FE659124

Overview
NameFE659124
Unique NameFE659124
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length592
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FE659124 vs. ExPASy Swiss-Prot
Match: KNAT5_ARATH (Homeobox protein knotted-1-like 5 OS=Arabidopsis thaliana GN=KNAT5 PE=1 SV=2)

HSP 1 Score: 263.077 bits (671), Expect = 7.580e-70
Identity = 129/179 (72.07%), Postives = 148/179 (82.68%), Query Frame = 1
Query:    1 TFKEQLQQHVRVHAVEAVMGCREIENTLQALTGVSLGEGTGATMSDDEDDLHMDFSL---DQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQS 528
            +FKEQLQ HV VHA+EA+  C EIE +LQ+LTGVS  E  G TMSDDEDD  ++  +   D S   S  LMGFGPL+PTE ERSLMERV++ELK ELKQGFK +I D+REEI+RKRRAGKLPGDTTSVLK WW+ HSKWPYPTE+DKAKLV+ETGLQLKQINNWFINQRKRNW+SNS +
Sbjct:  190 SFKEQLQHHVCVHAMEAITACWEIEQSLQSLTGVSPSESNGKTMSDDEDDNQVESEVNMFDGSLDGSDCLMGFGPLVPTERERSLMERVKKELKHELKQGFKEKIVDIREEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPTEEDKAKLVQETGLQLKQINNWFINQRKRNWNSNSST 368          
BLAST of FE659124 vs. ExPASy Swiss-Prot
Match: KNOX1_MAIZE (Homeobox protein knotted-1-like 1 (Fragment) OS=Zea mays GN=KNOX1 PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 1.700e-45
Identity = 83/88 (94.32%), Postives = 87/88 (98.86%), Query Frame = 1
Query:  256 VRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSN 519
            VRQELK+ELKQGFKSRIEDVREEILRKRRAGKLPGDTTS+LK WWQ+HSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWH+N
Sbjct:    1 VRQELKLELKQGFKSRIEDVREEILRKRRAGKLPGDTTSILKQWWQEHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHNN 88          
BLAST of FE659124 vs. ExPASy Swiss-Prot
Match: KNOX2_MAIZE (Homeobox protein knotted-1-like 2 (Fragment) OS=Zea mays GN=KNOX2 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 6.258e-40
Identity = 72/88 (81.82%), Postives = 81/88 (92.05%), Query Frame = 1
Query:  256 VRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSN 519
            VRQELK ELKQG++ ++ D+REEILRKRRAGKLPGDT S LK WWQ HSKWPYPTE+DKA+LV+ETGLQLKQINNWFINQRKRNWH+N
Sbjct:    1 VRQELKHELKQGYRDKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHNN 88          
BLAST of FE659124 vs. ExPASy Swiss-Prot
Match: KNOX7_MAIZE (Homeobox protein knotted-1-like 7 (Fragment) OS=Zea mays GN=KNOX7 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.067e-39
Identity = 72/85 (84.71%), Postives = 79/85 (92.94%), Query Frame = 1
Query:  265 ELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSN 519
            ELK ELKQG+K ++ D+REEI+RKRRAGKLPGDT SVLK WWQ HSKWPYPTEDDKA+LV+ETGLQLKQINNWFINQRKRNWHSN
Sbjct:    1 ELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSN 85          
BLAST of FE659124 vs. ExPASy Swiss-Prot
Match: KNOX6_MAIZE (Homeobox protein knotted-1-like 6 (Fragment) OS=Zea mays GN=KNOX6 PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.067e-39
Identity = 72/85 (84.71%), Postives = 79/85 (92.94%), Query Frame = 1
Query:  265 ELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSN 519
            ELK ELKQG+K ++ D+REEI+RKRRAGKLPGDT SVLK WWQ HSKWPYPTEDDKA+LV+ETGLQLKQINNWFINQRKRNWHSN
Sbjct:    1 ELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPTEDDKARLVQETGLQLKQINNWFINQRKRNWHSN 85          
BLAST of FE659124 vs. ExPASy Swiss-Prot
Match: KNOSA_ORYSJ (Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. japonica GN=OSH71 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 5.323e-23
Identity = 61/152 (40.13%), Postives = 78/152 (51.32%), Query Frame = 1
Query:   64 REIENTLQALTGVSLGEGT---GATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 510
            R  +     LTG+     +   GA    D  D  +  S D+  S   D   FG     E    L +   +E+ ++   G  SR+   R E L+KR+ GKLP D  S L  WW  H +WPYPTE+DK +L   TGL  KQINNWFINQRKR+W
Sbjct:  134 RPFDEAASFLTGIHTQLASLCGGAPPPTDNSDEMVGSSEDEPCSGDADAADFGQ----EHSSRLADHELKEMLLKKYSGCLSRL---RSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHW 278          
BLAST of FE659124 vs. ExPASy Swiss-Prot
Match: KNOSA_ORYSI (Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. indica GN=OSH71 PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 5.323e-23
Identity = 61/152 (40.13%), Postives = 78/152 (51.32%), Query Frame = 1
Query:   64 REIENTLQALTGVSLGEGT---GATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 510
            R  +     LTG+     +   GA    D  D  +  S D+  S   D   FG     E    L +   +E+ ++   G  SR+   R E L+KR+ GKLP D  S L  WW  H +WPYPTE+DK +L   TGL  KQINNWFINQRKR+W
Sbjct:  134 RPFDEAASFLTGIHTQLASLCGGAPPPTDNSDEMVGSSEDEPCSGDADAADFGQ----EHSSRLADHELKEMLLKKYSGCLSRL---RSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTEEDKVRLAAMTGLDPKQINNWFINQRKRHW 278          
BLAST of FE659124 vs. ExPASy Swiss-Prot
Match: KNAT2_ARATH (Homeobox protein knotted-1-like 2 OS=Arabidopsis thaliana GN=KNAT2 PE=1 SV=3)

HSP 1 Score: 105.916 bits (263), Expect = 1.549e-22
Identity = 64/159 (40.25%), Postives = 81/159 (50.94%), Query Frame = 1
Query:   46 EAVMGCREIENTLQAL-TGVSLGEGT---GATMSDDEDDLHMDFSLDQSASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 510
            EA     +IE  LQ L TG +        GA  SD+E     D + D S   S+D                     ++LK +L + F S I  ++ E  +K++ GKLP +    L  WW  H+KWPYPTE DK  L EETGL  KQINNWFINQRKR+W
Sbjct:  152 EATTFINKIEMQLQNLCTGPASATALSDDGAVSSDEELREDDDIAADDSQQRSND---------------------RDLKDQLLRKFGSHISSLKLEFSKKKKKGKLPREARQALLDWWNVHNKWPYPTEGDKISLAEETGLDQKQINNWFINQRKRHW 289          
BLAST of FE659124 vs. ExPASy Swiss-Prot
Match: KN1_MAIZE (Homeotic protein knotted-1 OS=Zea mays GN=KN-1 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.450e-22
Identity = 51/116 (43.97%), Postives = 67/116 (57.76%), Query Frame = 1
Query:  178 SASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQ 525
            S S   D  G G    TE        V QELK  L + +   +  +++E+ +K++ GKLP +    L +WW QH KWPYP+E  K  L E TGL LKQINNWFINQRKR+W  + +
Sbjct:  215 SGSSEEDQEGSGG--ETELPEVDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQQLLSWWDQHYKWPYPSETQKVALAESTGLDLKQINNWFINQRKRHWKPSEE 328          
BLAST of FE659124 vs. ExPASy Swiss-Prot
Match: KNOS6_ORYSJ (Homeobox protein knotted-1-like 6 OS=Oryza sativa subsp. japonica GN=OSH1 PE=2 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 4.506e-22
Identity = 51/116 (43.97%), Postives = 66/116 (56.90%), Query Frame = 1
Query:  178 SASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNWHSNSQ 525
            S S   D  G G    TE        V QELK  L + +   +  +++E+ +K++ GKLP D    L  WW+ H KWPYP+E  K  L E TGL LKQINNWFINQRKR+W  + +
Sbjct:  215 SGSSEEDQEGSGG--ETELPEIDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQQLLNWWELHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSDE 328          
The following BLAST results are available for this feature:
BLAST of FE659124 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
KNAT5_ARATH7.580e-7072.07Homeobox protein knotted-1-like 5 OS=Arabidopsis t... [more]
KNOX1_MAIZE1.700e-4594.32Homeobox protein knotted-1-like 1 (Fragment) OS=Ze... [more]
KNOX2_MAIZE6.258e-4081.82Homeobox protein knotted-1-like 2 (Fragment) OS=Ze... [more]
KNOX7_MAIZE1.067e-3984.71Homeobox protein knotted-1-like 7 (Fragment) OS=Ze... [more]
KNOX6_MAIZE1.067e-3984.71Homeobox protein knotted-1-like 6 (Fragment) OS=Ze... [more]
KNOSA_ORYSJ5.323e-2340.13Homeobox protein knotted-1-like 10 OS=Oryza sativa... [more]
KNOSA_ORYSI5.323e-2340.13Homeobox protein knotted-1-like 10 OS=Oryza sativa... [more]
KNAT2_ARATH1.549e-2240.25Homeobox protein knotted-1-like 2 OS=Arabidopsis t... [more]
KN1_MAIZE3.450e-2243.97Homeotic protein knotted-1 OS=Zea mays GN=KN-1 PE=... [more]
KNOS6_ORYSJ4.506e-2243.97Homeobox protein knotted-1-like 6 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionC63 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659124 ID=FE659124; Name=FE659124; organism=Citrus sinensis; type=EST; length=592bp
ACTTTCAAAGAGCAGCTTCAGCAGCACGTCAGAGTCCATGCCGTTGAAGC
TGTCATGGGCTGCCGTGAAATTGAGAATACTTTGCAAGCTCTCACCGGAG
TATCATTGGGTGAAGGGACAGGCGCAACAATGTCTGACGATGAGGATGAC
CTACATATGGATTTCTCTCTTGATCAATCTGCTTCTGATAGTCATGATTT
GATGGGTTTTGGTCCATTACTTCCTACTGAAACTGAAAGGTCTCTTATGG
AAAGAGTTAGACAGGAGTTGAAGATTGAACTGAAGCAGGGTTTTAAATCA
AGAATTGAAGATGTAAGAGAGGAAATATTGAGAAAAAGAAGGGCCGGAAA
ATTGCCCGGTGACACAACTTCAGTGCTCAAGACTTGGTGGCAGCAACACT
CCAAATGGCCATACCCAACTGAAGATGACAAGGCAAAGCTAGTGGAGGAG
ACAGGCTTGCAACTAAAGCAAATCAACAACTGGTTCATCAACCAGAGGAA
GCGCAACTGGCACAGCAACTCCCAGTCTGTGACGTCTTTAAAGTCAAAGC
GCAAAAGCTCTATCTAGCTAGCTTGCTTTTGTGGCTCTGGGG
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