FE659156

Overview
NameFE659156
Unique NameFE659156
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length436
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FE659156 vs. ExPASy Swiss-Prot
Match: SAHH_METC4 (Adenosylhomocysteinase OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=ahcY PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 4.193e-31
Identity = 68/108 (62.96%), Postives = 78/108 (72.22%), Query Frame = -1
Query:    2 ASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXAWKGETLQE 325
            A   ++ VKD+  AD+GR EI +AE EMPGLM+ RAE+G SQP KGAKI GSLHMTIQTAVLIETL ALGA++RW SCNI+STQDH             A KGETL E
Sbjct:    2 AVANDYIVKDIGLADYGRKEISIAETEMPGLMSTRAEYGASQPLKGAKIAGSLHMTIQTAVLIETLKALGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLTE 109          
BLAST of FE659156 vs. ExPASy Swiss-Prot
Match: SAHH_BRASB (Adenosylhomocysteinase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=ahcY PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 4.193e-31
Identity = 67/104 (64.42%), Postives = 77/104 (74.04%), Query Frame = -1
Query:    2 EFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXAWKGETLQE 313
            ++ VKD+S A+FGR EI LAE EMPGLMA R E+GP QP KGA+I GSLHMTIQTAVLIETL ALGA++RW SCNI+STQDH             A KGETL +
Sbjct:    9 DYIVKDISLAEFGRKEISLAETEMPGLMATREEYGPKQPLKGARIAGSLHMTIQTAVLIETLAALGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLAD 112          
BLAST of FE659156 vs. ExPASy Swiss-Prot
Match: SAHH_MYCPA (Adenosylhomocysteinase OS=Mycobacterium paratuberculosis GN=ahcY PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 5.476e-31
Identity = 71/116 (61.21%), Postives = 81/116 (69.83%), Query Frame = -1
Query:    2 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH---------XXXXXXXXXXXXXAWKGETLQE 322
            +G EFKV DLS AD+GR +IEL+E EMPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETL ALGAEVRW SCNIFSTQDH                      AWKGETL+E
Sbjct:   14 NGIEFKVADLSLADYGRRDIELSEQEMPGLMSLRREYHDVQPLKGARISGSLHMTVQTAVLIETLVALGAEVRWASCNIFSTQDHAAAAVVVGPHGTPEEPRGVPVFAWKGETLEE 129          
BLAST of FE659156 vs. ExPASy Swiss-Prot
Match: SAHH_METS4 (Adenosylhomocysteinase OS=Methylobacterium sp. (strain 4-46) GN=ahcY PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 5.476e-31
Identity = 68/107 (63.55%), Postives = 78/107 (72.90%), Query Frame = -1
Query:    2 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXAWKGETLQE 322
            S +++ V+D+  ADFGR EI +AE EMPGLMA RAE+  SQP KGAKI GSLHMTIQTAVLIETL ALGA++RW SCNI+STQDH             A KGETL E
Sbjct:    3 SNQDYIVRDIGLADFGRKEIAIAETEMPGLMAVRAEYAASQPLKGAKIAGSLHMTIQTAVLIETLKALGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLTE 109          
BLAST of FE659156 vs. ExPASy Swiss-Prot
Match: SAHH_RHOP2 (Adenosylhomocysteinase OS=Rhodopseudomonas palustris (strain HaA2) GN=ahcY PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 9.341e-31
Identity = 67/109 (61.47%), Postives = 79/109 (72.48%), Query Frame = -1
Query:    2 SASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXAWKGETLQE 328
            +A   ++ VKD+  A+FGR EI LAE EMPGLMA R E+GP QP KGA+I GSLHMTIQTAVLIETL ALGA+VRW SCNI+STQDH             A KGE+L++
Sbjct:    2 TAKFTDYIVKDIGLAEFGRKEISLAETEMPGLMATREEYGPKQPLKGARIAGSLHMTIQTAVLIETLVALGADVRWVSCNIYSTQDHAAAAIAAAGIPVFAIKGESLED 110          
BLAST of FE659156 vs. ExPASy Swiss-Prot
Match: SAHH_MYCUA (Adenosylhomocysteinase OS=Mycobacterium ulcerans (strain Agy99) GN=ahcY PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 9.341e-31
Identity = 69/116 (59.48%), Postives = 81/116 (69.83%), Query Frame = -1
Query:    2 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH---------XXXXXXXXXXXXXAWKGETLQE 322
            +G +FK+ DLS ADFGR E+ +AE EMPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFSTQDH                      AWKGE+L+E
Sbjct:   14 NGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAVVVGPHGTPEEPKGVPVFAWKGESLEE 129          
BLAST of FE659156 vs. ExPASy Swiss-Prot
Match: SAHH_MYCMM (Adenosylhomocysteinase OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=ahcY PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 9.341e-31
Identity = 69/116 (59.48%), Postives = 81/116 (69.83%), Query Frame = -1
Query:    2 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH---------XXXXXXXXXXXXXAWKGETLQE 322
            +G +FK+ DLS ADFGR E+ +AE EMPGLM+ R E+   QP KGA+I+GSLHMT+QTAVLIETLTALGAEVRW SCNIFSTQDH                      AWKGE+L+E
Sbjct:   14 NGIDFKIADLSLADFGRKELRIAEHEMPGLMSLRREYAEVQPLKGARISGSLHMTVQTAVLIETLTALGAEVRWASCNIFSTQDHAAAAVVVGPHGTPEEPKGVPVFAWKGESLEE 129          
BLAST of FE659156 vs. ExPASy Swiss-Prot
Match: SAHH_METPB (Adenosylhomocysteinase OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=ahcY PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 9.341e-31
Identity = 67/108 (62.04%), Postives = 78/108 (72.22%), Query Frame = -1
Query:    2 ASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXAWKGETLQE 325
            A+  ++ V+D+  AD+GR EI +AE EMPGLMA RAE+G SQP KGAKI GSLHMTIQTAVLIETL  LGA++RW SCNI+STQDH             A KGETL E
Sbjct:    2 AAANDYIVRDIGLADYGRKEISIAETEMPGLMATRAEYGASQPLKGAKIAGSLHMTIQTAVLIETLKHLGADIRWVSCNIYSTQDHAAAAIAAAGIPVFAVKGETLTE 109          
BLAST of FE659156 vs. ExPASy Swiss-Prot
Match: SAHH_NOCFA (Adenosylhomocysteinase OS=Nocardia farcinica GN=ahcY PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 1.220e-30
Identity = 70/116 (60.34%), Postives = 81/116 (69.83%), Query Frame = -1
Query:    2 SGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDH---------XXXXXXXXXXXXXAWKGETLQE 322
            +G ++KV DL+ A+FGR EI LAE EMPGLMA R E+   QP KGA+I+GSLHMT+QTAVLIETLTALGA+VRW SCNIFSTQDH                      AWKGETL+E
Sbjct:   18 NGIDYKVADLTLAEFGRKEIRLAEHEMPGLMALRREYADVQPLKGARISGSLHMTVQTAVLIETLTALGAQVRWASCNIFSTQDHAAAAVVVGPHGTVEEPKGVSVFAWKGETLEE 133          
BLAST of FE659156 vs. ExPASy Swiss-Prot
Match: SAHH_YEAST (Adenosylhomocysteinase OS=Saccharomyces cerevisiae GN=SAH1 PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 1.593e-30
Identity = 68/109 (62.39%), Postives = 76/109 (69.72%), Query Frame = -1
Query:    2 SASGREFKVKDLSQADFGRLEIELAEVEMPGLMACRAEFGPSQPFKGAKITGSLHMTIQTAVLIETLTALGAEVRWCSCNIFSTQDHXXXXXXXXXXXXXAWKGETLQE 328
            SA  + +K+ D+S A FGR EIELAE EMPGLMA R  +G  QP KGA+I G LHMTIQTAVLIETL ALGAEV W SCNI+STQDH             AWKGET +E
Sbjct:    2 SAPAQNYKIADISLAAFGRKEIELAEHEMPGLMAIRKAYGDVQPLKGARIAGCLHMTIQTAVLIETLVALGAEVTWSSCNIYSTQDHAAAAIAASGVPVFAWKGETEEE 110          
The following BLAST results are available for this feature:
BLAST of FE659156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 228
Match NameE-valueIdentityDescription
SAHH_METC44.193e-3162.96Adenosylhomocysteinase OS=Methylobacterium chlorom... [more]
SAHH_BRASB4.193e-3164.42Adenosylhomocysteinase OS=Bradyrhizobium sp. (stra... [more]
SAHH_MYCPA5.476e-3161.21Adenosylhomocysteinase OS=Mycobacterium paratuberc... [more]
SAHH_METS45.476e-3163.55Adenosylhomocysteinase OS=Methylobacterium sp. (st... [more]
SAHH_RHOP29.341e-3161.47Adenosylhomocysteinase OS=Rhodopseudomonas palustr... [more]
SAHH_MYCUA9.341e-3159.48Adenosylhomocysteinase OS=Mycobacterium ulcerans (... [more]
SAHH_MYCMM9.341e-3159.48Adenosylhomocysteinase OS=Mycobacterium marinum (s... [more]
SAHH_METPB9.341e-3162.04Adenosylhomocysteinase OS=Methylobacterium populi ... [more]
SAHH_NOCFA1.220e-3060.34Adenosylhomocysteinase OS=Nocardia farcinica GN=ah... [more]
SAHH_YEAST1.593e-3062.39Adenosylhomocysteinase OS=Saccharomyces cerevisiae... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC95 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659156 ID=FE659156; Name=FE659156; organism=Citrus sinensis; type=EST; length=436bp
ACTCCTGGAGGGTCTCACCCTTCCAGGCAAAGACGGAGGCGGAGTCACGT
GCGATGGCGGCGGCCGCGTGGTCTTGGGTTGAGAAGATGTTGCAGGAGCA
CCAGCGGACTTCGGCGCCGAGAGCGGTGAGTGTCTCGATGAGGACGGCCG
TCTGGATGGTCATGTGGAGTGAACCGGTGATCTTGGCTCCTTTGAAAGGC
TGTGAAGGGCCGAACTCGGCGCGGCAAGCCATGAGCCCCGGCATTTCGAC
TTCGGCCAACTCGATTTCGAGGCGGCCGAAGTCAGCCTGGGACAGATCCT
TCACCTTGAATTCACGACCGCTAGCGGATTTCTCGACGGACAAAGCCATG
GTTGATTAATAGAATTGATAGATCTAAAAGAAAGAAGGAAGAGAGGGCAA
TCTACTCTCTCTTTGGAAACTAACCAAACAAAGTGA
back to top