FE659117

Overview
NameFE659117
Unique NameFE659117
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length497
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 1.110e-24
Identity = 69/171 (40.35%), Postives = 93/171 (54.39%), Query Frame = -2
Query:    2 ATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV---DENQIAAHLVHHGPLAIGLNAI-FMQTYIGGVSCPLICGKKWL--NHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 496
            ATG  +SLSEQQLVDC  + +       + GCSGGL + A++Y+   GGL+ E +YPY G  G C +  E + V+V +  NI +   DE + A  LV   P+++    I   + Y  GV     CG   +  NH VL VGYG +          PYW+IKNSWG  WGD+G
Sbjct:  185 ATGKPVSLSEQQLVDCATAYN-------NFGCSGGLPSQAFEYIKYNGGLDTEEAYPYTGVNGICHYKPENVGVKVLDSVNITLGAEDELKNAVGLVR--PVSVAFQVINGFRMYKSGVYTSDHCGTSPMDVNHAVLAVGYGVE-------NGVPYWLIKNSWGADWGDNG 339          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: LMCPA_LEIME (Cysteine proteinase A OS=Leishmania mexicana GN=LMCPA PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.110e-24
Identity = 64/167 (38.32%), Postives = 92/167 (55.09%), Query Frame = -2
Query:    2 NLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAT--GGLEEESSYPYI---GKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 487
            +L+SLSEQ LV CD+          D GC+GGLM  A  +++ +  G +  E+SYPY    G R  C  D  ++  ++  F ++P DE +IA  +   GP+A+ ++A   Q Y GGV    +C    LNHGVL+VG+        +    PYWI+KNSWG  WG+ G
Sbjct:  172 SLVSLSEQMLVSCDN---------IDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPYTSGGGTRPPCH-DEGEVGAKITGFLSLPHDEERIAEWVEKRGPVAVAVDATTWQLYFGGVVS--LCLAWSLNHGVLIVGFN-------KNAKPPYWIVKNSWGSSWGEKG 319          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: CYSP2_LEIPI (Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS2 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.110e-24
Identity = 71/168 (42.26%), Postives = 88/168 (52.38%), Query Frame = -2
Query:    2 LLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLI--ATGGLEEESSYPYIGKRG---KCQFDSEKIAV--RVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 484
            L+SLSEQQLV CD   D         GC GGLM  A+ +L+    G L  E SYPY+   G   +C   SE++ V  ++     I   E  +AA L  +GP+AI L+A    +Y  GV     C  K LNHGVLLVGY   G         PYW+IKNSWG  WG+ G
Sbjct:  170 LVSLSEQQLVSCDDMND---------GCDGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGYVPECSNSSEELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFMSYKSGVLTA--CIGKQLNHGVLLVGYDMTG-------EVPYWVIKNSWGGDWGEQG 319          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: CYSP1_LEIPI (Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS1 PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 1.110e-24
Identity = 64/167 (38.32%), Postives = 92/167 (55.09%), Query Frame = -2
Query:    2 NLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIAT--GGLEEESSYPYI---GKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 487
            +L+SLSEQ LV CD+          D GC+GGLM  A  +++ +  G +  E+SYPY    G R  C  D  ++  ++  F ++P DE +IA  +   GP+A+ ++A   Q Y GGV    +C    LNHGVL+VG+        +    PYWI+KNSWG  WG+ G
Sbjct:  172 SLVSLSEQMLVSCDN---------IDEGCNGGLMDQAMNWIMQSHNGSVFTEASYPYTSGGGTRPPCH-DEGEVGAKITGFLSLPHDEERIAEWVEKRGPVAVAVDATTWQLYFGGVVS--LCLAWSLNHGVLIVGFN-------KNAKPPYWIVKNSWGSSWGEKG 319          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.110e-24
Identity = 62/167 (37.13%), Postives = 89/167 (53.29%), Query Frame = -2
Query:    2 TGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNA---IFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 493
            TG L+SLSEQ LVDC            + GC+GGLM  A++Y+   GGL+ E SYPY      C+++ E        F +IP  E  +   +   GP+++ ++A    FM  Y  G+     C  + ++HGVL+VGY   GF      N  YW++KNSWG++WG  G
Sbjct:  155 TGKLVSLSEQNLVDCSGPQG-------NEGCNGGLMDYAFQYVADNGGLDSEESYPYEATEESCKYNPEYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFM-FYKEGIYFEPDCSSEDMDHGVLVVGY---GFESTESDNSKYWLVKNSWGEEWGMGG 310          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: CATH_MOUSE (Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.110e-24
Identity = 65/170 (38.24%), Postives = 94/170 (55.29%), Query Frame = -2
Query:    2 ATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAI--FMQTYIGGVSCPLICGK--KWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 496
            A+G +LSL+EQQLVDC  + +       ++GC GGL + A++Y++   G+ EE SYPYIGK   C+F+ +K    V N  NI + DE  +   +  + P++        F+  Y  GV     C K    +NH VL VGYG +   +       YWI+KNSWG QWG++G
Sbjct:  155 ASGKMLSLAEQQLVDCAQAFN-------NHGCKGGLPSQAFEYILYNKGIMEEDSYPYIGKDSSCRFNPQKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFLM-YKSGVYSSKSCHKTPDKVNHAVLAVGYGEQNGLL-------YWIVKNSWGSQWGENG 309          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: CYSP3_HOMAM (Digestive cysteine proteinase 3 OS=Homarus americanus GN=LCP3 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.450e-24
Identity = 60/163 (36.81%), Postives = 85/163 (52.15%), Query Frame = -2
Query:    2 LLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNA--IFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 484
            L+SLSEQQLVDC            ++GC GG MT+A+ Y+   GG++ ESSYPY  +   C+FD+  I         +   E  +   +   GP+++ ++A     Q Y  GV     C   +L+HGVL VGYG +         + YW++KNSWG  WGD G
Sbjct:  150 LVSLSEQQLVDCSTDYG-------NDGCGGGWMTSAFDYIKDNGGIDTESSYPYEAEDRSCRFDANSIGAICTGSVEVQHTEEALQEAVSGVGPISVAIDASHFSFQFYSSGVYYEQNCSPTFLDHGVLAVGYGTE-------STKDYWLVKNSWGSSWGDAG 298          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 1.450e-24
Identity = 63/167 (37.72%), Postives = 94/167 (56.29%), Query Frame = -2
Query:    2 TGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAIFMQ--TYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 493
            TG L+SLS Q LVDC  +    + G  + GC+GG MT A++Y+I   G++ E+SYPY    GKCQ+D +  A   + +  +P   E  +   + + GP+++G++A       Y  GV     C +  +NHGVL+VGYG        L  + YW++KNSWG  +GD G
Sbjct:  156 TGKLVSLSAQNLVDCSTA----KYG--NKGCNGGFMTEAFQYIIDNNGIDSEASYPYKAMDGKCQYDVKNRAATCSRYIELPFGSEEALKEAVANKGPVSVGIDASHSSFFLYKTGVYYDPSCTQN-VNHGVLVVGYG-------NLDGKDYWLVKNSWGLHFGDQG 308          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: CATL1_CHICK (Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.450e-24
Identity = 64/167 (38.32%), Postives = 95/167 (56.89%), Query Frame = -2
Query:    2 GNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGK-CQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNA--IFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 490
            G L+SLSEQ LVDC      + +G  + GC+GGLM  A++Y+   GG++ E SYPY  K  + C++ +E  A     F +IP   E  +   +   GP+++ ++A     Q Y  G+     C  + L+HGVL+VGYG +       G + YWI+KNSWG++WGD G
Sbjct:   43 GKLVSLSEQNLVDCS-----RPEG--NQGCNGGLMDQAFQYVQDNGGIDSEESYPYTAKDDEDCRYKAEYNAANDTGFVDIPQGHERALMKAVASVGPVSVAIDAGHSSFQFYQSGIYYEPDCSSEDLDHGVLVVGYGFE-------GGKKYWIVKNSWGEKWGDKG 195          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: CATK_RAT (Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.450e-24
Identity = 63/167 (37.72%), Postives = 94/167 (56.29%), Query Frame = -2
Query:    2 TGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 493
            TG LL+LS Q LVDC     + E    + GC GG MT A++Y+   GG++ E +YPY+G+   C +++   A +   +  IPV +E  +   +   GP+++ ++A     Q Y  GV     C +  +NH VL+VGYG       + GN+ YWIIKNSWG+ WG+ G
Sbjct:  156 TGKLLALSPQNLVDC-----VSE----NYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGPVSVSIDASLTSFQFYSRGVYYDENCDRDNVNHAVLVVGYGT------QKGNK-YWIIKNSWGESWGNKG 306          
The following BLAST results are available for this feature:
BLAST of FE659117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
ORYC_ORYSJ1.110e-2440.35Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]
LMCPA_LEIME1.110e-2438.32Cysteine proteinase A OS=Leishmania mexicana GN=LM... [more]
CYSP2_LEIPI1.110e-2442.26Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS... [more]
CYSP1_LEIPI1.110e-2438.32Cysteine proteinase 1 OS=Leishmania pifanoi GN=CYS... [more]
CATL1_CERAE1.110e-2437.13Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]
CATH_MOUSE1.110e-2438.24Cathepsin H OS=Mus musculus GN=Ctsh PE=2 SV=1[more]
CYSP3_HOMAM1.450e-2436.81Digestive cysteine proteinase 3 OS=Homarus america... [more]
CATS_BOVIN1.450e-2437.72Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
CATL1_CHICK1.450e-2438.32Cathepsin L1 (Fragments) OS=Gallus gallus GN=CTSL1... [more]
CATK_RAT1.450e-2437.72Cathepsin K OS=Rattus norvegicus GN=Ctsk PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionC56 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659117 ID=FE659117; Name=FE659117; organism=Citrus sinensis; type=EST; length=497bp
ACCCATGGTCTCCCCATTGCTTGCCCCACGAATTCTTGATGATCCAATAC
GGCTGGTTTCCAAGCCTAAGAATTGAGAAGCCCTTGGCACCATACCCGAC
GAGCAGAACGCCGTGGTTGAGCCATTTCTTGCCGCAGATTAGCGGGCATG
AGACTCCCCCAATGTATGTTTGCATGAATATAGCGTTCAACCCAATAGCC
AGAGGACCGTGGTGGACTAAATGTGCAGCAATTTGGTTCTCATCGACAGG
AATATTGGTAAAATTTGCAACTCGAACGGCTATTTTCTCTGAATCGAATT
GGCATTTGCCACGCTTCCCAATATAAGGATATGAACTCTCCTCTTCTAGC
CCTCCAGTCGCGATCAAATATTTGTATGCATTTGTCATGAGGCCTCCAGA
ACAACCATTGTCACAAGTACCCTTCTCCTTTATATCACACGAGTGATCAC
AATCTACAAGCTGCTGCTCGCTAAGACTGAGAAGATTCCCAGTCGCA
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