FE659117

Overview
NameFE659117
Unique NameFE659117
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length497
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: BROM2_ANACO (Stem bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.401e-11
Identity = 49/165 (29.70%), Postives = 72/165 (43.64%), Query Frame = -2
Query:    2 GNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPL--AIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 490
            G L  LSEQQ++DC        KG    GC GG    A++++I+  G+   + YPY   +G C+ D    +  +  +  +P +      + V   P+  A+  NA F     G  + P  CG   LNH V  +GYG           Q   I    WG +WG+ G
Sbjct:   44 GILEPLSEQQVLDC-------AKGY---GCKGGWEFRAFEFIISNKGVASGAIYPYKAAKGTCKTDGVPNSAYITGYARVPRNNESSMMYAVSKQPITVAVDANANFQYYKSGVFNGP--CGTS-LNHAVTAIGYG-----------QDSIIYPKKWGAKWGEAG 184          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: PEPT1_DERFA (Peptidase 1 OS=Dermatophagoides farinae GN=DERF1 PE=1 SV=2)

HSP 1 Score: 67.0106 bits (162), Expect = 5.350e-11
Identity = 53/165 (32.12%), Postives = 75/165 (45.45%), Query Frame = -2
Query:    2 LSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNI-PVDENQIAAHLVH-HGPLA--IGLNAI-FMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 481
            L LSEQ+LVDC             +GC G  +    +Y I   G+ EE SYPY+ +  +C+  + +    ++N+  I P D  QI   L   H  +A  IG+  +   Q Y G        G +   H V +VGYG+            YWI++NSW   WGD G
Sbjct:  154 LDLSEQELVDC----------ASQHGCHGDTIPRGIEY-IQQNGVVEERSYPYVAREQRCRRPNSQ-HYGISNYCQIYPPDVKQIREALTQTHTAIAVIIGIKDLRAFQHYDGRTIIQHDNGYQPNYHAVNIVGYGSTQ-------GDDYWIVRNSWDTTWGDSG 299          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 5.350e-11
Identity = 51/167 (30.54%), Postives = 77/167 (46.11%), Query Frame = -2
Query:    2 TGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQF-DSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 493
            TGNL   SEQ+L+DCD             GC+GG   +A + L+A  G+   ++YPY G +  C+  +    A +      +         + + + P+++ L A     Q Y GG+     CG K ++H V  VGYG             Y +IKNSWG  WG++G
Sbjct:  175 TGNLNEYSEQELLDCDRR---------SYGCNGGYPWSALQ-LVAQYGIHYRNTYPYEGVQRYCRSREKGPYAAKTDGVRQVQPYNEGALLYSIANQPVSVVLEAAGKDFQLYRGGIFVGP-CGNK-VDHAVAAVGYGPN-----------YILIKNSWGTGWGENG 318          
The following BLAST results are available for this feature:
BLAST of FE659117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
BROM2_ANACO2.401e-1129.70Stem bromelain OS=Ananas comosus PE=1 SV=1[more]
PEPT1_DERFA5.350e-1132.12Peptidase 1 OS=Dermatophagoides farinae GN=DERF1 P... [more]
PAPA1_CARPA5.350e-1130.54Papain OS=Carica papaya PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC56 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659117 ID=FE659117; Name=FE659117; organism=Citrus sinensis; type=EST; length=497bp
ACCCATGGTCTCCCCATTGCTTGCCCCACGAATTCTTGATGATCCAATAC
GGCTGGTTTCCAAGCCTAAGAATTGAGAAGCCCTTGGCACCATACCCGAC
GAGCAGAACGCCGTGGTTGAGCCATTTCTTGCCGCAGATTAGCGGGCATG
AGACTCCCCCAATGTATGTTTGCATGAATATAGCGTTCAACCCAATAGCC
AGAGGACCGTGGTGGACTAAATGTGCAGCAATTTGGTTCTCATCGACAGG
AATATTGGTAAAATTTGCAACTCGAACGGCTATTTTCTCTGAATCGAATT
GGCATTTGCCACGCTTCCCAATATAAGGATATGAACTCTCCTCTTCTAGC
CCTCCAGTCGCGATCAAATATTTGTATGCATTTGTCATGAGGCCTCCAGA
ACAACCATTGTCACAAGTACCCTTCTCCTTTATATCACACGAGTGATCAC
AATCTACAAGCTGCTGCTCGCTAAGACTGAGAAGATTCCCAGTCGCA
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