FE659184

Overview
NameFE659184
Unique NameFE659184
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length178
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_ACENE (Cytochrome c OS=Acer negundo PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 1.101e-22
Identity = 48/53 (90.57%), Postives = 49/53 (92.45%), Query Frame = -1
Query:    2 ASFDEAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 160
            ASF EAPPGN  AGEKIFKTKCAQCHTV+KGAGHKQGPNLNGLFGRQSGTT G
Sbjct:    1 ASFAEAPPGNPAAGEKIFKTKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAG 53          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_GUIAB (Cytochrome c OS=Guizotia abyssinica PE=1 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 1.438e-22
Identity = 47/53 (88.68%), Postives = 50/53 (94.34%), Query Frame = -1
Query:    2 ASFDEAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 160
            ASF EAP G+AKAGEKIFKTKCA+CHTV+KGAGHKQGPNLNGLFGRQSGTT G
Sbjct:    1 ASFAEAPAGDAKAGEKIFKTKCAZCHTVZKGAGHKQGPNLNGLFGRQSGTTAG 53          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_HELAN (Cytochrome c OS=Helianthus annuus GN=CYTC1 PE=1 SV=3)

HSP 1 Score: 103.605 bits (257), Expect = 3.204e-22
Identity = 48/54 (88.89%), Postives = 48/54 (88.89%), Query Frame = -1
Query:    2 MASFDEAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 163
            MASF EAP GN   GEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTT G
Sbjct:    1 MASFAEAPAGNPTTGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTAG 54          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_GINBI (Cytochrome c OS=Ginkgo biloba PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.204e-22
Identity = 45/53 (84.91%), Postives = 50/53 (94.34%), Query Frame = -1
Query:    2 ASFDEAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 160
            A+F EAPPG+ KAGEKIFKTKCA+CHTV+KGAGHKQGPNL+GLFGRQSGTT G
Sbjct:    1 ATFSEAPPGDPKAGEKIFKTKCAZCHTVZKGAGHKQGPNLHGLFGRQSGTTAG 53          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_ALLPO (Cytochrome c OS=Allium porrum PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.218e-21
Identity = 44/53 (83.02%), Postives = 48/53 (90.57%), Query Frame = -1
Query:    2 ASFDEAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 160
            A+F +APPG+ KAG+KIFK KCAQCHTVEKGAGHKQGPNLNGLFGRQSGT  G
Sbjct:    1 ATFSZAPPGBZKAGQKIFKLKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTAAG 53          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_WHEAT (Cytochrome c OS=Triticum aestivum PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 6.043e-21
Identity = 45/53 (84.91%), Postives = 47/53 (88.68%), Query Frame = -1
Query:    2 ASFDEAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 160
            ASF EAPPGN  AG KIFKTKCAQCHTV+ GAGHKQGPNL+GLFGRQSGTT G
Sbjct:    1 ASFSEAPPGNPDAGAKIFKTKCAQCHTVDAGAGHKQGPNLHGLFGRQSGTTAG 53          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_TROMA (Cytochrome c OS=Tropaeolum majus PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 7.892e-21
Identity = 45/53 (84.91%), Postives = 48/53 (90.57%), Query Frame = -1
Query:    2 ASFDEAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 160
            ASF EAP G+ KAG+KIFK KCAQCHTV+KGAGHKQGPNLNGLFGRQSGTT G
Sbjct:    1 ASFAEAPAGDNKAGDKIFKNKCAQCHTVDKGAGHKQGPNLNGLFGRQSGTTAG 53          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_PASSA (Cytochrome c OS=Pastinaca sativa PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.917e-20
Identity = 43/53 (81.13%), Postives = 46/53 (86.79%), Query Frame = -1
Query:    2 ASFDEAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 160
            ASF EAPPG+   G KIFKTKCA+CHTV+ GAGHKQGPNLNGLFGRQSGTT G
Sbjct:    1 ASFAEAPPGDKDVGGKIFKTKCAZCHTVZLGAGHKQGPNLNGLFGRQSGTTAG 53          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_NIGDA (Cytochrome c OS=Nigella damascena PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 5.116e-20
Identity = 39/53 (73.58%), Postives = 49/53 (92.45%), Query Frame = -1
Query:    2 ASFDEAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 160
            ASF++AP G++ +GEKIFKTKCA+CHTV++GAGHK+GPNL+GLFGRQSGT  G
Sbjct:    1 ASFBZAPAGBSASGEKIFKTKCAZCHTVBZGAGHKZGPNLHGLFGRQSGTVAG 53          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_SPIOL (Cytochrome c OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.944e-19
Identity = 42/50 (84.00%), Postives = 44/50 (88.00%), Query Frame = -1
Query:   11 ASFDEAPPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGT 160
            A+F EAPPGN   G KIFKTKCAQCHTV+ GAGHKQGPNLNGLFGRQSGT
Sbjct:    1 ATFSEAPPGNKDVGAKIFKTKCAQCHTVDLGAGHKQGPNLNGLFGRQSGT 50          
The following BLAST results are available for this feature:
BLAST of FE659184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
CYC_ACENE1.101e-2290.57Cytochrome c OS=Acer negundo PE=1 SV=1[more]
CYC_GUIAB1.438e-2288.68Cytochrome c OS=Guizotia abyssinica PE=1 SV=1[more]
CYC_HELAN3.204e-2288.89Cytochrome c OS=Helianthus annuus GN=CYTC1 PE=1 SV... [more]
CYC_GINBI3.204e-2284.91Cytochrome c OS=Ginkgo biloba PE=1 SV=1[more]
CYC_ALLPO1.218e-2183.02Cytochrome c OS=Allium porrum PE=1 SV=1[more]
CYC_WHEAT6.043e-2184.91Cytochrome c OS=Triticum aestivum PE=1 SV=1[more]
CYC_TROMA7.892e-2184.91Cytochrome c OS=Tropaeolum majus PE=1 SV=1[more]
CYC_PASSA3.917e-2081.13Cytochrome c OS=Pastinaca sativa PE=1 SV=1[more]
CYC_NIGDA5.116e-2073.58Cytochrome c OS=Nigella damascena PE=1 SV=1[more]
CYC_SPIOL1.944e-1984.00Cytochrome c OS=Spinacia oleracea PE=1 SV=1[more]

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Properties
Property NameValue
Genbank description82 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659184 ID=FE659184; Name=FE659184; organism=Citrus sinensis; type=EST; length=178bp
ACCCAGGTGTAGTCCCCGATTGCCTTCCAAACAATCCGTTCAAATTAGGA
CCTTGTTTGTGACCGGCGCCTTTCTCGACGGTGTGGCACTGAGCGCACTT
GGTCTTGAAGATCTTCTCTCCGGCCTTTGCATTGCCGGGAGGTGCCTCAT
CAAACGACGCCATTATTGTGGTGTTTTG
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