FE659184

Overview
NameFE659184
Unique NameFE659184
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length178
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_ESCGI (Cytochrome c OS=Eschrichtius gibbosus GN=CYCS PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 2.545e-11
Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = -1
Query:    2 GNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 136
            G+ + G+KIF  KCAQCHTVEKG  HK GPNL+GLFGR++G   G
Sbjct:    2 GDVEKGKKIFVQKCAQCHTVEKGGKHKTGPNLHGLFGRKTGQAVG 46          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_CHESE (Cytochrome c OS=Chelydra serpentina PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 2.545e-11
Identity = 29/45 (64.44%), Postives = 34/45 (75.56%), Query Frame = -1
Query:    2 GNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 136
            G+ + G+KIF  KCAQCHTVEKG  HK GPNLNGL GR++G   G
Sbjct:    2 GDVEKGKKIFVQKCAQCHTVEKGGKHKTGPNLNGLIGRKTGQAEG 46          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_CAMDR (Cytochrome c OS=Camelus dromedarius GN=CYCS PE=1 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 2.545e-11
Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = -1
Query:    2 GNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 136
            G+ + G+KIF  KCAQCHTVEKG  HK GPNL+GLFGR++G   G
Sbjct:    2 GDVEKGKKIFVQKCAQCHTVEKGGKHKTGPNLHGLFGRKTGQAVG 46          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_THELA (Cytochrome c OS=Thermomyces lanuginosus PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.324e-11
Identity = 27/46 (58.70%), Postives = 37/46 (80.43%), Query Frame = -1
Query:    2 PGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 139
            PG+A  G  +FKT+CAQCH+VE+G  +K GPNL+GLFGR++G+  G
Sbjct:    8 PGDASKGANLFKTRCAQCHSVEQGGANKIGPNLHGLFGRKTGSVEG 53          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_PACTA (Cytochrome c OS=Pachysolen tannophilus GN=CYC1 PE=3 SV=3)

HSP 1 Score: 67.0106 bits (162), Expect = 3.324e-11
Identity = 28/45 (62.22%), Postives = 32/45 (71.11%), Query Frame = -1
Query:    2 GNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 136
            G+AK G  +FKT+C QCHT E G  HK GPNLNG+FGR SG   G
Sbjct:    8 GSAKKGATLFKTRCLQCHTTEAGGAHKVGPNLNGVFGRHSGQAEG 52          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_LAMTR (Cytochrome c OS=Lampetra tridentata GN=cyc PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 3.324e-11
Identity = 27/45 (60.00%), Postives = 35/45 (77.78%), Query Frame = -1
Query:    2 GNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 136
            G+ + G+K+F  KC+QCHTVEK   HK GPNL+GLFGR++G  PG
Sbjct:    2 GDVEKGKKVFVQKCSQCHTVEKAGKHKTGPNLSGLFGRKTGQAPG 46          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_ASHGO (Cytochrome c OS=Ashbya gossypii GN=CYC1 PE=3 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 3.324e-11
Identity = 28/46 (60.87%), Postives = 33/46 (71.74%), Query Frame = -1
Query:    2 PGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 139
            PG+ K G  +FKT+C QCHT EKG  HK GPNL+G+F RQSG   G
Sbjct:    7 PGSEKKGATLFKTRCLQCHTTEKGGPHKVGPNLHGVFSRQSGQVSG 52          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC1A_XENLA (Cytochrome c, somatic A OS=Xenopus laevis GN=cycs-A PE=3 SV=3)

HSP 1 Score: 67.0106 bits (162), Expect = 3.324e-11
Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = -1
Query:    2 GNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 136
            G+A+ G+KIF  KCAQCHTVEK   HK GPNL GLFGR++G  PG
Sbjct:    2 GDAEKGKKIFIQKCAQCHTVEKTGKHKTGPNLWGLFGRKTGQAPG 46          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_USTSP (Cytochrome c OS=Ustilago sphaerogena PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.341e-11
Identity = 29/45 (64.44%), Postives = 36/45 (80.00%), Query Frame = -1
Query:    2 GNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 136
            G+AK G +IFKT+CAQCHT+  G  +K GPNL+GLFGR+SGT  G
Sbjct:    5 GDAKKGARIFKTRCAQCHTLGAGEPNKVGPNLHGLFGRKSGTVEG 49          
BLAST of FE659184 vs. ExPASy Swiss-Prot
Match: CYC_MANSE (Cytochrome c OS=Manduca sexta PE=1 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 4.341e-11
Identity = 27/47 (57.45%), Postives = 35/47 (74.47%), Query Frame = -1
Query:    2 PPGNAKAGEKIFKTKCAQCHTVEKGAGHKQGPNLNGLFGRQSGTTPG 142
            P G+ + G+K+F  +CAQCHTVE G  HK GPNL+G FGR++G  PG
Sbjct:    4 PAGDVEKGKKLFVQRCAQCHTVEAGGKHKIGPNLHGFFGRKTGQAPG 50          
The following BLAST results are available for this feature:
BLAST of FE659184 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 98
Match NameE-valueIdentityDescription
CYC_ESCGI2.545e-1164.44Cytochrome c OS=Eschrichtius gibbosus GN=CYCS PE=1... [more]
CYC_CHESE2.545e-1164.44Cytochrome c OS=Chelydra serpentina PE=1 SV=2[more]
CYC_CAMDR2.545e-1164.44Cytochrome c OS=Camelus dromedarius GN=CYCS PE=1 S... [more]
CYC_THELA3.324e-1158.70Cytochrome c OS=Thermomyces lanuginosus PE=1 SV=1[more]
CYC_PACTA3.324e-1162.22Cytochrome c OS=Pachysolen tannophilus GN=CYC1 PE=... [more]
CYC_LAMTR3.324e-1160.00Cytochrome c OS=Lampetra tridentata GN=cyc PE=1 SV... [more]
CYC_ASHGO3.324e-1160.87Cytochrome c OS=Ashbya gossypii GN=CYC1 PE=3 SV=2[more]
CYC1A_XENLA3.324e-1166.67Cytochrome c, somatic A OS=Xenopus laevis GN=cycs-... [more]
CYC_USTSP4.341e-1164.44Cytochrome c OS=Ustilago sphaerogena PE=1 SV=1[more]
CYC_MANSE4.341e-1157.45Cytochrome c OS=Manduca sexta PE=1 SV=2[more]

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Properties
Property NameValue
Genbank description82 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659184 ID=FE659184; Name=FE659184; organism=Citrus sinensis; type=EST; length=178bp
ACCCAGGTGTAGTCCCCGATTGCCTTCCAAACAATCCGTTCAAATTAGGA
CCTTGTTTGTGACCGGCGCCTTTCTCGACGGTGTGGCACTGAGCGCACTT
GGTCTTGAAGATCTTCTCTCCGGCCTTTGCATTGCCGGGAGGTGCCTCAT
CAAACGACGCCATTATTGTGGTGTTTTG
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