FE659325

Overview
NameFE659325
Unique NameFE659325
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length498
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FE659325 vs. ExPASy Swiss-Prot
Match: ACT_CHLRE (Actin OS=Chlamydomonas reinhardtii PE=2 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 5.175e-70
Identity = 123/134 (91.79%), Postives = 130/134 (97.01%), Query Frame = 1 
Query:   97 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAM 498
            MAD  ++  LVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQSKRGILTL+YPIEHGIV+NWDDMEKIWHHTF+NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAM
Sbjct:    1 MADEGEVSALVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGILTLRYPIEHGIVTNWDDMEKIWHHTFFNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAM 134
[Close]
BLAST of FE659325 vs. ExPASy Swiss-Prot
Match: ACT_SCHDU (Actin OS=Scherffelia dubia PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 6.759e-70
Identity = 125/135 (92.59%), Postives = 130/135 (96.30%), Query Frame = 1 
Query:   97 MADAE-DIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAM 498
            MAD + ++  LVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHG+VSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAM
Sbjct:    1 MADGDGEVSALVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAM 135
[Close]
BLAST of FE659325 vs. ExPASy Swiss-Prot
Match: ACT_VOLCA (Actin OS=Volvox carteri PE=3 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 1.506e-69
Identity = 122/134 (91.04%), Postives = 130/134 (97.01%), Query Frame = 1 
Query:   97 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAM 498
            MA+  ++  LVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQSKRGILTL+YPIEHGIV+NWDDMEKIWHHTF+NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAM
Sbjct:    1 MAEEGEVSALVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGILTLRYPIEHGIVTNWDDMEKIWHHTFFNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAM 134
[Close]
BLAST of FE659325 vs. ExPASy Swiss-Prot
Match: ACT22_DICDI (Putative actin-22 OS=Dictyostelium discoideum GN=act22 PE=3 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 1.506e-69
Identity = 123/132 (93.18%), Postives = 127/132 (96.21%), Query Frame = 1 
Query:  103 DAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAM 498
            D ED+Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAM
Sbjct:    2 DGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 133
[Close]
BLAST of FE659325 vs. ExPASy Swiss-Prot
Match: ACT1_DICDI (Major actin OS=Dictyostelium discoideum GN=act1 PE=1 SV=2)

HSP 1 Score: 261.536 bits (667), Expect = 1.506e-69
Identity = 123/132 (93.18%), Postives = 127/132 (96.21%), Query Frame = 1 
Query:  103 DAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAM 498
            D ED+Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAM
Sbjct:    2 DGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 133
[Close]
BLAST of FE659325 vs. ExPASy Swiss-Prot
Match: ACTS_CARAU (Actin, alpha skeletal muscle OS=Carassius auratus GN=acta1 PE=2 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 2.569e-69
Identity = 121/134 (90.30%), Postives = 128/134 (95.52%), Query Frame = 1 
Query:   97 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAM 498
            M D E++  LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETFNVPAM
Sbjct:    1 MCDDEEVTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAM 134
[Close]
BLAST of FE659325 vs. ExPASy Swiss-Prot
Match: ACTA_PHYPO (Actin, plasmodial isoform OS=Physarum polycephalum GN=ARDA PE=1 SV=2)

HSP 1 Score: 259.996 bits (663), Expect = 4.381e-69
Identity = 122/132 (92.42%), Postives = 127/132 (96.21%), Query Frame = 1 
Query:  103 DAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAM 498
            + ED+Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAM
Sbjct:    2 EGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 133
[Close]
BLAST of FE659325 vs. ExPASy Swiss-Prot
Match: ACT10_DICDI (Actin-10 OS=Dictyostelium discoideum GN=act10 PE=1 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 4.381e-69
Identity = 122/132 (92.42%), Postives = 127/132 (96.21%), Query Frame = 1 
Query:  103 DAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAM 498
            + ED+Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAM
Sbjct:    2 EGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 133
[Close]
BLAST of FE659325 vs. ExPASy Swiss-Prot
Match: ACTS_ORYLA (Actin, alpha skeletal muscle OS=Oryzias latipes GN=acta1 PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 7.473e-69
Identity = 121/134 (90.30%), Postives = 127/134 (94.78%), Query Frame = 1 
Query:   97 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAM 498
            M D E+   LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETFNVPAM
Sbjct:    1 MCDDEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAM 134
[Close]
BLAST of FE659325 vs. ExPASy Swiss-Prot
Match: ACTC_XENLA (Actin, alpha cardiac muscle 1 OS=Xenopus laevis GN=actc1 PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 7.473e-69
Identity = 121/134 (90.30%), Postives = 127/134 (94.78%), Query Frame = 1 
Query:   97 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAM 498
            M D E+   LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETFNVPAM
Sbjct:    1 MCDDEETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAM 134
The following BLAST results are available for this feature:
BLAST of FE659325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 441
Match NameE-valueIdentityDescription
ACT_CHLRE5.175e-7091.79Actin OS=Chlamydomonas reinhardtii PE=2 SV=1[more]
ACT_SCHDU6.759e-7092.59Actin OS=Scherffelia dubia PE=2 SV=1[more]
ACT_VOLCA1.506e-6991.04Actin OS=Volvox carteri PE=3 SV=1[more]
ACT22_DICDI1.506e-6993.18Putative actin-22 OS=Dictyostelium discoideum GN=a... [more]
ACT1_DICDI1.506e-6993.18Major actin OS=Dictyostelium discoideum GN=act1 PE... [more]
ACTS_CARAU2.569e-6990.30Actin, alpha skeletal muscle OS=Carassius auratus ... [more]
ACTA_PHYPO4.381e-6992.42Actin, plasmodial isoform OS=Physarum polycephalum... [more]
ACT10_DICDI4.381e-6992.42Actin-10 OS=Dictyostelium discoideum GN=act10 PE=1... [more]
ACTS_ORYLA7.473e-6990.30Actin, alpha skeletal muscle OS=Oryzias latipes GN... [more]
ACTC_XENLA7.473e-6990.30Actin, alpha cardiac muscle 1 OS=Xenopus laevis GN... [more]

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Properties
Property NameValue
Genbank descriptionA89 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659325 ID=FE659325; Name=FE659325; organism=Citrus sinensis; type=EST; length=498bp
ACCAAATACAGAGCGATAGAGAGAATCGACACTCTCAGCTAGACTCCATC
TTCGAATTTTTCTCTCGTCGTCTCTTCAATCTAACTTTTATAAAAAATGG
CCGATGCTGAGGATATTCAACCCCTTGTTTGTGACAATGGAACCGGAATG
GTGAAGGCTGGATTTGCTGGAGATGATGCTCCGAGGGCAGTATTCCCTAG
TATTGTTGGTAGGCCTCGACACACTGGAGTCATGGTTGGAATGGGGCAGA
AGGATGCCTATGTTGGTGATGAGGCCCAATCGAAAAGAGGTATTCTTACT
TTGAAATACCCAATTGAGCACGGTATTGTAAGCAACTGGGATGATATGGA
AAAGATCTGGCATCATACCTTCTACAACGAGCTTCGTGTTGCTCCTGAAG
AGCACCCAGTGCTTCTCACTGAGGCACCTCTTAACCCCAAGGCCAACAGA
GAGAAGATGACCCAAATTATGTTTGAAACTTTCAATGTGCCAGCCATG
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