FE659217

Overview
NameFE659217
Unique NameFE659217
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length470
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FE659217 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSI (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. indica GN=PDR3 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 1.422e-44
Identity = 82/155 (52.90%), Postives = 104/155 (67.10%), Query Frame = -2
Query:    5 SQPFFTQFKASFWKQYWSYWRNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFT 469
            SQ   TQ  A  WKQ  SYWRNP YNA+RF  T  IA+ FG +FWD G K ++ QDL N +G+MY+  LF+G  N  S  PV+ VERTV+YRERAAGM+SA  YA GQV +EI Y   Q  +Y +I+Y+MIGF+W   KFF + +FM  + + FT
Sbjct: 1180 SQSSLTQCMACLWKQNLSYWRNPPYNAVRFFFTTVIALLFGTIFWDLGGKVTKSQDLFNAMGSMYAAVLFIGVMNCTSVQPVVAVERTVFYRERAAGMYSAFPYAFGQVVIEIPYTLVQATVYGIIVYAMIGFEWTAAKFFWYLFFMVFTLLYFT 1334          
BLAST of FE659217 vs. ExPASy Swiss-Prot
Match: PDR7_ORYSJ (Putative pleiotropic drug resistance protein 7 OS=Oryza sativa subsp. japonica GN=PDR7 PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 2.682e-43
Identity = 81/155 (52.26%), Postives = 110/155 (70.97%), Query Frame = -2
Query:    5 SQPFFTQFKASFWKQYWSYWRNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFT 469
            SQPFFTQ  A  WKQ+ SYWRNP Y A R   T  IA+ FG +F + G+K +++ DL N LG+MY+  LF+G  N  +  P++ VERTV+YRE+AAGM+SAL YA  QV +EI ++  QTV+Y LI+YS+IGF W + KFF + +FM+ +F+ FT
Sbjct: 1166 SQPFFTQCMACLWKQHKSYWRNPSYTATRIFFTTVIALIFGTIFLNLGKKINKRLDLFNSLGSMYAAVLFIGIQNGQTVQPIVDVERTVFYREKAAGMYSALPYAFAQVLIEIPHIFLQTVVYGLIVYSLIGFDWTVEKFFWYMFFMFFTFMYFT 1320          
BLAST of FE659217 vs. ExPASy Swiss-Prot
Match: PDR5_ORYSJ (Pleiotropic drug resistance protein 5 OS=Oryza sativa subsp. japonica GN=PDR5 PE=2 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 1.019e-42
Identity = 78/156 (50.00%), Postives = 106/156 (67.95%), Query Frame = -2
Query:    2 SQPFFTQFKASFWKQYWSYWRNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFTL 469
            SQ F  Q  A+ WKQ+ SYW++P YNA+R++MT    + FG +FW +G+      DL NLLGA Y+   FLG  N ++ +PV+ VERTV+YRE+AAGM+S LSYA  Q  VE  Y   Q V+Y +++YSMIG++W+  KFF F +FM A+F  FTL
Sbjct: 1172 SQNFLNQCVANTWKQFQSYWKDPPYNAMRYVMTLLYGLVFGTVFWRRGKNIESVNDLNNLLGATYAAVFFLGAANLLTLLPVVSVERTVFYREKAAGMYSPLSYAFAQGFVEFCYSAVQGVLYTILIYSMIGYEWKADKFFYFLFFMIAAFAYFTL 1327          
BLAST of FE659217 vs. ExPASy Swiss-Prot
Match: PDR15_ORYSJ (Pleiotropic drug resistance protein 15 OS=Oryza sativa subsp. japonica GN=PDR15 PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 1.331e-42
Identity = 78/155 (50.32%), Postives = 104/155 (67.10%), Query Frame = -2
Query:    5 SQPFFTQFKASFWKQYWSYWRNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFT 469
            SQ  F QFK   WKQ+W+YWR+P YN +R       A+  G +FW  G K    +DL  ++G+MY+  LF+G  N+V+  PV+ VERTV+YRERAAGM+SA+ YAL QV VEI YV  +TV+Y LI+Y M+ F+W   KFF FFY  + +F+ FT
Sbjct: 1228 SQSTFNQFKLCLWKQWWTYWRSPDYNLVRIFFALFTALMLGTIFWRVGHKMESSKDLLVIIGSMYAAVLFVGFENSVTVQPVVAVERTVFYRERAAGMYSAIPYALAQVVVEIPYVFVETVIYTLIVYPMMSFQWTPAKFFWFFYVSFFTFLYFT 1382          
BLAST of FE659217 vs. ExPASy Swiss-Prot
Match: TUR2_SPIPO (Pleiotropic drug resistance protein TUR2 OS=Spirodela polyrrhiza GN=TUR2 PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 2.271e-42
Identity = 78/155 (50.32%), Postives = 105/155 (67.74%), Query Frame = -2
Query:    5 SQPFFTQFKASFWKQYWSYWRNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFT 469
            SQ F  Q  A  WKQ+ SYWRNP Y A R   T  IA+ FG +FWD G+K S   DL N +G+MY+  LF+G  NA +  P++ VERTV+YRE+AAGM+SAL YA  QV +E+ ++  QT++Y L++YSMIGF W   KF  + +FM+ +F+ FT
Sbjct: 1163 SQSFVMQCLACLWKQHKSYWRNPSYTATRLFFTVVIALIFGTIFWDLGKKRSTSLDLINAMGSMYAAVLFIGIQNAQTVQPIVDVERTVFYREKAAGMYSALPYAYAQVLIEVPHILVQTLLYGLLVYSMIGFDWTAAKFLWYMFFMFFTFLYFT 1317          
BLAST of FE659217 vs. ExPASy Swiss-Prot
Match: AB35G_ARATH (ABC transporter G family member 35 OS=Arabidopsis thaliana GN=ABCG35 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 1.246e-40
Identity = 72/155 (46.45%), Postives = 105/155 (67.74%), Query Frame = -2
Query:    5 SQPFFTQFKASFWKQYWSYWRNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFT 469
            SQ  + QFK+  WKQ+W+YWR+P YN +RF+ T   ++  G +FW  G K S  QDL  ++GA+Y+  +F+G  N  +  P++ VERTV+YRE+AAGM+SA+ YA+ QV  E+ YV  QT  Y LI+YSM+GF+W+  KF  F +  + SF+ +T
Sbjct: 1160 SQNTWGQFKSCLWKQWWTYWRSPDYNLVRFIFTLATSLMIGSVFWQIGGKRSNVQDLTMVIGAIYAAVVFVGINNCSTVQPMVAVERTVFYREKAAGMYSAIPYAISQVTCELPYVLIQTTYYSLIIYSMVGFEWKASKFLWFIFINYFSFLYWT 1314          
BLAST of FE659217 vs. ExPASy Swiss-Prot
Match: AB36G_ARATH (ABC transporter G family member 36 OS=Arabidopsis thaliana GN=ABCG36 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 2.125e-40
Identity = 72/155 (46.45%), Postives = 105/155 (67.74%), Query Frame = -2
Query:    5 SQPFFTQFKASFWKQYWSYWRNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFT 469
            SQ  + QFK+  WKQ+W+YWR+P YN +RF+ T   ++  G +FW  G   S   DL  ++GA+Y+  +F+G  N  +  P++ VERTV+YRERAAGM+SA+ YA+ QV  E+ YV  QTV Y LI+Y+M+GF+W+  KFF F +  + SF+ +T
Sbjct: 1187 SQNTWGQFKSCLWKQWWTYWRSPDYNLVRFIFTLATSLLIGTVFWQIGGNRSNAGDLTMVIGALYAAIIFVGINNCSTVQPMVAVERTVFYRERAAGMYSAMPYAISQVTCELPYVLIQTVYYSLIVYAMVGFEWKAEKFFWFVFVSYFSFLYWT 1341          
BLAST of FE659217 vs. ExPASy Swiss-Prot
Match: AB29G_ARATH (ABC transporter G family member 29 OS=Arabidopsis thaliana GN=ABCG29 PE=2 SV=2)

HSP 1 Score: 163.696 bits (413), Expect = 3.625e-40
Identity = 77/155 (49.68%), Postives = 99/155 (63.87%), Query Frame = -2
Query:    5 SQPFFTQFKASFWKQYWSYWRNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFT 469
            SQ    QFK+  WKQ+ +YWR P YN  RF  T   A+  G +FW  G K     DL  ++GAMY+  LF+G  N+ S  P+I VER+V+YRERAA M+SAL YAL QV  EI YV  QT  Y LI+Y+M+ F+W L KFF F++  + SF+ FT
Sbjct: 1134 SQSLLGQFKSCLWKQWITYWRTPDYNLARFFFTLAAAVMLGSIFWKVGTKRENANDLTKVIGAMYAAVLFVGVNNSSSVQPLIAVERSVFYRERAAEMYSALPYALAQVVCEIPYVLIQTTYYTLIIYAMMCFEWTLAKFFWFYFVSFMSFLYFT 1288          
BLAST of FE659217 vs. ExPASy Swiss-Prot
Match: PDR6_ORYSJ (Pleiotropic drug resistance protein 6 OS=Oryza sativa subsp. japonica GN=PDR6 PE=2 SV=2)

HSP 1 Score: 163.31 bits (412), Expect = 4.734e-40
Identity = 76/155 (49.03%), Postives = 100/155 (64.52%), Query Frame = -2
Query:    5 SQPFFTQFKASFWKQYWSYWRNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFT 469
            SQPFF Q+ A  WKQ  SYWRNPQY A+RF  T  I++ FG + W  G +   Q D+ N +GAMY+  LF+G TNA S  PVI +ER V YRERAAGM+SAL +A   V VE  Y+  Q+++Y  I YS+  F+W   KF  + +FM+ + + FT
Sbjct: 1168 SQPFFAQYAACLWKQNLSYWRNPQYTAVRFFYTVIISLMFGTICWKFGSRRETQHDIFNAMGAMYAAVLFIGITNATSVQPVISIERFVSYRERAAGMYSALPFAFSLVTVEFPYILVQSLIYGTIFYSLGSFEWTAVKFLWYLFFMYFTLLYFT 1322          
BLAST of FE659217 vs. ExPASy Swiss-Prot
Match: PDR12_ORYSJ (Pleiotropic drug resistance protein 12 OS=Oryza sativa subsp. japonica GN=PDR12 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 6.183e-40
Identity = 72/155 (46.45%), Postives = 101/155 (65.16%), Query Frame = -2
Query:    5 SQPFFTQFKASFWKQYWSYWRNPQYNAIRFLMTATIAIFFGLLFWDKGQKSSRQQDLQNLLGAMYSVCLFLGTTNAVSAIPVICVERTVYYRERAAGMFSALSYALGQVAVEIIYVTAQTVMYVLILYSMIGFKWELGKFFLFFYFMWASFVIFT 469
            SQ    QF+A  WKQ+ +YWR+P YN +RF  T   A+  G +FW  G K      L+ ++GAMY+  +F+G  N  +  P++ +ERTV+YRERAAGM+SA+ YA+ QV +EI YV  QT  Y LI+Y+M+ F+W   KFF FF+  + SF+ FT
Sbjct: 1219 SQSTIGQFRACLWKQWLTYWRSPDYNLVRFSFTLFTALLLGTIFWKIGTKMGNANSLRMVIGAMYTAVMFIGINNCATVQPIVSIERTVFYRERAAGMYSAMPYAIAQVVMEIPYVFVQTAYYTLIVYAMMSFQWTAAKFFWFFFVSYFSFLYFT 1373          
The following BLAST results are available for this feature:
BLAST of FE659217 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
PDR3_ORYSI1.422e-4452.90Pleiotropic drug resistance protein 3 OS=Oryza sat... [more]
PDR7_ORYSJ2.682e-4352.26Putative pleiotropic drug resistance protein 7 OS=... [more]
PDR5_ORYSJ1.019e-4250.00Pleiotropic drug resistance protein 5 OS=Oryza sat... [more]
PDR15_ORYSJ1.331e-4250.32Pleiotropic drug resistance protein 15 OS=Oryza sa... [more]
TUR2_SPIPO2.271e-4250.32Pleiotropic drug resistance protein TUR2 OS=Spirod... [more]
AB35G_ARATH1.246e-4046.45ABC transporter G family member 35 OS=Arabidopsis ... [more]
AB36G_ARATH2.125e-4046.45ABC transporter G family member 36 OS=Arabidopsis ... [more]
AB29G_ARATH3.625e-4049.68ABC transporter G family member 29 OS=Arabidopsis ... [more]
PDR6_ORYSJ4.734e-4049.03Pleiotropic drug resistance protein 6 OS=Oryza sat... [more]
PDR12_ORYSJ6.183e-4046.45Pleiotropic drug resistance protein 12 OS=Oryza sa... [more]

Pages

back to top
Properties
Property NameValue
Genbank description175 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659217 ID=FE659217; Name=FE659217; organism=Citrus sinensis; type=EST; length=470bp
ACAATGTGAAAATGACAAAAGACGCCCACATGAAGTAGAAGAACAAGAAG
AATTTTCCCAGCTCCCACTTGAATCCTATCATCGAGTAAAGGATAAGAAC
ATACATGACAGTTTGAGCTGTCACATATATTATCTCTACTGCAACTTGAC
CAAGTGCATAAGACAGTGCAGAAAACATCCCGGCTGCCCTTTCACGGTAG
TATACCGTTCTCTCAACACAGATAACAGGTATCGCAGACACGGCATTGGT
GGTCCCAAGGAAAAGACAAACCGAATACATAGCTCCTAAAAGATTCTGTA
GATCCTGTTGTCTGGAACTCTTCTGTCCTTTGTCCCAGAAGAGAAGACCG
AAGAAAATGGCGATGGTGGCAGTCATGAGAAATCGAATAGCGTTGTATTG
AGGATTTCTCCAGTAAGACCAATACTGTTTCCAGAAAGAAGCCTTAAATT
GAGTGAAAAATGGTTGGGAG
back to top