FE659117

Overview
NameFE659117
Unique NameFE659117
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length497
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: CATF_HUMAN (Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 3.335e-29
Identity = 68/165 (41.21%), Postives = 91/165 (55.15%), Query Frame = -2
Query:    2 GNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPL--ICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 490
            G LLSLSEQ+L+DCD           D  C GGL +NAY  +   GGLE E  Y Y G    C F +EK  V + +   +  +E ++AA L   GP+++ +NA  MQ Y  G+S PL  +C    ++H VLLVGYG +        + P+W IKNSWG  WG+ G
Sbjct:  313 GTLLSLSEQELLDCDKM---------DKACMGGLPSNAYSAIKNLGGLETEDDYSYQGHMQSCNFSAEKAKVYINDSVELSQNEQKLAAWLAKRGPISVAINAFGMQFYRHGISRPLRPLCSPWLIDHAVLLVGYGNR-------SDVPFWAIKNSWGTDWGEKG 461          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: CATF_MOUSE (Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 5.689e-29
Identity = 68/165 (41.21%), Postives = 91/165 (55.15%), Query Frame = -2
Query:    2 GNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPL--ICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 490
            G LLSLSEQ+L+DCD           D  C GGL +NAY  +   GGLE E  Y Y G    C F ++   V + +   +  +EN+IAA L   GP+++ +NA  MQ Y  G++ P   +C   +++H VLLVGYG +        N PYW IKNSWG  WG+ G
Sbjct:  291 GTLLSLSEQELLDCDK---------VDKACLGGLPSNAYAAIKNLGGLETEDDYGYQGHVQTCNFSAQMAKVYINDSVELSRNENKIAAWLAQKGPISVAINAFGMQFYRHGIAHPFRPLCSPWFIDHAVLLVGYGNR-------SNIPYWAIKNSWGSDWGEEG 439          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: CATR_MOUSE (Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.655e-28
Identity = 66/166 (39.76%), Postives = 94/166 (56.63%), Query Frame = -2
Query:    2 TGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 493
            TG L  LS Q LVDC      K +G  +NGC GG   NA++Y++  GGLE E++YPY GK G C+++ +     +  F ++P  E+ + A +   GP+  G++A     + Y GG+     C    + HGVL+VGYG KG   +      YW+IKNSWGK+WG  G
Sbjct:  156 TGKLTPLSVQNLVDCS-----KPQG--NNGCLGGDTYNAFQYVLHNGGLESEATYPYEGKDGPCRYNPKNSKAEITGFVSLPQSEDILMAAVATIGPITAGIDASHESFKNYKGGIYHEPNCSSDTVTHGVLVVGYGFKG---IETDGNHYWLIKNSWGKRWGIRG 311          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: CATL1_CANFA (Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 4.077e-27
Identity = 65/167 (38.92%), Postives = 94/167 (56.29%), Query Frame = -2
Query:    2 TGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGK-CQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNA--IFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 493
            TG L+SLSEQ LVDC        +   + GC+GGLM NA++Y+   GGL+ E SYPY+G+  + C +  E  A     F ++P  E  +   +   GP+++ ++A     Q Y  G+     C  K L+HGVL+VGYG +G       N  +WI+KNSWG +WG +G
Sbjct:  155 TGKLVSLSEQNLVDCS-------RAQGNEGCNGGLMDNAFRYVKDNGGLDSEESYPYLGRDTETCNYKPECSAANDTGFVDLPQREKALMKAVATLGPISVAIDAGHQSFQFYKSGIYFDPDCSSKDLDHGVLVVGYGFEGTD----SNNKFWIVKNSWGPEWGWNG 310          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: CATV_NPVST (Viral cathepsin OS=Spodoptera litura multicapsid nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 9.083e-27
Identity = 63/163 (38.65%), Postives = 92/163 (56.44%), Query Frame = -2
Query:    2 NLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 487
            +L+ LSEQQL+DCD           D GC GGLM  A++ +I  GG+E E  YPY G    C+    K+AVR+++     + DE ++   L  +GP+A+ ++ + +  Y  G++   +C    LNH VLLVGYG +        + PYWI KNSWG  WG++G
Sbjct:  169 SLIDLSEQQLLDCDR---------VDQGCDGGLMHLAFQEIIRIGGVEHEIDYPYQGIEYACRLAPSKLAVRLSHCYQYDLRDERKLLELLYKNGPIAVAIDCVDIIDYRSGIA--TVCNDNGLNHAVLLVGYGIE-------NDTPYWIFKNSWGSNWGENG 313          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: TEST2_MOUSE (Testin-2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.186e-26
Identity = 65/166 (39.16%), Postives = 90/166 (54.22%), Query Frame = -2
Query:    2 TGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 493
            TG L+ LSEQ L+DC  S          + CSGG M NA++Y+   GGL  E SYPYIG   KC++ +E  A  V +F  IP  E  +   +   GP+++ ++A     Q Y  G+     C +  LNH VL+VGYG +G          YW++KNSWG++WG  G
Sbjct:  155 TGRLVPLSEQNLLDCMGS-------NVTHDCSGGFMQNAFQYVKDNGGLATEESYPYIGPGRKCRYHAENSAANVRDFVQIPGREEALMKAVAKVGPISVAVDASHDSFQFYDSGIYYEPQCKRVHLNHAVLVVGYGFEG---EESDGNSYWLVKNSWGEEWGMKG 310          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.186e-26
Identity = 66/167 (39.52%), Postives = 95/167 (56.89%), Query Frame = -2
Query:    2 TGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKR-GKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNA--IFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 493
            TG L+SLSEQ LVDC      + +G  + GC+GGLM NA++Y+   GGL+ E SYPY+G+    C +  E  A     F +IP  E  +   +   GP+++ ++A     Q Y  G+     C  K L+HGVL+VGYG +G       +  +WI+KNSWG +WG +G
Sbjct:  155 TGKLVSLSEQNLVDCS-----RPQG--NQGCNGGLMDNAFQYVKDNGGLDTEESYPYLGRETNSCTYKPECSAANDTGFVDIPQREKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTD---SNSSKFWIVKNSWGPEWGWNG 311          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: CATL1_BOVIN (Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3)

HSP 1 Score: 119.013 bits (297), Expect = 1.186e-26
Identity = 65/167 (38.92%), Postives = 91/167 (54.49%), Query Frame = -2
Query:    2 TGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIG-KRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNA--IFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 493
            TG L+SLSEQ LVDC        +   + GC+GGLM NA++Y+   GGL+ E SYPY+      C +  E  A     F +IP  E  +   +   GP+++ ++A     Q Y  G+     C  K L+HGVL+VGYG +G       N  +WI+KNSWG +WG +G
Sbjct:  155 TGKLVSLSEQNLVDCS-------RAQGNQGCNGGLMDNAFQYIKDNGGLDSEESYPYLATDTNSCNYKPECSAANDTGFVDIPQREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTD---SNNNKFWIVKNSWGPEWGWNG 311          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: CATV_NPVMC (Viral cathepsin OS=Mamestra configurata nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.023e-26
Identity = 67/162 (41.36%), Postives = 89/162 (54.94%), Query Frame = -2
Query:    2 LLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVAN-FTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 484
            L+ L+EQQLVDCD           D GC GGL+  AY+ ++  GG+E+E  YPY   R  C     K AV V N +  + + E ++   L H GP+AI ++A+ +  Y GGV     C    LNH VLLVGYG +        N PYW IKNSWG  +G++G
Sbjct:  170 LIDLAEQQLVDCDF---------VDMGCDGGLIHTAYEQIMHIGGVEQEYDYPYKAVRLPCAVKPHKFAVGVRNCYRYVLLSEERLEDLLRHVGPIAIAVDAVDLTDYYGGVIS--FCENNGLNHAVLLVGYGIE-------NNVPYWTIKNSWGSDYGENG 313          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: CATL1_SHEEP (Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.023e-26
Identity = 65/166 (39.16%), Postives = 92/166 (55.42%), Query Frame = -2
Query:    2 TGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNA--IFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 493
            TG L+SLSEQ LVD       + +G  + GC+GGLM NA++Y+   GGL+ E SYPY      C +  E  A +   F +IP  E  +   +   GP+++ ++A     Q Y  G+     C  K L+HGVL+VGYG +G       N  +WI+KNSWG +WG+ G
Sbjct:   42 TGKLVSLSEQNLVDSS-----RPQG--NQGCNGGLMDNAFQYIKENGGLDSEESYPYEATDTSCNYKPEYSAAKDTGFVDIPQREKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYGFEG------TNNKFWIVKNSWGPEWGNKG 194          
The following BLAST results are available for this feature:
BLAST of FE659117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
CATF_HUMAN3.335e-2941.21Cathepsin F OS=Homo sapiens GN=CTSF PE=1 SV=1[more]
CATF_MOUSE5.689e-2941.21Cathepsin F OS=Mus musculus GN=Ctsf PE=2 SV=1[more]
CATR_MOUSE1.655e-2839.76Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1[more]
CATL1_CANFA4.077e-2738.92Cathepsin L1 OS=Canis familiaris GN=CTSL1 PE=2 SV=... [more]
CATV_NPVST9.083e-2738.65Viral cathepsin OS=Spodoptera litura multicapsid n... [more]
TEST2_MOUSE1.186e-2639.16Testin-2 OS=Mus musculus PE=2 SV=1[more]
CATL1_PIG1.186e-2639.52Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
CATL1_BOVIN1.186e-2638.92Cathepsin L1 OS=Bos taurus GN=CTSL1 PE=1 SV=3[more]
CATV_NPVMC2.023e-2641.36Viral cathepsin OS=Mamestra configurata nucleopoly... [more]
CATL1_SHEEP2.023e-2639.16Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC56 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659117 ID=FE659117; Name=FE659117; organism=Citrus sinensis; type=EST; length=497bp
ACCCATGGTCTCCCCATTGCTTGCCCCACGAATTCTTGATGATCCAATAC
GGCTGGTTTCCAAGCCTAAGAATTGAGAAGCCCTTGGCACCATACCCGAC
GAGCAGAACGCCGTGGTTGAGCCATTTCTTGCCGCAGATTAGCGGGCATG
AGACTCCCCCAATGTATGTTTGCATGAATATAGCGTTCAACCCAATAGCC
AGAGGACCGTGGTGGACTAAATGTGCAGCAATTTGGTTCTCATCGACAGG
AATATTGGTAAAATTTGCAACTCGAACGGCTATTTTCTCTGAATCGAATT
GGCATTTGCCACGCTTCCCAATATAAGGATATGAACTCTCCTCTTCTAGC
CCTCCAGTCGCGATCAAATATTTGTATGCATTTGTCATGAGGCCTCCAGA
ACAACCATTGTCACAAGTACCCTTCTCCTTTATATCACACGAGTGATCAC
AATCTACAAGCTGCTGCTCGCTAAGACTGAGAAGATTCCCAGTCGCA
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