FE659103

Overview
NameFE659103
Unique NameFE659103
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length230
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_THETN (Phosphoenolpyruvate carboxykinase [ATP] OS=Thermoanaerobacter tengcongensis GN=pckA PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.800e-20
Identity = 46/75 (61.33%), Postives = 55/75 (73.33%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            +F+SGYT+ +AGTE GI EP ATFS CFGA F+ L P  YA ML EK++K+    +LVNTGWSGG YG G RI L
Sbjct:  361 YFLSGYTSKLAGTERGITEPQATFSTCFGAPFLPLPPMVYAKMLGEKIEKYDTKVFLVNTGWSGGPYGIGKRINL 435          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_PECCP (Phosphoenolpyruvate carboxykinase [ATP] OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=pckA PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.800e-20
Identity = 45/75 (60.00%), Postives = 58/75 (77.33%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            HF+SG+TA +AGTE G+ EPT TFSACFGAAF+MLHPT+YA +L ++M+  GA  +LVNTGW+G     G RI +
Sbjct:  381 HFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLMLHPTQYAEVLVKRMKAAGAQAYLVNTGWNGS----GKRISI 451          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_ENTS8 (Phosphoenolpyruvate carboxykinase [ATP] OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=pckA PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.800e-20
Identity = 45/75 (60.00%), Postives = 58/75 (77.33%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            HF+SG+TA +AGTE G+ EPT TFSACFGAAF+MLHPT+Y+ +L ++MQ  GA  +LVNTGW+    G G RI +
Sbjct:  381 HFLSGFTAKLAGTERGVTEPTPTFSACFGAAFLMLHPTQYSEVLVKRMQAAGAQAYLVNTGWN----GTGKRISI 451          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_BACSK (Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillus clausii (strain KSM-K16) GN=pckA PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.800e-20
Identity = 44/75 (58.67%), Postives = 56/75 (74.67%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            HF+SGYT+ +AGTE GI +P ATFS CFGA F+   P +YA ML +K++      +LVNTGW+GGSYG G+RIKL
Sbjct:  366 HFLSGYTSKLAGTERGITQPEATFSTCFGAPFLPRKPEEYATMLGDKLENDDVQVFLVNTGWTGGSYGTGTRIKL 440          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_VIBPA (Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio parahaemolyticus GN=pckA PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.351e-20
Identity = 46/75 (61.33%), Postives = 57/75 (76.00%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            HF+SG+TA +AGTE GI EPT TFSACFGAAF+ LHPTKYA +L ++M+  GA  +LVNTGW+    G G RI +
Sbjct:  383 HFLSGFTAKLAGTERGITEPTPTFSACFGAAFLTLHPTKYAEVLVKRMEAAGAEAYLVNTGWN----GTGKRISI 453          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_LYSSC (Phosphoenolpyruvate carboxykinase [ATP] OS=Lysinibacillus sphaericus (strain C3-41) GN=pckA PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.351e-20
Identity = 43/75 (57.33%), Postives = 56/75 (74.67%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            HF+SG+T+ +AGTE G+ EP   FS CFG+ F+ L  T YA ML +K+ +HGA  +LVNTGW+GG YG GSR+KL
Sbjct:  367 HFLSGFTSKLAGTERGVTEPEPVFSTCFGSPFLPLPATVYAEMLGQKIDEHGAQVYLVNTGWTGGEYGTGSRMKL 441          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_EUBE2 (Phosphoenolpyruvate carboxykinase [ATP] OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=pckA PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.351e-20
Identity = 47/75 (62.67%), Postives = 57/75 (76.00%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            +F+SG+TA +AGTE GI EPT TFSACFG AF+ LHPTKYAA L +KM+K GA  +LVNTGW+    G G RI +
Sbjct:  376 YFLSGFTAKLAGTERGITEPTPTFSACFGQAFLELHPTKYAAELVKKMEKSGAKAYLVNTGWN----GTGKRISI 446          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_DEIGD (Phosphoenolpyruvate carboxykinase [ATP] OS=Deinococcus geothermalis (strain DSM 11300) GN=pckA PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.351e-20
Identity = 42/74 (56.76%), Postives = 55/74 (74.32%), Query Frame = -2
Query:    5 FISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 226
            FISG+TA + GTE G+ EP  TFS CFGA F+  HP +YA +LA+K+++ GA  WLVNTGW+GG YG G R+ +
Sbjct:  366 FISGFTAKIPGTEQGVTEPQPTFSTCFGAPFMPRHPGEYARLLAQKVRESGANVWLVNTGWTGGQYGEGQRMSI 439          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA2_MOOTA (Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Moorella thermoacetica (strain ATCC 39073) GN=pckA2 PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.351e-20
Identity = 44/76 (57.89%), Postives = 56/76 (73.68%), Query Frame = -2
Query:    2 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKLP 229
            HF+SGYT+ +AGTE GI +P ATFS CFGA F+   P  YA +L E++ KHGA+ +LVNTGW+GG  G G R+ LP
Sbjct:  365 HFLSGYTSKLAGTERGITDPQATFSTCFGAPFLPRSPRVYADLLGERIAKHGASVYLVNTGWTGGPSGIGRRMSLP 440          
BLAST of FE659103 vs. ExPASy Swiss-Prot
Match: PCKA_SHISS (Phosphoenolpyruvate carboxykinase [ATP] OS=Shigella sonnei (strain Ss046) GN=pckA PE=3 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 3.070e-20
Identity = 46/75 (61.33%), Postives = 57/75 (76.00%), Query Frame = -2
Query:    5 HFISGYTALVAGTEDGIKEPTATFSACFGAAFIMLHPTKYAAMLAEKMQKHGATGWLVNTGWSGGSYGCGSRIKL 229
            HF+SG+TA +AGTE GI EPT TFSACFGAAF+ LHPT+YA +L ++MQ  GA  +LVNTGW+    G G RI +
Sbjct:  382 HFLSGFTAKLAGTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWN----GTGKRISI 452          
The following BLAST results are available for this feature:
BLAST of FE659103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 284
Match NameE-valueIdentityDescription
PCKA_THETN1.800e-2061.33Phosphoenolpyruvate carboxykinase [ATP] OS=Thermoa... [more]
PCKA_PECCP1.800e-2060.00Phosphoenolpyruvate carboxykinase [ATP] OS=Pectoba... [more]
PCKA_ENTS81.800e-2060.00Phosphoenolpyruvate carboxykinase [ATP] OS=Enterob... [more]
PCKA_BACSK1.800e-2058.67Phosphoenolpyruvate carboxykinase [ATP] OS=Bacillu... [more]
PCKA_VIBPA2.351e-2061.33Phosphoenolpyruvate carboxykinase [ATP] OS=Vibrio ... [more]
PCKA_LYSSC2.351e-2057.33Phosphoenolpyruvate carboxykinase [ATP] OS=Lysinib... [more]
PCKA_EUBE22.351e-2062.67Phosphoenolpyruvate carboxykinase [ATP] OS=Eubacte... [more]
PCKA_DEIGD2.351e-2056.76Phosphoenolpyruvate carboxykinase [ATP] OS=Deinoco... [more]
PCKA2_MOOTA2.351e-2057.89Phosphoenolpyruvate carboxykinase [ATP] 2 OS=Moore... [more]
PCKA_SHISS3.070e-2061.33Phosphoenolpyruvate carboxykinase [ATP] OS=Shigell... [more]

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Properties
Property NameValue
Genbank descriptionC42 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659103 ID=FE659103; Name=FE659103; organism=Citrus sinensis; type=EST; length=230bp
ACGGTAACTTGATGCGGCTGCCACAACCATAGCTTCCACCTGACCATCCA
GTGTTGACGAGCCATCCTGTAGCACCATGCTTCTGCATCTTCTCAGCCAG
CATTGCTGCATACTTGGTAGGATGCAGCATGATAAATGCTGCACCAAAGC
AAGCTGAAAATGTTGCCGTTGGCTCCTTAATACCATCCTCTGTTCCAGCT
ACCAAAGCAGTGTAGCCACTGATGAAATGG
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