FE659184

Overview
NameFE659184
Unique NameFE659184
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length178
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_PHAAU (Cytochrome c OS=Phaseolus aureus PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.423e-24
Identity = 49/53 (92.45%), Postives = 52/53 (98.11%), Query Frame = -1
Query:    2 ASFDEAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 160
            ASFDEAPPGN+K+GEKIFKTKCAQCHTV+KGAGHKQGPNLNGLFGRQSGTT G
Sbjct:    1 ASFDEAPPGNSKSGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAG 53          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_MAIZE (Cytochrome c OS=Zea mays PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 5.839e-24
Identity = 50/53 (94.34%), Postives = 50/53 (94.34%), Query Frame = -1
Query:    2 ASFDEAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 160
            ASF EAPPGN KAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTT G
Sbjct:    1 ASFSEAPPGNPKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTAG 53          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_GOSBA (Cytochrome c OS=Gossypium barbadense PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 7.627e-24
Identity = 48/53 (90.57%), Postives = 51/53 (96.23%), Query Frame = -1
Query:    2 ASFDEAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 160
            ASF +APPG+AKAGEKIFKTKCAQCHTV+KGAGHKQGPNLNGLFGRQSGTT G
Sbjct:    1 ASFQZAPPGBAKAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAG 53          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_SOLLC (Cytochrome c OS=Solanum lycopersicum PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 9.961e-24
Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = -1
Query:    2 ASFDEAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 160
            ASF+EAPPGN KAGEKIFKTKCAQCHTVEKGAGHK+GPNLNGLFGRQSGTT G
Sbjct:    1 ASFNEAPPGNPKAGEKIFKTKCAQCHTVEKGAGHKEGPNLNGLFGRQSGTTAG 53          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_ARUMA (Cytochrome c OS=Arum maculatum PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 9.961e-24
Identity = 50/53 (94.34%), Postives = 50/53 (94.34%), Query Frame = -1
Query:    2 ASFDEAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 160
            ASF EAPPGN KAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTT G
Sbjct:    1 ASFAEAPPGNPKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTAG 53          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_FAGES (Cytochrome c OS=Fagopyrum esculentum PE=1 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.898e-23
Identity = 48/53 (90.57%), Postives = 50/53 (94.34%), Query Frame = -1
Query:    2 ASFDEAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 160
            A+F EAPPGN K+GEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTT G
Sbjct:    1 ATFSEAPPGNIKSGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTAG 53          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_SOLTU (Cytochrome c OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 3.785e-23
Identity = 48/53 (90.57%), Postives = 50/53 (94.34%), Query Frame = -1
Query:    2 ASFDEAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 160
            ASF EAPPGN KAGEKIFKTKCAQCHTV+KGAGHK+GPNLNGLFGRQSGTT G
Sbjct:    1 ASFGEAPPGNPKAGEKIFKTKCAQCHTVDKGAGHKEGPNLNGLFGRQSGTTAG 53          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_FRIAG (Cytochrome c OS=Fritillaria agrestis GN=CYTC PE=3 SV=3)

HSP 1 Score: 106.686 bits (265), Expect = 3.785e-23
Identity = 48/54 (88.89%), Postives = 51/54 (94.44%), Query Frame = -1
Query:    2 MASFDEAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 163
            MASF EAPPG+ K+GEKIFKTKCAQCHTV+KGAGHKQGPNLNGLFGRQSGTT G
Sbjct:    1 MASFSEAPPGDFKSGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAG 54          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_CANSA (Cytochrome c OS=Cannabis sativa PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 8.432e-23
Identity = 45/53 (84.91%), Postives = 51/53 (96.23%), Query Frame = -1
Query:    2 ASFDEAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 160
            ASF++APPG++KAGEKIFKTKCA+CHTV +GAGHKQGPNLNGLFGRQSGTT G
Sbjct:    1 ASFBZAPPGBSKAGEKIFKTKCAECHTVGRGAGHKQGPNLNGLFGRQSGTTAG 53          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_SAMNI (Cytochrome c OS=Sambucus nigra PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.101e-22
Identity = 48/53 (90.57%), Postives = 49/53 (92.45%), Query Frame = -1
Query:    2 ASFDEAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 160
            ASF EAPPGN KAGEKIFKTKC QCHTV+KGAGHKQGPNLNGLFGRQSGTT G
Sbjct:    1 ASFAEAPPGNPKAGEKIFKTKCNQCHTVDKGAGHKQGPNLNGLFGRQSGTTAG 53          
The following BLAST results are available for this feature:
BLAST of FE659184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
CYC_PHAAU3.423e-2492.45Cytochrome c OS=Phaseolus aureus PE=1 SV=1[more]
CYC_MAIZE5.839e-2494.34Cytochrome c OS=Zea mays PE=1 SV=1[more]
CYC_GOSBA7.627e-2490.57Cytochrome c OS=Gossypium barbadense PE=1 SV=1[more]
CYC_SOLLC9.961e-2492.45Cytochrome c OS=Solanum lycopersicum PE=1 SV=2[more]
CYC_ARUMA9.961e-2494.34Cytochrome c OS=Arum maculatum PE=1 SV=1[more]
CYC_FAGES2.898e-2390.57Cytochrome c OS=Fagopyrum esculentum PE=1 SV=1[more]
CYC_SOLTU3.785e-2390.57Cytochrome c OS=Solanum tuberosum PE=1 SV=1[more]
CYC_FRIAG3.785e-2388.89Cytochrome c OS=Fritillaria agrestis GN=CYTC PE=3 ... [more]
CYC_CANSA8.432e-2384.91Cytochrome c OS=Cannabis sativa PE=1 SV=1[more]
CYC_SAMNI1.101e-2290.57Cytochrome c OS=Sambucus nigra PE=1 SV=1[more]

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Properties
Property NameValue
Genbank description82 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659184 ID=FE659184; Name=FE659184; organism=Citrus sinensis; type=EST; length=178bp
ACCCAGGTGTAGTCCCCGATTGCCTTCCAAACAATCCGTTCAAATTAGGA
CCTTGTTTGTGACCGGCGCCTTTCTCGACGGTGTGGCACTGAGCGCACTT
GGTCTTGAAGATCTTCTCTCCGGCCTTTGCATTGCCGGGAGGTGCCTCAT
CAAACGACGCCATTATTGTGGTGTTTTG
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