FE659327
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABPX_ARATH (Probable polyadenylate-binding protein At2g36660 OS=Arabidopsis thaliana GN=At2g36660 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 5.126e-35 Identity = 66/160 (41.25%), Postives = 109/160 (68.12%), Query Frame = 1 Query: 4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDR 483 GN+F+KNL +S+ + L D F FGNI+SCK+AT G+S+G+GFVQFE +++A AI LN ++ DK+++VG F++K +R V + K+ N+++KNLD +++ L++ F E+G I S + +D + + + FVNF+N +DA +A + +NG KF + Sbjct: 112 GNVFVKNLPESVTNAVLQDMFKKFGNIVSCKVATLEDGKSRGYGFVQFEQEDAAHAAIQTLNSTIVADKEIYVGKFMKKTDR--VKPEEKYTNLYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDENRLCRGYAFVNFDNPEDARRAAETVNGTKFGSK 269 HSP 2 Score: 116.701 bits (291), Expect = 5.681e-26 Identity = 62/168 (36.90%), Postives = 96/168 (57.14%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV------------AIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKF 474 N+++KNLD + L + F+ FG I+S IA D + +G+ FV F+N E A+ A + +NG K ++VG +K ERE + + K +N++VKN++ + T+E+L+K F + GTITS +M D GKSK FGFV F ++A AV +G+ F Sbjct: 202 NLYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDENRLCRGYAFVNFDNPEDARRAAETVNGTKFGSKCLYVGRAQKKAEREQLLREQFKEKHEEQKMIAKVSNIYVKNVNVAVTEEELRKHFSQCGTITSTKLMCDEKGKSKGFGFVCFSTPEEAIDAVKTFHGQMF 369 HSP 3 Score: 96.2857 bits (238), Expect = 7.945e-20 Identity = 57/163 (34.97%), Postives = 90/163 (55.21%), Query Frame = 1 Query: 1 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGS-GQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486 T ++++ +L S+ L+D F+ F ++ S ++ D S G+S +G+ F +++ A AI+K N L+N K + V +R + A + NVFVKNL ES T+ L+ +F ++G I S V DGKS+ +GFV FE D A A+ LN D+E Sbjct: 23 TASLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAIEKKNNSLLNGKMIRVMWSVRAPD----ARRNGVGNVFVKNLPESVTNAVLQDMFKKFGNIVSCKVATLEDGKSRGYGFVQFEQEDAAHAAIQTLNSTIVADKE 181
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PAP1B_DICDI (Polyadenylate-binding protein 1-B OS=Dictyostelium discoideum GN=pabpc1B PE=3 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.706e-30 Identity = 72/148 (48.65%), Postives = 97/148 (65.54%), Query Frame = 1 Query: 4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDL-KKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAK 444 GNIF+KNL+K +D+ L+DTFSSFGNILSCK+ + G SKG+G+V FE +SA+ AI+K+NG LI K + V F+ K ER V N VF +N DES T E L +++ +G I S ++ D +GKSK G V F+N +DA K Sbjct: 274 GNIFVKNLEKGVDNAMLYDTFSSFGNILSCKVEFE-KGISKGYGYVHFETNDSAEKAIEKVNGTLILGKPINVERFVSKVERYKVE-----NKVFFRNADESITIEILQQELSNRFGEIESCILKNDANGKSKGLGLVEFKNQEDAQK 415 HSP 2 Score: 99.3673 bits (246), Expect = 9.385e-21 Identity = 57/179 (31.84%), Postives = 97/179 (54.19%), Query Frame = 1 Query: 10 IFIKNLDKSIDHKALHDTFSS-FGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI------------------NDKQVFVGHFLRKQERET-VAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKKFDDRE 486 +F +N D+SI + L S+ FG I SC + D +G+SKG G V+F+N+E AQ + + ++I N K + + K ER T KT ++F+ N+DES + +K+ F ++GTI +++D + ++K FGF++F + +A KA+D+LNG F ++ Sbjct: 361 VFFRNADESITIEILQQELSNRFGEIESCILKNDANGKSKGLGLVEFKNQEDAQKILTESGALIISTIDGTTTVSSNGGTIEINGKPITIDRIKSKVERFTEYRKKTTDLSLFINNIDESIDRDLIKEEFAKHGTIIGIKIVQDENARNKGFGFISFSEIQEAQKALDSLNGFTFGSKQ 539 HSP 3 Score: 73.1738 bits (178), Expect = 7.203e-13 Identity = 48/156 (30.77%), Postives = 80/156 (51.28%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGN--ILSCKIATDGSG-QSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNG 465 ++++ +L ++ L++ FS G I S + D + +S G+ +V F N A+ A+D LN L++ K + R + KT N+FVKNL++ + L F +G I S V + G SK +G+V+FE D A KA++ +NG Sbjct: 185 SLYVGDLAADVNEIILNELFSKVGRNAIASIHVCRDSNTLRSLGYAYVNFFNNHDAERALDTLNYTLVHGKPCRIMWSYRDPTKR----KTNVGNIFVKNLEKGVDNAMLYDTFSSFGNILSCKVEFE-KGISKGYGYVHFETNDSAEKAIEKVNG 335 HSP 4 Score: 66.6254 bits (161), Expect = 6.742e-11 Identity = 29/72 (40.28%), Postives = 44/72 (61.11%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFV 222 ++FI N+D+SID + + F+ G I+ KI D + ++KGFGF+ F + AQ A+D LNG KQ+ V Sbjct: 471 SLFINNIDESIDRDLIKEEFAKHGTIIGIKIVQDENARNKGFGFISFSEIQEAQKALDSLNGFTFGSKQIQV 542
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PABP_ENCCU (Polyadenylate-binding protein, cytoplasmic and nuclear OS=Encephalitozoon cuniculi GN=PAB1 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 3.682e-25 Identity = 61/159 (38.36%), Postives = 92/159 (57.86%), Query Frame = 1 Query: 1 TGNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAI---DKLNGMLINDKQVFVGHFLRK-QERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNG 465 TGNIF+KNL + K L D FS FG I+SCK+AT G+SKG+GFVQF+ K++A+ I L+G+L+ ++ V + + ++ E+ F N F+KN ++ +L ++ YG +TS +GK K F F NFEN + A A+ L+G Sbjct: 95 TGNIFVKNLPEDFTGKDLDDAFSMFGEIVSCKVATTSHGKSKGYGFVQFKEKKAAKKVIKNFSSLDGLLLGGNRIVVELYNPEIKKGESKKTSATFTNCFIKNFPFDASEAELLELLERYGKVTSLFFPVKDNGKPKGFAFANFENHESALNAIKNLHG 253 HSP 2 Score: 74.3294 bits (181), Expect = 3.233e-13 Identity = 50/147 (34.01%), Postives = 72/147 (48.98%), Query Frame = 1 Query: 10 IFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAV 450 I++ L L FS+ G +LS K+ S F FV FEN+E A+ AI + ++++Q+ V ++K ER + N+FVKNL E T +DL F +G I S V GKSK +GFV F+ A K + Sbjct: 16 IYVGELSPKTLDSDLFRVFSNVGKVLSVKLIKRAEPVSS-FAFVTFENEEDAERAIREYKHYELHNRQIRV---MKKDER-----PPETGNIFVKNLPEDFTGKDLDDAFSMFGEIVSCKVATTSHGKSKGYGFVQFKEKKAAKKVI 153 HSP 3 Score: 70.0922 bits (170), Expect = 6.097e-12 Identity = 49/169 (28.99%), Postives = 78/169 (46.15%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLI-------NDKQVFVGHFLRKQER--------ETVAIKTKF--NNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALN 462 N FIKN L + +G + S +G+ KGF F FEN ESA NAI L+G + ++ RK+ER E ++++ + N+++ N+ E E+L IF E+G ITS V DG K + ++ + ++A+ AV+ N Sbjct: 192 NCFIKNFPFDASEAELLELLERYGKVTSLFFPVKDNGKPKGFAFANFENHESALNAIKNLHGTFPFGAGRDGTGEAFYIQKGQRKEERAEELRKMFEQMSMQGQSYKKNLYITNIPEGFGCEELGSIFKEFGNITSISVGVDGANSQKQYAYICYSTPEEASIAVERGN 360
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: PAP1M_HUMAN (Polyadenylate-binding protein 1-like 2 OS=Homo sapiens GN=PABPC1L2A PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 2.639e-23 Identity = 55/108 (50.93%), Postives = 77/108 (71.30%), Query Frame = 1 Query: 4 GNIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDGSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETV--AIKTKFNNVFVKNLDESTTDE 321 GN+FIKNL K+ID+KAL++ FS+FGNILSCK+A D G KG+GFV F+ +ESA+ AID +NGM +N +++FVG F +ERE A + + VK+ +E T +E Sbjct: 90 GNVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAERGAWARQSTSADVKDFEEDTDEE 196 HSP 2 Score: 75.0998 bits (183), Expect = 1.895e-13 Identity = 46/154 (29.87%), Postives = 83/154 (53.90%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNG 465 ++++ +L + L++ FS G ILS +I D + +S G+ +V ++ A+ A++ LN +I + V + +R+ K+ NVF+KNL ++ ++ L IF +G I S V D G K +GFV+F+ + A +A+D +NG Sbjct: 3 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALETLNFDVIKGRPVRI----MWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDVMNG 151
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: SXL_CHRRU (Sex-lethal homolog OS=Chrysomya rufifacies GN=SXL PE=2 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 9.712e-18 Identity = 53/154 (34.42%), Postives = 86/154 (55.84%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENVDDAAKAVDALN 462 N+ + L + + + L+ F + G I +C+I D +G S G+ FV F ++ AQNAI LNG+ + +K++ V + E K N++V NL + TD++L+KIFG+YG I ++RD GK + FV F ++A +A+ ALN Sbjct: 86 NLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKSLNGVTVRNKRLKVSYARPGGE------SIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFNKREEAQEAISALN 233
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: SXL_MEGSC (Sex-lethal homolog OS=Megaselia scalaris GN=SXL PE=2 SV=3) HSP 1 Score: 87.0409 bits (214), Expect = 4.820e-17 Identity = 54/157 (34.39%), Postives = 87/157 (55.41%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLR---KQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRD-GDGKSKCFGFVNFENVDDAAKAVDALN 462 N+ + L + + + L+ F + G I +C+I D +G S G+GFV F ++ A AI+ LNG+ + +K++ V F R +Q R+T N++V NL S TDE L+ IFG+YG I ++RD G + F+ F ++A +A+ ALN Sbjct: 79 NLIVNYLPQDMQDRELYSLFRTIGPINTCRIMRDYKTGYSYGYGFVDFGSEADALRAINNLNGITVRNKRIKVS-FARPGGEQLRDT--------NLYVTNLSRSITDEQLETIFGKYGQIVQKNILRDKHTGTPRGVAFIRFNKREEAQEAISALN 226
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: SXL_MUSDO (Sex-lethal homolog OS=Musca domestica GN=SXL PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 6.295e-17 Identity = 51/154 (33.12%), Postives = 86/154 (55.84%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATD-GSGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYGTITSAVVMRDG-DGKSKCFGFVNFENVDDAAKAVDALN 462 N+ + L + + + L+ F + G I +C+I D +G S G+ FV F ++ AQNAI +NG+ + +K++ V + E K N++V NL + TD++L+KIFG+YG I ++RD G+ + FV F ++A +A+ ALN Sbjct: 103 NLIVNYLPQDMTDRELYALFRTCGPINTCRIMKDYKTGYSFGYAFVDFASEIDAQNAIKTVNGITVRNKRLKVSYARPGGE------SIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFNKREEAQEAISALN 250
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: ELAV2_XENTR (ELAV-like protein 2 OS=Xenopus tropicalis GN=elavl2 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 1.402e-16 Identity = 48/157 (30.57%), Postives = 88/157 (56.05%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYG-TITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKK 471 N+ + L +++ + L F S G I SCK+ D +GQS G+GFV + + + A+ AI+ LNG+ + K + V + + + N++V L ++ T ++L+++F +YG ITS +++ G S+ GF+ F+ +A +A+ LNG+K Sbjct: 68 NLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY------ARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQK 218
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: ELAV2_PONAB (ELAV-like protein 2 OS=Pongo abelii GN=ELAVL2 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.832e-16 Identity = 48/157 (30.57%), Postives = 88/157 (56.05%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYG-TITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKK 471 N+ + L +++ + L F S G I SCK+ D +GQS G+GFV + + + A+ AI+ LNG+ + K + V + + + N++V L ++ T ++L+++F +YG ITS +++ G S+ GF+ F+ +A +A+ LNG+K Sbjct: 40 NLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY------ARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQK 190
BLAST of FE659327 vs. ExPASy Swiss-Prot
Match: ELAV2_MOUSE (ELAV-like protein 2 OS=Mus musculus GN=Elavl2 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.832e-16 Identity = 48/157 (30.57%), Postives = 88/157 (56.05%), Query Frame = 1 Query: 7 NIFIKNLDKSIDHKALHDTFSSFGNILSCKIATDG-SGQSKGFGFVQFENKESAQNAIDKLNGMLINDKQVFVGHFLRKQERETVAIKTKFNNVFVKNLDESTTDEDLKKIFGEYG-TITSAVVMRDGDGKSKCFGFVNFENVDDAAKAVDALNGKK 471 N+ + L +++ + L F S G I SCK+ D +GQS G+GFV + + + A+ AI+ LNG+ + K + V + + + N++V L ++ T ++L+++F +YG ITS +++ G S+ GF+ F+ +A +A+ LNG+K Sbjct: 40 NLIVNYLPQNMTQEELKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSY------ARPSSASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIKGLNGQK 190 The following BLAST results are available for this feature:
BLAST of FE659327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 150
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FE659327 ID=FE659327; Name=FE659327; organism=Citrus sinensis; type=EST; length=489bpback to top |