FE659124

Overview
NameFE659124
Unique NameFE659124
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length592
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FE659124 vs. ExPASy Swiss-Prot
Match: KNOX3_MAIZE (Homeobox protein knotted-1-like 3 (Fragment) OS=Zea mays GN=KNOX3 PE=2 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.093e-19
Identity = 40/83 (48.19%), Postives = 59/83 (71.08%), Query Frame = 1
Query:  262 QELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 510
            +ELK +L + +   + ++R+E+ +KR+  KLP +    L +WW+ H +WPYP+E +K  L E TGL+ KQINNWFINQRKR+W
Sbjct:    3 KELKKQLLRKYSGCLGNLRKELCKKRKKDKLPKEARQKLLSWWELHYRWPYPSEMEKIALAESTGLEQKQINNWFINQRKRHW 85          
BLAST of FE659124 vs. ExPASy Swiss-Prot
Match: KNOX8_MAIZE (Homeobox protein knotted-1-like 8 (Fragment) OS=Zea mays GN=KNOX8 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.357e-18
Identity = 40/82 (48.78%), Postives = 55/82 (67.07%), Query Frame = 1
Query:  265 ELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 510
            ELK +L + +   +  +R+E  ++++ GKLP +    L  WW+ H KWPYP+E +K  L E TGL  KQINNWFINQRKR+W
Sbjct:    1 ELKHQLLRKYGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPSETEKMALAETTGLDPKQINNWFINQRKRHW 82          
BLAST of FE659124 vs. ExPASy Swiss-Prot
Match: KNOS7_ORYSJ (Homeobox protein knotted-1-like 7 OS=Oryza sativa subsp. japonica GN=OSH3 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.947e-18
Identity = 59/174 (33.91%), Postives = 93/174 (53.45%), Query Frame = 1
Query:    7 KEQLQQHVRVHAVEAVMGCREIENTLQALTG----VSLGEGTGATMSDDEDDLHMDFSLDQ--SASDSHDLMGFGPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 510
            KE+L + ++    EA    R +E+ L ++       +L   + A +   +DD H D S  +   A++  DL   G + P   +++L        K  L + +   +  +R+E+ +KR+ GKLP +    L TWW+ H +WP P+E +K  L E TGL+ KQINN FINQRKR+W
Sbjct:  150 KEELSRPLQ----EAEEFLRTVESELNSINSGPPLTALISESKAGLDSSDDDEHEDGSGMEMMEAAEDEDL---GIIDPRSDDKAL--------KRHLLRKYSGYLGGLRKELSKKRKKGKLPKEARQKLLTWWELHYRWPNPSEMEKIALAESTGLEQKQINNCFINQRKRHW 308          
BLAST of FE659124 vs. ExPASy Swiss-Prot
Match: KNOS8_ORYSJ (Homeobox protein knotted-1-like 8 OS=Oryza sativa subsp. japonica GN=OSH43 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.148e-17
Identity = 38/83 (45.78%), Postives = 55/83 (66.27%), Query Frame = 1
Query:  262 QELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 510
            ++LK +L + +   + D+R+   ++ + GKLP +    L  WW+ H KWPYP+E +K  L + TGL  KQINNWFINQRKR+W
Sbjct:  206 KQLKHQLLRKYGGSLGDLRQVFSKRTKKGKLPKEARQKLLHWWELHYKWPYPSEMEKMTLAQTTGLDQKQINNWFINQRKRHW 288          
BLAST of FE659124 vs. ExPASy Swiss-Prot
Match: KNOS9_ORYSJ (Homeobox protein knotted-1-like 9 OS=Oryza sativa subsp. japonica GN=Os03g0772100 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.075e-15
Identity = 37/84 (44.05%), Postives = 54/84 (64.29%), Query Frame = 1
Query:  262 QELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKTWWQQH-SKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 510
            ++LK +L   +   + D+R+   ++ + GKLP +    L  WW+ H  KWPYP+E +K  L + TGL  KQI+NWFINQRKR+W
Sbjct:  207 KQLKHQLLMKYGGSLGDLRQAFSKRTKKGKLPKEARLKLLHWWELHYDKWPYPSEVEKMTLAQTTGLDQKQISNWFINQRKRHW 290          
BLAST of FE659124 vs. ExPASy Swiss-Prot
Match: KNOS5_ORYSJ (Putative homeobox protein knotted-1-like 5 OS=Oryza sativa subsp. japonica GN=Os03g0673500 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 4.085e-15
Identity = 45/118 (38.14%), Postives = 61/118 (51.69%), Query Frame = 1
Query:  166 SLDQSAS-DSHDLMGFGPLLPTETERSLMERVRQELKIELKQGFKSRIEDVREEILRKRR--AGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 510
            +LD+  S D  D +  G  LP ++       V    +  L   +   +  +  EI  K++   G LP D    L  WW  H +WPYP+E +KA L E TGL  KQ+ NWFINQRKR+W
Sbjct:  173 ALDEDVSYDYEDEVAGG--LPEKSAAFGENEVTTTTRRHLMNKYSGYLNSLWTEISNKKKNSTGHLPRDARHKLLQWWHLHYRWPYPSEAEKAALAESTGLDKKQVTNWFINQRKRHW 288          
BLAST of FE659124 vs. ExPASy Swiss-Prot
Match: HBX9_DICDI (Homeobox protein 9 OS=Dictyostelium discoideum GN=hbx9 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.517e-13
Identity = 30/60 (50.00%), Postives = 42/60 (70.00%), Query Frame = 1
Query:  325 ILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 504
            I+++++ GKLPG+ TS+LK W  +H+  PYPTE++K  L   T L   QINNWF N R+R
Sbjct:  557 IVKRKKRGKLPGEATSILKKWLFEHNMHPYPTEEEKVALANSTFLSFNQINNWFTNARRR 616          
BLAST of FE659124 vs. ExPASy Swiss-Prot
Match: ME3L2_HUMAN (Putative homeobox protein Meis3-like 2 OS=Homo sapiens GN=MEIS3P2 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.606e-11
Identity = 29/66 (43.94%), Postives = 45/66 (68.18%), Query Frame = 1
Query:  307 EDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 504
            ED+ +E  R ++ G  P   T++++ W  QH   PYP+E+ K +LV++TGL + Q+NNWFIN R+R
Sbjct:  237 EDLDQEPRRNKKRGIFPKVATNIMRAWLFQHLWHPYPSEEQKKQLVQDTGLTILQVNNWFINARRR 302          
BLAST of FE659124 vs. ExPASy Swiss-Prot
Match: MEIS3_HUMAN (Homeobox protein Meis3 OS=Homo sapiens GN=MEIS3 PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 2.098e-11
Identity = 28/66 (42.42%), Postives = 44/66 (66.67%), Query Frame = 1
Query:  307 EDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 504
            ED+ +E  R ++ G  P   T++++ W  QH   PYP+E+ K +L ++TGL + Q+NNWFIN R+R
Sbjct:  254 EDLDQERRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 319          
BLAST of FE659124 vs. ExPASy Swiss-Prot
Match: ME3L1_HUMAN (Putative homeobox protein Meis3-like 1 OS=Homo sapiens GN=MEIS3P1 PE=5 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 2.098e-11
Identity = 28/66 (42.42%), Postives = 44/66 (66.67%), Query Frame = 1
Query:  307 EDVREEILRKRRAGKLPGDTTSVLKTWWQQHSKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 504
            ED+ +E  R ++ G  P   T++++ W  QH   PYP+E+ K +L ++TGL + Q+NNWFIN R+R
Sbjct:  153 EDLDQEPRRNKKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRR 218          
The following BLAST results are available for this feature:
BLAST of FE659124 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
KNOX3_MAIZE2.093e-1948.19Homeobox protein knotted-1-like 3 (Fragment) OS=Ze... [more]
KNOX8_MAIZE1.357e-1848.78Homeobox protein knotted-1-like 8 (Fragment) OS=Ze... [more]
KNOS7_ORYSJ3.947e-1833.91Homeobox protein knotted-1-like 7 OS=Oryza sativa ... [more]
KNOS8_ORYSJ1.148e-1745.78Homeobox protein knotted-1-like 8 OS=Oryza sativa ... [more]
KNOS9_ORYSJ1.075e-1544.05Homeobox protein knotted-1-like 9 OS=Oryza sativa ... [more]
KNOS5_ORYSJ4.085e-1538.14Putative homeobox protein knotted-1-like 5 OS=Oryz... [more]
HBX9_DICDI8.517e-1350.00Homeobox protein 9 OS=Dictyostelium discoideum GN=... [more]
ME3L2_HUMAN1.606e-1143.94Putative homeobox protein Meis3-like 2 OS=Homo sap... [more]
MEIS3_HUMAN2.098e-1142.42Homeobox protein Meis3 OS=Homo sapiens GN=MEIS3 PE... [more]
ME3L1_HUMAN2.098e-1142.42Putative homeobox protein Meis3-like 1 OS=Homo sap... [more]

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Properties
Property NameValue
Genbank descriptionC63 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659124 ID=FE659124; Name=FE659124; organism=Citrus sinensis; type=EST; length=592bp
ACTTTCAAAGAGCAGCTTCAGCAGCACGTCAGAGTCCATGCCGTTGAAGC
TGTCATGGGCTGCCGTGAAATTGAGAATACTTTGCAAGCTCTCACCGGAG
TATCATTGGGTGAAGGGACAGGCGCAACAATGTCTGACGATGAGGATGAC
CTACATATGGATTTCTCTCTTGATCAATCTGCTTCTGATAGTCATGATTT
GATGGGTTTTGGTCCATTACTTCCTACTGAAACTGAAAGGTCTCTTATGG
AAAGAGTTAGACAGGAGTTGAAGATTGAACTGAAGCAGGGTTTTAAATCA
AGAATTGAAGATGTAAGAGAGGAAATATTGAGAAAAAGAAGGGCCGGAAA
ATTGCCCGGTGACACAACTTCAGTGCTCAAGACTTGGTGGCAGCAACACT
CCAAATGGCCATACCCAACTGAAGATGACAAGGCAAAGCTAGTGGAGGAG
ACAGGCTTGCAACTAAAGCAAATCAACAACTGGTTCATCAACCAGAGGAA
GCGCAACTGGCACAGCAACTCCCAGTCTGTGACGTCTTTAAAGTCAAAGC
GCAAAAGCTCTATCTAGCTAGCTTGCTTTTGTGGCTCTGGGG
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