: 200 NVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMNGR 364 HSP 3 Score: 67.0106 bits (162), Expect = 5.162e-11 Identity = 45/160 (28.12%), Postives = 84/160 (52.50%), Query Frame = 1 Query: 10 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486 +++ +LD + L+ F G + +I D +S G+G+V F A+ A++ +N LIN K L + + K+ N+F+KNLD+S + L +F +G I S V+ D +G SK + +V+F+++ A +A+ +NG + ++R+ Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFR----LMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQ 174
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP5_PANTR (Polyadenylate-binding protein 5 OS=Pan troglodytes GN=PABPC5 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.220e-36 Identity = 82/164 (50.00%), Postives = 111/164 (67.68%), Query Frame = 1 Query: 4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDR 483 GNIFIKNLDKSID++AL FS+FGNILSCK+ D +G SKG+ +V F++ +A AI +NG+ +N++QV+VG F +ER ++T+ F NVFVKN+ + DE LK++F EYG S V+RD GKSK FGFV +E + A KAV L+GK D + Sbjct: 106 GNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER-AAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGK 267 HSP 2 Score: 117.087 bits (292), Expect = 4.350e-26 Identity = 66/166 (39.76%), Postives = 100/166 (60.24%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--------ETVAIKTKFN----NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGK 468 N+F+KN+ ID + L + F +G S K+ D SG+SKGFGFV++E E+AQ A+ L+G I+ K ++VG +K ER E + +K K +++KNLDE+ DE LK+ F +G+I+ A VM + G+ K FG V F + ++A KAVD +NG+ Sbjct: 200 NVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMNGR 364 HSP 3 Score: 67.0106 bits (162), Expect = 5.162e-11 Identity = 45/160 (28.12%), Postives = 84/160 (52.50%), Query Frame = 1 Query: 10 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486 +++ +LD + L+ F G + +I D +S G+G+V F A+ A++ +N LIN K L + + K+ N+F+KNLD+S + L +F +G I S V+ D +G SK + +V+F+++ A +A+ +NG + ++R+ Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFR----LMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQ 174
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP5_MACMU (Polyadenylate-binding protein 5 OS=Macaca mulatta GN=PABPC5 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.220e-36 Identity = 82/164 (50.00%), Postives = 111/164 (67.68%), Query Frame = 1 Query: 4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDR 483 GNIFIKNLDKSID++AL FS+FGNILSCK+ D +G SKG+ +V F++ +A AI +NG+ +N++QV+VG F +ER ++T+ F NVFVKN+ + DE LK++F EYG S V+RD GKSK FGFV +E + A KAV L+GK D + Sbjct: 106 GNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER-AAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGK 267 HSP 2 Score: 117.087 bits (292), Expect = 4.350e-26 Identity = 66/166 (39.76%), Postives = 100/166 (60.24%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--------ETVAIKTKFN----NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGK 468 N+F+KN+ ID + L + F +G S K+ D SG+SKGFGFV++E E+AQ A+ L+G I+ K ++VG +K ER E + +K K +++KNLDE+ DE LK+ F +G+I+ A VM + G+ K FG V F + ++A KAVD +NG+ Sbjct: 200 NVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMNGR 364 HSP 3 Score: 67.0106 bits (162), Expect = 5.162e-11 Identity = 45/160 (28.12%), Postives = 84/160 (52.50%), Query Frame = 1 Query: 10 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486 +++ +LD + L+ F G + +I D +S G+G+V F A+ A++ +N LIN K L + + K+ N+F+KNLD+S + L +F +G I S V+ D +G SK + +V+F+++ A +A+ +NG + ++R+ Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFR----LMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQ 174
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP5_HYLLA (Polyadenylate-binding protein 5 OS=Hylobates lar GN=PABPC5 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.220e-36 Identity = 82/164 (50.00%), Postives = 111/164 (67.68%), Query Frame = 1 Query: 4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDR 483 GNIFIKNLDKSID++AL FS+FGNILSCK+ D +G SKG+ +V F++ +A AI +NG+ +N++QV+VG F +ER ++T+ F NVFVKN+ + DE LK++F EYG S V+RD GKSK FGFV +E + A KAV L+GK D + Sbjct: 106 GNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER-AAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGK 267 HSP 2 Score: 117.087 bits (292), Expect = 4.350e-26 Identity = 66/166 (39.76%), Postives = 100/166 (60.24%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--------ETVAIKTKFN----NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGK 468 N+F+KN+ ID + L + F +G S K+ D SG+SKGFGFV++E E+AQ A+ L+G I+ K ++VG +K ER E + +K K +++KNLDE+ DE LK+ F +G+I+ A VM + G+ K FG V F + ++A KAVD +NG+ Sbjct: 200 NVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMNGR 364 HSP 3 Score: 67.0106 bits (162), Expect = 5.162e-11 Identity = 45/160 (28.12%), Postives = 84/160 (52.50%), Query Frame = 1 Query: 10 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486 +++ +LD + L+ F G + +I D +S G+G+V F A+ A++ +N LIN K L + + K+ N+F+KNLD+S + L +F +G I S V+ D +G SK + +V+F+++ A +A+ +NG + ++R+ Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFR----LMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQ 174
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP5_HUMAN (Polyadenylate-binding protein 5 OS=Homo sapiens GN=PABPC5 PE=1 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.220e-36 Identity = 82/164 (50.00%), Postives = 111/164 (67.68%), Query Frame = 1 Query: 4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDR 483 GNIFIKNLDKSID++AL FS+FGNILSCK+ D +G SKG+ +V F++ +A AI +NG+ +N++QV+VG F +ER ++T+ F NVFVKN+ + DE LK++F EYG S V+RD GKSK FGFV +E + A KAV L+GK D + Sbjct: 106 GNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER-AAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGK 267 HSP 2 Score: 117.087 bits (292), Expect = 4.350e-26 Identity = 66/166 (39.76%), Postives = 100/166 (60.24%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--------ETVAIKTKFN----NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGK 468 N+F+KN+ ID + L + F +G S K+ D SG+SKGFGFV++E E+AQ A+ L+G I+ K ++VG +K ER E + +K K +++KNLDE+ DE LK+ F +G+I+ A VM + G+ K FG V F + ++A KAVD +NG+ Sbjct: 200 NVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMNGR 364 HSP 3 Score: 67.0106 bits (162), Expect = 5.162e-11 Identity = 45/160 (28.12%), Postives = 84/160 (52.50%), Query Frame = 1 Query: 10 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486 +++ +LD + L+ F G + +I D +S G+G+V F A+ A++ +N LIN K L + + K+ N+F+KNLD+S + L +F +G I S V+ D +G SK + +V+F+++ A +A+ +NG + ++R+ Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFR----LMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQ 174
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP5_GORGO (Polyadenylate-binding protein 5 OS=Gorilla gorilla gorilla GN=PABPC5 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.220e-36 Identity = 82/164 (50.00%), Postives = 111/164 (67.68%), Query Frame = 1 Query: 4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTK----FNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDR 483 GNIFIKNLDKSID++AL FS+FGNILSCK+ D +G SKG+ +V F++ +A AI +NG+ +N++QV+VG F +ER ++T+ F NVFVKN+ + DE LK++F EYG S V+RD GKSK FGFV +E + A KAV L+GK D + Sbjct: 106 GNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER-AAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGK 267 HSP 2 Score: 117.087 bits (292), Expect = 4.350e-26 Identity = 66/166 (39.76%), Postives = 100/166 (60.24%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQER--------ETVAIKTKFN----NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGK 468 N+F+KN+ ID + L + F +G S K+ D SG+SKGFGFV++E E+AQ A+ L+G I+ K ++VG +K ER E + +K K +++KNLDE+ DE LK+ F +G+I+ A VM + G+ K FG V F + ++A KAVD +NG+ Sbjct: 200 NVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLKEEFSSFGSISRAKVMME-VGQGKGFGVVCFSSFEEATKAVDEMNGR 364 HSP 3 Score: 67.0106 bits (162), Expect = 5.162e-11 Identity = 45/160 (28.12%), Postives = 84/160 (52.50%), Query Frame = 1 Query: 10 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSK-GFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486 +++ +LD + L+ F G + +I D +S G+G+V F A+ A++ +N LIN K L + + K+ N+F+KNLD+S + L +F +G I S V+ D +G SK + +V+F+++ A +A+ +NG + ++R+ Sbjct: 20 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFR----LMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQ 174
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PAB4L_HUMAN (Polyadenylate-binding protein 4-like OS=Homo sapiens GN=PABPC4L PE=2 SV=1) HSP 1 Score: 149.443 bits (376), Expect = 7.908e-36 Identity = 75/157 (47.77%), Postives = 108/157 (68.79%), Query Frame = 1 Query: 4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGK 468 GN+FIKNLDKSID+K L++ FS+FG ILS K+ +D G SKG+ FV F+N+ +A AI+++NG L+ +VFVG F +++RE + ++F NV++KN DE LK +F +YG S VM D GKSK FGFV+F++ + A KAV+ +NG+ Sbjct: 98 GNVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKAVEEMNGR 253 HSP 2 Score: 124.02 bits (310), Expect = 3.558e-28 Identity = 64/167 (38.32%), Postives = 103/167 (61.68%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFN-------------NVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGK 468 N++IKN +D + L D FS +G LS K+ TD SG+SKGFGFV F++ E+A+ A++++NG IN + +FVG +K ER+ +K F +++KNLD++ DE L+ F +G+I+ VM++ +G+SK FG + F + +DA KA+ +NG+ Sbjct: 191 NVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQ-AELKQMFEQLKRERIRGCQGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQE-EGQSKGFGLICFSSPEDATKAMTEMNGR 355 HSP 3 Score: 82.4185 bits (202), Expect = 1.187e-15 Identity = 50/155 (32.26%), Postives = 85/155 (54.84%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGK 468 ++++ +L + L FS+ G +LS +I D + +S G+ +V F AQ A+D +N +I K + L +R+ ++ NVF+KNLD+S ++ L + F +G I S+ VM D G SK + FV+F+N A +A++ +NGK Sbjct: 11 SLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTMNFDIIKGKSIR----LMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFGKILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGK 160 The following BLAST results are available for this feature:
BLAST of FE659327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 150
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Sequences
The
following sequences are available for this feature:
EST sequence >FE659327 ID=FE659327; Name=FE659327; organism=Citrus sinensis; type=EST; length=489bpback to top |