FE659322

Overview
NameFE659322
Unique NameFE659322
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length382
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FE659322 vs. ExPASy Swiss-Prot
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.441e-11
Identity = 45/124 (36.29%), Postives = 66/124 (53.23%), Query Frame = 3
Query:    6 VTCDLSTNRINSLTIFAGDLPGQIPSEVGDLPYLETLMFHKLPS--LTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIP 371
            V C+ + + I+SL +    L GQIPS  G L  L  L    L S  L+G I    + L +L++L +     SG  P   +QL NL  L++S NN +G+IP S++ L  L  L L  N  +G++P
Sbjct:   59 VECNSNQSSIHSLRLPGTGLVGQIPS--GSLGRLTELRVLSLRSNRLSGQIPSDFSNLTHLRSLYLQHNEFSGEFPTSFTQLNNLIRLDISSNNFTGSIPFSVNNLTHLTGLFLGNNGFSGNLP 180          
BLAST of FE659322 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 4.441e-11
Identity = 42/122 (34.43%), Postives = 69/122 (56.56%), Query Frame = 3
Query:    6 VTCDLSTNRINSLTIFAGDLPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIP 371
            VTC+   N++  + +    L G++  E+G L  L+ L  +   ++TG I   +  L  L +L +   +ISGP+P  + +L  L FL L+ N+LSG IP +L+ +Q L  L +  N+L+G IP
Sbjct:   69 VTCN-PENKVTRVDLGNAKLSGKLVPELGQLLNLQYLELYS-NNITGEIPEELGDLVELVSLDLYANSISGPIPSSLGKLGKLRFLRLNNNSLSGEIPMTLTSVQ-LQVLDISNNRLSGDIP 187          
BLAST of FE659322 vs. ExPASy Swiss-Prot
Match: Y5694_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 OS=Arabidopsis thaliana GN=At5g06940 PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 5.800e-11
Identity = 42/123 (34.15%), Postives = 68/123 (55.28%), Query Frame = 3
Query:    6 VTCDLS-TNRINSLTIFAGDLPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIP 371
            +TC  + T  ++S+ + + +L G+I   + DLPYL T +   L     PI   +++   L+TL +S   I G +PD IS+ ++L  ++ S N++ G IP  L  L  L  L+L  N LTG +P
Sbjct:   67 ITCTRAPTLYVSSINLQSLNLSGEISDSICDLPYL-THLDLSLNFFNQPIPLQLSRCVTLETLNLSSNLIWGTIPDQISEFSSLKVIDFSSNHVEGMIPEDLGLLFNLQVLNLGSNLLTGIVP 188          
BLAST of FE659322 vs. ExPASy Swiss-Prot
Match: RPK2_ARATH (LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana GN=RPK2 PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.575e-11
Identity = 34/107 (31.78%), Postives = 57/107 (53.27%), Query Frame = 3
Query:   63 LPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQ-LTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESF 380
            L G+IP  + ++     ++   +  + GPI  ++  L +L  L +SW  + G +P  + + +  LT+L ++ NNL+G IP S  +L  L  L L  N L+G IP  F
Sbjct:  597 LSGRIPQGLNNMCTSLKILDASVNQIFGPIPTSLGDLASLVALNLSWNQLQGQIPGSLGKKMAALTYLSIANNNLTGQIPQSFGQLHSLDVLDLSSNHLSGGIPHDF 703          
BLAST of FE659322 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.575e-11
Identity = 36/79 (45.57%), Postives = 46/79 (58.23%), Query Frame = 3
Query:  135 SLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIP 371
            SL G I P    L+ L  L +   N+SG +P  +S +T+L  L+LS NNLSG IP SL KL  L    +  NKL+G IP
Sbjct:  544 SLNGSIWPEFGDLRQLHVLNLKNNNLSGNIPANLSGMTSLEVLDLSHNNLSGNIPPSLVKLSFLSTFSVAYNKLSGPIP 622          
BLAST of FE659322 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.575e-11
Identity = 35/111 (31.53%), Postives = 65/111 (58.56%), Query Frame = 3
Query:   42 LTIFAGDLPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPE 374
            L + +    G+IP+E+G +  L+TL      + +G I   +  L++L  L +S  +++G +P     L ++  +++SFN L+G IP+ L +LQ + +L L+ NK+ G IP+
Sbjct:  413 LNLSSNSFKGKIPAELGHIINLDTLDLSG-NNFSGSIPLTLGDLEHLLILNLSRNHLNGTLPAEFGNLRSIQIIDVSFNFLAGVIPTELGQLQNINSLILNNNKIHGKIPD 522          

HSP 2 Score: 65.4698 bits (158), Expect = 9.893e-11
Identity = 44/122 (36.07%), Postives = 65/122 (53.28%), Query Frame = 3
Query:    6 VTCDLSTNRINSLTIFAGDLPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIP 371
            V CD  +  + SL +   +L G+I S +GDL  L+++       L G I   I    +L  +  S   + G +P  IS+L  L FL L  N L+G IP++L+++  L  L L RN+LTG IP
Sbjct:   66 VFCDNVSLNVVSLNLSNLNLGGEISSALGDLMNLQSIDLQG-NKLGGQIPDEIGNCVSLAYVDFSTNLLFGDIPFSISKLKQLEFLNLKNNQLTGPIPATLTQIPNLKTLDLARNQLTGEIP 186          
BLAST of FE659322 vs. ExPASy Swiss-Prot
Match: RLK90_ARATH (Probable inactive receptor kinase RLK902 OS=Arabidopsis thaliana GN=RLK902 PE=1 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.893e-11
Identity = 42/122 (34.43%), Postives = 63/122 (51.64%), Query Frame = 3
Query:    6 VTCDLSTNRINSLTIFAGDLPGQIPSEV-GDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSI 368
            V CD    R+ +L +    L G IP  + G+L  L TL   +L  LTG +   +    +L+ L +     SG +P+ +  L+NL  L L+ N  SG I S    L +L  L+L+ NKL+GS+
Sbjct:   65 VLCD--GGRVTALRLPGETLSGHIPEGIFGNLTQLRTLSL-RLNGLTGSLPLDLGSCSDLRRLYLQGNRFSGEIPEVLFSLSNLVRLNLAENEFSGEISSGFKNLTRLKTLYLENNKLSGSL 183          
The following BLAST results are available for this feature:
BLAST of FE659322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 77
Match NameE-valueIdentityDescription
Y2267_ARATH4.441e-1136.29Probable inactive receptor kinase At2g26730 OS=Ara... [more]
SERK4_ARATH4.441e-1134.43Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
Y5694_ARATH5.800e-1134.15Probably inactive leucine-rich repeat receptor-lik... [more]
RPK2_ARATH7.575e-1131.78LRR receptor-like serine/threonine-protein kinase ... [more]
PSKR1_DAUCA7.575e-1145.57Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
ERL2_ARATH7.575e-1131.53LRR receptor-like serine/threonine-protein kinase ... [more]
RLK90_ARATH9.893e-1134.43Probable inactive receptor kinase RLK902 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionA84 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659322 ID=FE659322; Name=FE659322; organism=Citrus sinensis; type=EST; length=382bp
ACTGCGTCACATGCGATCTCTCCACTAACCGCATCAATTCTCTCACCATC
TTCGCCGGAGATCTCCCCGGCCAGATCCCCTCCGAAGTTGGTGATCTTCC
TTACCTCGAAACCCTAATGTTTCACAAGCTACCCAGCCTCACTGGCCCCA
TACAACCCGCCATTGCCAAGCTCAAAAACCTGAAGACGCTACGTATTAGC
TGGACAAACATTTCTGGGCCGGTTCCTGATTTTATCAGCCAACTCACCAA
CTTAACATTCTTGGAGCTTTCATTTAACAATCTTTCTGGGACGATCCCAA
GTTCACTTTCGAAGCTGCAGAAGCTTGGCGCTCTTCATTTGGACAGAAAC
AAGCTTACGGGTTCAATCCCTGAGTCTTTTGG
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