FE659117

Overview
NameFE659117
Unique NameFE659117
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length497
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.450e-24
Identity = 70/171 (40.94%), Postives = 93/171 (54.39%), Query Frame = -2
Query:    2 ATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV---DENQIAAHLVHHGPLAIGLNAI-FMQTYIGGVSCPLICG--KKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 496
            ATG  +SLSEQQLVDC         G  + GC+GGL + A++Y+   GG++ E SYPY G  G C + +E  AV+V +  NI +   DE + A  LV   P+++    I   + Y  GV     CG     +NH VL VGYG +          PYW+IKNSWG  WGD+G
Sbjct:  184 ATGKNISLSEQQLVDC-------AGGFNNFGCNGGLPSQAFEYIKYNGGIDTEESYPYKGVNGVCHYKAENAAVQVLDSVNITLNAEDELKNAVGLVR--PVSVAFQVIDGFRQYKSGVYTSDHCGTTPDDVNHAVLAVGYGVE-------NGVPYWLIKNSWGADWGDNG 338          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 2.473e-24
Identity = 61/166 (36.75%), Postives = 89/166 (53.61%), Query Frame = -2
Query:    2 TGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 493
            T  L+ LSEQ L+DC  S          +GCSGG M  A++Y+   GGL  E SYPY G+  +C++ +E  A  V +F  IP  E  +   +   GP+++ ++A     Q Y  G+     C +  LNH VL+VGYG +G          +W++KNSWG++WG  G
Sbjct:  155 TERLIPLSEQNLLDCMGS-------NVTHGCSGGFMQYAFQYVKDNGGLATEESYPYRGQGRECRYHAENSAANVRDFVQIPGSEEALMKAVAKVGPISVAVDASHGSFQFYGSGIYYEPQCKRVHLNHAVLVVGYGFEG---EESDGNSFWLVKNSWGEEWGMKG 310          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: CATK_CHICK (Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.230e-24
Identity = 63/167 (37.72%), Postives = 88/167 (52.69%), Query Frame = -2
Query:    2 TGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVD-ENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 493
            TG LLSLS Q LV C  +         +NGC GG MTNA++Y+    G++ E +YPYIG+   C +     A +   +  IP D E  +   +   GP+++G++A     Q Y  GV     C  + +NH VL VGYGA+           +WIIKNSWG +WG+ G
Sbjct:  161 TGKLLSLSPQNLVYCVSN---------NNGCGGGYMTNAFEYVRLNRGIDSEDAYPYIGQDESCMYSPTGKAAKCRGYREIPEDNEKALKRAVARIGPVSVGIDASLPSFQFYSRGVYYDTGCNPENINHAVLAVGYGAQ-------KGTKHWIIKNSWGTEWGNKG 311          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: CATH_RAT (Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 3.230e-24
Identity = 64/170 (37.65%), Postives = 94/170 (55.29%), Query Frame = -2
Query:    2 ATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAI--FMQTYIGGVSCPLICGK--KWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 496
            A+G +++L+EQQLVDC  + +       ++GC GGL + A++Y++   G+  E SYPYIGK G+C+F+ EK    V N  NI + DE  +   +  + P++        FM  Y  GV     C K    +NH VL VGYG +   +       YWI+KNSWG  WG++G
Sbjct:  155 ASGKMMTLAEQQLVDCAQNFN-------NHGCQGGLPSQAFEYILYNKGIMGEDSYPYIGKNGQCKFNPEKAVAFVKNVVNITLNDEAAMVEAVALYNPVSFAFEVTEDFMM-YKSGVYSSNSCHKTPDKVNHAVLAVGYGEQNGLL-------YWIVKNSWGSNWGNNG 309          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: LMCPB_LEIME (Cysteine proteinase B OS=Leishmania mexicana GN=LMCPB PE=2 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 4.219e-24
Identity = 70/167 (41.92%), Postives = 86/167 (51.50%), Query Frame = -2
Query:    2 LLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLI--ATGGLEEESSYPYIGKRG---KCQFDSEKIA-VRVANFTNIPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 484
            L+SLSEQQLV CD   D         GC GGLM  A+ +L+    G L  E SYPY+   G   +C   SE +   ++     I   E  +AA L  +GP+AI L+A    +Y  GV     C  K LNHGVLLVGY   G         PYW+IKNSWG  WG+ G
Sbjct:  170 LVSLSEQQLVSCDDMND---------GCDGGLMLQAFDWLLQNTNGHLHTEDSYPYVSGNGYVPECSNSSELVVGAQIDGHVLIGSSEKAMAAWLAKNGPIAIALDASSFMSYKSGVLTA--CIGKQLNHGVLLVGYDMTG-------EVPYWVIKNSWGGDWGEQG 318          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 5.510e-24
Identity = 70/171 (40.94%), Postives = 90/171 (52.63%), Query Frame = -2
Query:    2 ATGNLLSLSEQQLVDCDHSCDIKEKGTCDN-GCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVD---ENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWL--NHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 496
            A G  +SLSEQQLVDC         G  +N GC+GGL + A++Y+   GGL+ E +YPY GK G C+F    I V+V +  NI +    E + A  LV    +A  +   F Q Y  GV     CG   +  NH VL VGYG +          PYW+IKNSWG  WG+ G
Sbjct:  179 AFGKGISLSEQQLVDC--------AGAFNNFGCNGGLPSQAFEYIKFNGGLDTEEAYPYTGKNGICKFSQANIGVKVISSVNITLGAEYELKYAVALVRPVSVAFEVVKGFKQ-YKSGVYASTECGDTPMDVNHAVLAVGYGVE-------NGTPYWLIKNSWGADWGEDG 333          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: CATK_MOUSE (Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 5.510e-24
Identity = 61/167 (36.53%), Postives = 91/167 (54.49%), Query Frame = -2
Query:    2 TGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPV-DENQIAAHLVHHGPLAIGLNAIF--MQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 493
            TG LL+LS Q LVDC          T + GC GG MT A++Y+   GG++ E +YPY+G+   C +++   A +   +  IPV +E  +   +   GP+++ ++A     Q Y  GV     C +  +NH VL+VGYG +  S        +WIIKNSWG+ WG+ G
Sbjct:  156 TGKLLALSPQNLVDCV---------TENYGCGGGYMTTAFQYVQQNGGIDSEDAYPYVGQDESCMYNATAKAAKCRGYREIPVGNEKALKRAVARVGPISVSIDASLASFQFYSRGVYYDENCDRDNVNHAVLVVGYGTQKGS-------KHWIIKNSWGESWGNKG 306          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: CATV_NPVEP (Viral cathepsin OS=Epiphyas postvittana nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 7.197e-24
Identity = 61/166 (36.75%), Postives = 87/166 (52.41%), Query Frame = -2
Query:    2 ATGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTN-IPVDENQIAAHLVHHGPLAIGLNAIFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 496
            A   L++LSEQQ++DCD         + D GC GGL+  A++ +I+ GG++ E+ YPY      C+ D  K  V V      I + E ++   L   GP+ + ++A  +  Y  G+     C    LNH VLLVGYG +        N PYWI+KNSWG  WG+ G
Sbjct:  152 AHDRLINLSEQQMIDCD---------SVDVGCEGGLLHTAFEAIISMGGVQIENDYPYESSNNYCRMDPTKFVVGVKQCNRYITIYEEKLKDVLRLAGPIPVAIDASDILNYEQGII--KYCANNGLNHAVLLVGYGVE-------NNVPYWILKNSWGTDWGEQG 299          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: CATS_HUMAN (Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3)

HSP 1 Score: 109.383 bits (272), Expect = 9.399e-24
Identity = 62/167 (37.13%), Postives = 94/167 (56.29%), Query Frame = -2
Query:    2 TGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLV-HHGPLAIGLNAIFMQ--TYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 493
            TG L+SLS Q LVDC      ++ G  + GC+GG MT A++Y+I   G++ ++SYPY     KCQ+DS+  A   + +T +P     +    V + GP+++G++A       Y  GV     C +  +NHGVL+VGYG        L  + YW++KNSWG  +G+ G
Sbjct:  156 TGKLVSLSAQNLVDCS----TEKYG--NKGCNGGFMTTAFQYIIDNKGIDSDASYPYKAMDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLYRSGVYYEPSCTQN-VNHGVLVVGYG-------DLNGKEYWLVKNSWGHNFGEEG 308          
BLAST of FE659117 vs. ExPASy Swiss-Prot
Match: CATL1_HUMAN (Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 9.399e-24
Identity = 59/166 (35.54%), Postives = 87/166 (52.41%), Query Frame = -2
Query:    2 TGNLLSLSEQQLVDCDHSCDIKEKGTCDNGCSGGLMTNAYKYLIATGGLEEESSYPYIGKRGKCQFDSEKIAVRVANFTNIPVDENQIAAHLVHHGPLAIGLNA--IFMQTYIGGVSCPLICGKKWLNHGVLLVGYGAKGFSILRLGNQPYWIIKNSWGKQWGDHG 493
            TG L+SLSEQ LVDC            + GC+GGLM  A++Y+   GGL+ E SYPY      C+++ +        F +IP  E  +   +   GP+++ ++A       Y  G+     C  + ++HGVL+VGY   GF      N  YW++KNSWG++WG  G
Sbjct:  155 TGRLISLSEQNLVDCSGPQG-------NEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGFVDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGY---GFESTESDNNKYWLVKNSWGEEWGMGG 310          
The following BLAST results are available for this feature:
BLAST of FE659117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 153
Match NameE-valueIdentityDescription
ALEU_HORVU1.450e-2440.94Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
TEST2_RAT2.473e-2436.75Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2[more]
CATK_CHICK3.230e-2437.72Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1[more]
CATH_RAT3.230e-2437.65Cathepsin H OS=Rattus norvegicus GN=Ctsh PE=1 SV=1[more]
LMCPB_LEIME4.219e-2441.92Cysteine proteinase B OS=Leishmania mexicana GN=LM... [more]
CYSP3_SOLLC5.510e-2440.94Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]
CATK_MOUSE5.510e-2436.53Cathepsin K OS=Mus musculus GN=Ctsk PE=2 SV=2[more]
CATV_NPVEP7.197e-2436.75Viral cathepsin OS=Epiphyas postvittana nucleopoly... [more]
CATS_HUMAN9.399e-2437.13Cathepsin S OS=Homo sapiens GN=CTSS PE=1 SV=3[more]
CATL1_HUMAN9.399e-2435.54Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2[more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC56 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659117 ID=FE659117; Name=FE659117; organism=Citrus sinensis; type=EST; length=497bp
ACCCATGGTCTCCCCATTGCTTGCCCCACGAATTCTTGATGATCCAATAC
GGCTGGTTTCCAAGCCTAAGAATTGAGAAGCCCTTGGCACCATACCCGAC
GAGCAGAACGCCGTGGTTGAGCCATTTCTTGCCGCAGATTAGCGGGCATG
AGACTCCCCCAATGTATGTTTGCATGAATATAGCGTTCAACCCAATAGCC
AGAGGACCGTGGTGGACTAAATGTGCAGCAATTTGGTTCTCATCGACAGG
AATATTGGTAAAATTTGCAACTCGAACGGCTATTTTCTCTGAATCGAATT
GGCATTTGCCACGCTTCCCAATATAAGGATATGAACTCTCCTCTTCTAGC
CCTCCAGTCGCGATCAAATATTTGTATGCATTTGTCATGAGGCCTCCAGA
ACAACCATTGTCACAAGTACCCTTCTCCTTTATATCACACGAGTGATCAC
AATCTACAAGCTGCTGCTCGCTAAGACTGAGAAGATTCCCAGTCGCA
back to top