EY720921

Overview
NameEY720921
Unique NameEY720921
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_BACFN (ATP synthase subunit beta OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=atpD PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.067e-29
Identity = 72/142 (50.70%), Postives = 93/142 (65.49%), Query Frame = 1
Query:  145 IGQVCQVIGAVVDVRF-----DEGLPPILTALEVVDHS-VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            IG + QVIG VVDV F     D  LP I  ALE+  H+  +L++EV QH+GE  VRT+AMD T+GL RG +V  TG PIT+PVG    GR+MNVVG+ ID   +L  +    IHR+ P F +  T  ++LFTGI+V+DLL P
Sbjct:    5 IGHISQVIGPVVDVYFEGTESDLILPSIHDALEIKRHNGKKLIVEVQQHIGENTVRTVAMDSTDGLQRGMKVFPTGGPITMPVGEQIKGRLMNVVGDSIDGMKELNRDGAYSIHRDPPKFEDLTTVQEVLFTGIKVIDLLEP 146          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_BACA2 (ATP synthase subunit beta OS=Bacillus amyloliquefaciens (strain FZB42) GN=atpD PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.067e-29
Identity = 74/144 (51.39%), Postives = 97/144 (67.36%), Query Frame = 1
Query:  148 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS-------VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYL-PIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            G+V QV+G VVDVRF++G LP I  A++V   +       + L LEVA H+G+  VRTIAM  T+G+ RG   ++TG+PI+VPVG VTLGR+ NV+G+ ID    L  +    PIHR  P+F E  TE +IL TGI+VVDLLAP
Sbjct:    4 GRVSQVLGPVVDVRFEDGHLPAIYNAIKVSQPATGENEVGIDLTLEVALHLGDDTVRTIAMASTDGIQRGMEAVDTGAPISVPVGDVTLGRVFNVLGDKIDLNEPLPADAQKDPIHRSAPSFDELSTEVEILETGIKVVDLLAP 147          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_STAAW (ATP synthase subunit beta OS=Staphylococcus aureus (strain MW2) GN=atpD PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.394e-29
Identity = 74/142 (52.11%), Postives = 96/142 (67.61%), Query Frame = 1
Query:  145 IGQVCQVIGAVVDVRFDEGLPPILTALEVVD-----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLG-TEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            IG+V QV+G V+DVRF+    P +    V+D      +++L LEVA  +G+ VVRTIAMD T+G+ RG  V +TG  I+VPVG  TLGR+ NV+GE ID K ++  +    PIHR+ PAF E  TE QIL TGI+VVDLLAP
Sbjct:    3 IGRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDSTDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAP 144          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_STAAT (ATP synthase subunit beta OS=Staphylococcus aureus (strain USA300 / TCH1516) GN=atpD PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.394e-29
Identity = 74/142 (52.11%), Postives = 96/142 (67.61%), Query Frame = 1
Query:  145 IGQVCQVIGAVVDVRFDEGLPPILTALEVVD-----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLG-TEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            IG+V QV+G V+DVRF+    P +    V+D      +++L LEVA  +G+ VVRTIAMD T+G+ RG  V +TG  I+VPVG  TLGR+ NV+GE ID K ++  +    PIHR+ PAF E  TE QIL TGI+VVDLLAP
Sbjct:    3 IGRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDSTDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAP 144          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_STAAS (ATP synthase subunit beta OS=Staphylococcus aureus (strain MSSA476) GN=atpD PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.394e-29
Identity = 74/142 (52.11%), Postives = 96/142 (67.61%), Query Frame = 1
Query:  145 IGQVCQVIGAVVDVRFDEGLPPILTALEVVD-----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLG-TEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            IG+V QV+G V+DVRF+    P +    V+D      +++L LEVA  +G+ VVRTIAMD T+G+ RG  V +TG  I+VPVG  TLGR+ NV+GE ID K ++  +    PIHR+ PAF E  TE QIL TGI+VVDLLAP
Sbjct:    3 IGRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDSTDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAP 144          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_STAAR (ATP synthase subunit beta OS=Staphylococcus aureus (strain MRSA252) GN=atpD PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.394e-29
Identity = 74/142 (52.11%), Postives = 96/142 (67.61%), Query Frame = 1
Query:  145 IGQVCQVIGAVVDVRFDEGLPPILTALEVVD-----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLG-TEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            IG+V QV+G V+DVRF+    P +    V+D      +++L LEVA  +G+ VVRTIAMD T+G+ RG  V +TG  I+VPVG  TLGR+ NV+GE ID K ++  +    PIHR+ PAF E  TE QIL TGI+VVDLLAP
Sbjct:    3 IGRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDSTDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAP 144          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_STAAN (ATP synthase subunit beta OS=Staphylococcus aureus (strain N315) GN=atpD PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.394e-29
Identity = 74/142 (52.11%), Postives = 96/142 (67.61%), Query Frame = 1
Query:  145 IGQVCQVIGAVVDVRFDEGLPPILTALEVVD-----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLG-TEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            IG+V QV+G V+DVRF+    P +    V+D      +++L LEVA  +G+ VVRTIAMD T+G+ RG  V +TG  I+VPVG  TLGR+ NV+GE ID K ++  +    PIHR+ PAF E  TE QIL TGI+VVDLLAP
Sbjct:    3 IGRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDSTDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAP 144          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_STAAM (ATP synthase subunit beta OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=atpD PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.394e-29
Identity = 74/142 (52.11%), Postives = 96/142 (67.61%), Query Frame = 1
Query:  145 IGQVCQVIGAVVDVRFDEGLPPILTALEVVD-----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLG-TEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            IG+V QV+G V+DVRF+    P +    V+D      +++L LEVA  +G+ VVRTIAMD T+G+ RG  V +TG  I+VPVG  TLGR+ NV+GE ID K ++  +    PIHR+ PAF E  TE QIL TGI+VVDLLAP
Sbjct:    3 IGRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDSTDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAP 144          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_STAAE (ATP synthase subunit beta OS=Staphylococcus aureus (strain Newman) GN=atpD PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.394e-29
Identity = 74/142 (52.11%), Postives = 96/142 (67.61%), Query Frame = 1
Query:  145 IGQVCQVIGAVVDVRFDEGLPPILTALEVVD-----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLG-TEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            IG+V QV+G V+DVRF+    P +    V+D      +++L LEVA  +G+ VVRTIAMD T+G+ RG  V +TG  I+VPVG  TLGR+ NV+GE ID K ++  +    PIHR+ PAF E  TE QIL TGI+VVDLLAP
Sbjct:    3 IGRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDSTDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAP 144          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_STAAC (ATP synthase subunit beta OS=Staphylococcus aureus (strain COL) GN=atpD PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.394e-29
Identity = 74/142 (52.11%), Postives = 96/142 (67.61%), Query Frame = 1
Query:  145 IGQVCQVIGAVVDVRFDEGLPPILTALEVVD-----HSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLG-TEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            IG+V QV+G V+DVRF+    P +    V+D      +++L LEVA  +G+ VVRTIAMD T+G+ RG  V +TG  I+VPVG  TLGR+ NV+GE ID K ++  +    PIHR+ PAF E  TE QIL TGI+VVDLLAP
Sbjct:    3 IGRVTQVMGPVIDVRFEHNEVPKINNALVIDVPKEEGTIQLTLEVALQLGDDVVRTIAMDSTDGVQRGMDVKDTGKEISVPVGDETLGRVFNVLGETIDLKEEISDSVRRDPIHRQAPAFDELSTEVQILETGIKVVDLLAP 144          
The following BLAST results are available for this feature:
BLAST of EY720921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPB_BACFN1.067e-2950.70ATP synthase subunit beta OS=Bacteroides fragilis ... [more]
ATPB_BACA21.067e-2951.39ATP synthase subunit beta OS=Bacillus amyloliquefa... [more]
ATPB_STAAW1.394e-2952.11ATP synthase subunit beta OS=Staphylococcus aureus... [more]
ATPB_STAAT1.394e-2952.11ATP synthase subunit beta OS=Staphylococcus aureus... [more]
ATPB_STAAS1.394e-2952.11ATP synthase subunit beta OS=Staphylococcus aureus... [more]
ATPB_STAAR1.394e-2952.11ATP synthase subunit beta OS=Staphylococcus aureus... [more]
ATPB_STAAN1.394e-2952.11ATP synthase subunit beta OS=Staphylococcus aureus... [more]
ATPB_STAAM1.394e-2952.11ATP synthase subunit beta OS=Staphylococcus aureus... [more]
ATPB_STAAE1.394e-2952.11ATP synthase subunit beta OS=Staphylococcus aureus... [more]
ATPB_STAAC1.394e-2952.11ATP synthase subunit beta OS=Staphylococcus aureus... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-016-A11-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720921 ID=EY720921; Name=EY720921; organism=Citrus sinensis; type=EST; length=822bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTACGCGACCTCAGC
AGCCGCCACTGCCCCACCGGCACAGACTCCGAAGTCGGATGTAAAGAAAG
GCGGCGGTGGTAAAATCACCGATGAGTTTACTGGAAAGGGCGCGATCGGT
CAGGTTTGTCAGGTCATCGGTGCCGTCGTTGATGTCAGATTTGACGAGGG
GTTGCCTCCGATTTTGACCGCGCTTGAAGTGGTAGATCACTCCGTTCGGT
TAGTGCTTGAGGTGGCTCAGCACATGGGTGAGGGTGTTGTTAGGACTATT
GCTATGGATGGAACTGAAGGGTTGGTTCGTGGCCAGCGCGTGCTCAATAC
TGGCTCTCCAATCACTGTACCTGTGGGGAGAGTTACTCTGGGTCGTATTA
TGAATGTCGTTGGAGAGCCTATTGATGAGAAAGGCGATCTCGGAACTGAG
CATTACTTGCCCATCCACAGAGAGGTTCCGGCATTCGTTGAGCAGGGAAC
TGAAGCACAGATCCTATTCACGGGCATCGAGGTTGTTGATCTCCTTGCTC
CATAACAAAGAGGACGGAGACTGGGGCCTGTCGGTGGGGCGGGGGGTGGA
GAGAGTGTGCGGGTGATGGAAAGTATCGCCCAGTGTTGGAAAGGCTCTGT
GCGGTTTGTGGAGTTGAGGATGGTGGTTGGAAGGCGTATCCGAGAGGCTG
TCGCTTCTTTGCTCGCGGTCATCGTCGCTTGCGGGGCGCTCGCGTAGAGG
GAGAGGGTGGGGTGGGTTGATTCCACGTGTTTGGGGGCTGAGAGTGTGGA
TGTGGGGGGGGTTGTGGGGGGG
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