FE659103

Overview
NameFE659103
Unique NameFE659103
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length230
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_RHIL3 (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=pckA PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.544e-22
Identity = 44/75 (58.67%), Postives = 55/75 (73.33%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            HF+SGYTA VAGTE G+ EP ATFS CFGA F+  HP +Y  +L E + +HG   WLVNTGW+GG+YG G R+ +
Sbjct:  370 HFLSGYTAKVAGTEKGVVEPEATFSTCFGAPFMPRHPAEYGNLLKELIGRHGVQCWLVNTGWTGGAYGTGKRMPI 444          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_RHIE6 (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobium etli (strain CIAT 652) GN=pckA PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.544e-22
Identity = 43/75 (57.33%), Postives = 55/75 (73.33%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            HF+SGYTA VAGTE G+ EP ATFS CFGA F+  HP +Y  +L + + +HG   WLVNTGW+GG+YG G R+ +
Sbjct:  370 HFLSGYTAKVAGTEKGVVEPEATFSTCFGAPFMPRHPAEYGNLLKDLISRHGVNCWLVNTGWTGGAYGTGKRMPI 444          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_GEOSM (Phosphoenolpyruvate carboxykinase [ATP] OS=Geobacter sp. (strain M21) GN=pckA PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 9.544e-22
Identity = 46/75 (61.33%), Postives = 56/75 (74.67%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            HF+SGYTA VAGTE G+ EP ATFSACFGA F+ L P+ YA +L +K+  H  + WLVNTGWSGG  G G R+K+
Sbjct:  371 HFLSGYTAKVAGTEAGVTEPQATFSACFGAPFMALRPSLYADLLGKKIASHKVSCWLVNTGWSGGGPGIGGRMKI 445          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_RHIME (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobium meliloti GN=pckA PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.246e-21
Identity = 43/75 (57.33%), Postives = 58/75 (77.33%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            HF+SGYTA VAGTE G+ EP ATFS CFGA F+  HP++Y  +L + + ++G T WLVNTGW+GG++G GSR+ +
Sbjct:  370 HFLSGYTAKVAGTEKGVTEPEATFSTCFGAPFMPRHPSEYGNLLKDLIARNGVTCWLVNTGWTGGAFGTGSRMPI 444          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_RHOS4 (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=pckA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.628e-21
Identity = 44/75 (58.67%), Postives = 55/75 (73.33%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            HF+SG+T+ VAGTE G+ EP  TFS CFGA F+   P  Y  +L EK+ KHGAT WLVNTGW+GG+YG G R+ +
Sbjct:  372 HFLSGFTSKVAGTERGVTEPQPTFSTCFGAPFMPRRPEVYGKLLQEKIAKHGATCWLVNTGWTGGAYGTGKRMPI 446          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_RHOS1 (Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=pckA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.628e-21
Identity = 44/75 (58.67%), Postives = 55/75 (73.33%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            HF+SG+T+ VAGTE G+ EP  TFS CFGA F+   P  Y  +L EK+ KHGAT WLVNTGW+GG+YG G R+ +
Sbjct:  372 HFLSGFTSKVAGTERGVTEPQPTFSTCFGAPFMPRRPEVYGKLLQEKIAKHGATCWLVNTGWTGGAYGTGKRMPI 446          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_ERWT9 (Phosphoenolpyruvate carboxykinase [ATP] OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=pckA PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 1.628e-21
Identity = 47/75 (62.67%), Postives = 57/75 (76.00%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            HF+SG+TA +AGTE G+ EPT TFSACFGAAF+ LHPT+YA +L ++MQ  GA  WLVNTGW+G     G RI L
Sbjct:  381 HFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLTLHPTQYAEVLVKRMQAAGAEAWLVNTGWNGS----GKRISL 451          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_PARL1 (Phosphoenolpyruvate carboxykinase [ATP] OS=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) GN=pckA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.777e-21
Identity = 43/75 (57.33%), Postives = 56/75 (74.67%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            HF+SGYTA VAGTE G+ EP ATFS CFGA F+  HPT+Y  +L + + +H  + WLVNTGW+GG YG G+R+ +
Sbjct:  371 HFLSGYTAKVAGTEKGVTEPEATFSTCFGAPFMSRHPTEYGNLLRDLIAQHKVSCWLVNTGWTGGVYGTGNRMPI 445          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_OCEIH (Phosphoenolpyruvate carboxykinase [ATP] OS=Oceanobacillus iheyensis GN=pckA PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.777e-21
Identity = 45/75 (60.00%), Postives = 57/75 (76.00%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            HF+SGYT+ +AGTE G+ EP ATFSACFG+ F+ L P+KYA ML +K+       +L+NTGW+GGSYG G RIKL
Sbjct:  365 HFLSGYTSKLAGTERGVTEPLATFSACFGSPFLPLAPSKYAEMLGKKIDMFDTNVFLINTGWTGGSYGVGDRIKL 439          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_NEUCR (Phosphoenolpyruvate carboxykinase [ATP] OS=Neurospora crassa GN=pck-1 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 2.777e-21
Identity = 43/72 (59.72%), Postives = 53/72 (73.61%), Query Frame = -2
Query:   14 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSR 229
            HFISGYT+ +AGTEDGI EP ATFS+CF   F+ LHP +YA MLAEK++ H A  WL+NTGW G  +  G +
Sbjct:  398 HFISGYTSKMAGTEDGILEPQATFSSCFAQPFLALHPMRYAKMLAEKIENHNANAWLLNTGWVGAGFAQGGK 469          
The following BLAST results are available for this feature:
BLAST of FE659103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_RHIL39.544e-2258.67Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobi... [more]
PCKA_RHIE69.544e-2257.33Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobi... [more]
PCKA_GEOSM9.544e-2261.33Phosphoenolpyruvate carboxykinase [ATP] OS=Geobact... [more]
PCKA_RHIME1.246e-2157.33Phosphoenolpyruvate carboxykinase [ATP] OS=Rhizobi... [more]
PCKA_RHOS41.628e-2158.67Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodoba... [more]
PCKA_RHOS11.628e-2158.67Phosphoenolpyruvate carboxykinase [ATP] OS=Rhodoba... [more]
PCKA_ERWT91.628e-2162.67Phosphoenolpyruvate carboxykinase [ATP] OS=Erwinia... [more]
PCKA_PARL12.777e-2157.33Phosphoenolpyruvate carboxykinase [ATP] OS=Parviba... [more]
PCKA_OCEIH2.777e-2160.00Phosphoenolpyruvate carboxykinase [ATP] OS=Oceanob... [more]
PCKA_NEUCR2.777e-2159.72Phosphoenolpyruvate carboxykinase [ATP] OS=Neurosp... [more]

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Properties
Property NameValue
Genbank descriptionC42 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659103 ID=FE659103; Name=FE659103; organism=Citrus sinensis; type=EST; length=230bp
ACGGTAACTTGATGCGGCTGCCACAACCATAGCTTCCACCTGACCATCCA
GTGTTGACGAGCCATCCTGTAGCACCATGCTTCTGCATCTTCTCAGCCAG
CATTGCTGCATACTTGGTAGGATGCAGCATGATAAATGCTGCACCAAAGC
AAGCTGAAAATGTTGCCGTTGGCTCCTTAATACCATCCTCTGTTCCAGCT
ACCAAAGCAGTGTAGCCACTGATGAAATGG
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