FE659184

Overview
NameFE659184
Unique NameFE659184
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length178
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_HANAN (Cytochrome c OS=Hansenula anomala PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.142e-11
Identity = 29/45 (64.44%), Postives = 34/45 (75.56%), Query Frame = -1
Query:    2 GNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 136
            G+ K G  +FKT+C QCHTVEKG  HK GPNL+G+FGRQSG   G
Sbjct:    7 GSEKKGATLFKTRCLQCHTVEKGGPHKVGPNLHGIFGRQSGKAEG 51          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_ASPNG (Cytochrome c OS=Aspergillus niger GN=cycA PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.142e-11
Identity = 28/46 (60.87%), Postives = 37/46 (80.43%), Query Frame = -1
Query:    2 PGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 139
            PG++  G K+F+T+CAQCHTVE G  HK GPNL+GLFGR++G + G
Sbjct:    8 PGDSAKGAKLFQTRCAQCHTVEAGGPHKVGPNLHGLFGRKTGQSEG 53          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_ALLMI (Cytochrome c OS=Alligator mississippiensis PE=1 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 1.142e-11
Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = -1
Query:    2 GNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 136
            G+ + G+KIF  KCAQCHTVEKG  HK GPNL+GL GR++G  PG
Sbjct:    2 GDVEKGKKIFVQKCAQCHTVEKGGKHKTGPNLHGLIGRKTGQAPG 46          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_DRONO (Cytochrome c OS=Dromaius novae-hollandiae GN=CYC PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.492e-11
Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = -1
Query:    2 GNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 136
            G+ + G+KIF  KC+QCHTVEKG  HK GPNLNGLFGR++G   G
Sbjct:    2 GDIEKGKKIFVQKCSQCHTVEKGGKHKTGPNLNGLFGRKTGQAEG 46          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC2_XENTR (Cytochrome c, testis-specific OS=Xenopus tropicalis GN=cyct PE=3 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 1.492e-11
Identity = 29/45 (64.44%), Postives = 36/45 (80.00%), Query Frame = -1
Query:    2 GNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 136
            G+A+ G+KIF  KC+QCHTVEKG  HK GPNL+GLFGR++G   G
Sbjct:    2 GDAEKGKKIFVQKCSQCHTVEKGGKHKTGPNLHGLFGRKTGQAEG 46          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_RAT (Cytochrome c, somatic OS=Rattus norvegicus GN=Cycs PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 1.948e-11
Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = -1
Query:    2 GNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 136
            G+ + G+KIF  KCAQCHTVEKG  HK GPNL+GLFGR++G   G
Sbjct:    2 GDVEKGKKIFVQKCAQCHTVEKGGKHKTGPNLHGLFGRKTGQAAG 46          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_MOUSE (Cytochrome c, somatic OS=Mus musculus GN=Cycs PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 1.948e-11
Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = -1
Query:    2 GNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 136
            G+ + G+KIF  KCAQCHTVEKG  HK GPNL+GLFGR++G   G
Sbjct:    2 GDVEKGKKIFVQKCAQCHTVEKGGKHKTGPNLHGLFGRKTGQAAG 46          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_HELAS (Cytochrome c OS=Helix aspersa PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.948e-11
Identity = 29/45 (64.44%), Postives = 33/45 (73.33%), Query Frame = -1
Query:    2 GNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 136
            G A+ G+KIF  KC QCHTVE G  HK GPNL+GLFGR+ G  PG
Sbjct:    1 GZAZKGKKIFTQKCLQCHTVEAGGKHKTGPNLSGLFGRKQGQAPG 45          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_RABIT (Cytochrome c OS=Oryctolagus cuniculus GN=CYCS PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 2.545e-11
Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = -1
Query:    2 GNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 136
            G+ + G+KIF  KCAQCHTVEKG  HK GPNL+GLFGR++G   G
Sbjct:    2 GDVEKGKKIFVQKCAQCHTVEKGGKHKTGPNLHGLFGRKTGQAVG 46          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_LAMGU (Cytochrome c OS=Lama guanicoe GN=CYCS PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 2.545e-11
Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = -1
Query:    2 GNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 136
            G+ + G+KIF  KCAQCHTVEKG  HK GPNL+GLFGR++G   G
Sbjct:    2 GDVEKGKKIFVQKCAQCHTVEKGGKHKTGPNLHGLFGRKTGQAVG 46          
The following BLAST results are available for this feature:
BLAST of FE659184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
CYC_HANAN1.142e-1164.44Cytochrome c OS=Hansenula anomala PE=1 SV=1[more]
CYC_ASPNG1.142e-1160.87Cytochrome c OS=Aspergillus niger GN=cycA PE=1 SV=... [more]
CYC_ALLMI1.142e-1164.44Cytochrome c OS=Alligator mississippiensis PE=1 SV... [more]
CYC_DRONO1.492e-1164.44Cytochrome c OS=Dromaius novae-hollandiae GN=CYC P... [more]
CYC2_XENTR1.492e-1164.44Cytochrome c, testis-specific OS=Xenopus tropicali... [more]
CYC_RAT1.948e-1164.44Cytochrome c, somatic OS=Rattus norvegicus GN=Cycs... [more]
CYC_MOUSE1.948e-1164.44Cytochrome c, somatic OS=Mus musculus GN=Cycs PE=1... [more]
CYC_HELAS1.948e-1164.44Cytochrome c OS=Helix aspersa PE=1 SV=1[more]
CYC_RABIT2.545e-1164.44Cytochrome c OS=Oryctolagus cuniculus GN=CYCS PE=1... [more]
CYC_LAMGU2.545e-1164.44Cytochrome c OS=Lama guanicoe GN=CYCS PE=1 SV=2[more]

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Properties
Property NameValue
Genbank description82 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659184 ID=FE659184; Name=FE659184; organism=Citrus sinensis; type=EST; length=178bp
ACCCAGGTGTAGTCCCCGATTGCCTTCCAAACAATCCGTTCAAATTAGGA
CCTTGTTTGTGACCGGCGCCTTTCTCGACGGTGTGGCACTGAGCGCACTT
GGTCTTGAAGATCTTCTCTCCGGCCTTTGCATTGCCGGGAGGTGCCTCAT
CAAACGACGCCATTATTGTGGTGTTTTG
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