FE659325

Overview
NameFE659325
Unique NameFE659325
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length498
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FE659325 vs. ExPASy Swiss-Prot
Match: ARP5_DICDI (Actin-related protein 5 OS=Dictyostelium discoideum GN=arpE PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 3.191e-11
Identity = 40/127 (31.50%), Postives = 73/127 (57.48%), Query Frame = 1 
Query:  121 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHT-GVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAM 498
            P++ DNG+   +AGFA D +P+ +F S+VG+ + T   +VG   K+   GD ++     LT+K P +  ++ +    E I+ + F+        E+PVL+TE   NP   R+ M++++FE +N+ ++
Sbjct:   32 PIIIDNGSYQCRAGFANDISPKLIFRSLVGKVKSTSSPIVGNSLKE---GDISR-----LTIKSPFDSNLLVHPPSQESIFDYIFHKFGIENEIENPVLITEPTSNPTFCRKYMSELLFECYNIKSV 150
The following BLAST results are available for this feature:
BLAST of FE659325 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 441
Match NameE-valueIdentityDescription
ARP5_DICDI3.191e-1131.50Actin-related protein 5 OS=Dictyostelium discoideu... [more]

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Properties
Property NameValue
Genbank descriptionA89 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659325 ID=FE659325; Name=FE659325; organism=Citrus sinensis; type=EST; length=498bp
ACCAAATACAGAGCGATAGAGAGAATCGACACTCTCAGCTAGACTCCATC
TTCGAATTTTTCTCTCGTCGTCTCTTCAATCTAACTTTTATAAAAAATGG
CCGATGCTGAGGATATTCAACCCCTTGTTTGTGACAATGGAACCGGAATG
GTGAAGGCTGGATTTGCTGGAGATGATGCTCCGAGGGCAGTATTCCCTAG
TATTGTTGGTAGGCCTCGACACACTGGAGTCATGGTTGGAATGGGGCAGA
AGGATGCCTATGTTGGTGATGAGGCCCAATCGAAAAGAGGTATTCTTACT
TTGAAATACCCAATTGAGCACGGTATTGTAAGCAACTGGGATGATATGGA
AAAGATCTGGCATCATACCTTCTACAACGAGCTTCGTGTTGCTCCTGAAG
AGCACCCAGTGCTTCTCACTGAGGCACCTCTTAACCCCAAGGCCAACAGA
GAGAAGATGACCCAAATTATGTTTGAAACTTTCAATGTGCCAGCCATG
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