EY720921

Overview
NameEY720921
Unique NameEY720921
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_JANSC (ATP synthase subunit beta OS=Jannaschia sp. (strain CCS1) GN=atpD PE=3 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 4.936e-43
Identity = 88/137 (64.23%), Postives = 107/137 (78.10%), Query Frame = 1
Query:  142 AIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            A+G++ QVIGAVVDV+F++ LP IL ALE  +   RLVLEVAQH+GEG VRTIAMD +EGLVRGQ V +T  PITVPVG  TLGRI+NVVGEP+DE G +  E    IH++ P F +Q TEA++L TGI+VVDLLAP
Sbjct:    4 AVGKITQVIGAVVDVQFNDHLPEILNALETENDGKRLVLEVAQHLGEGTVRTIAMDSSEGLVRGQEVTDTDGPITVPVGPGTLGRILNVVGEPVDEGGPVDAEERRGIHQDAPEFADQSTEAEVLVTGIKVVDLLAP 140          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_RHOPS (ATP synthase subunit beta OS=Rhodopseudomonas palustris (strain BisB5) GN=atpD PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 6.446e-43
Identity = 89/135 (65.93%), Postives = 105/135 (77.78%), Query Frame = 1
Query:  148 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            G++ QVIGAVVDV+F+  LP IL A+E  +   RLVLEVAQH+GE  VRTIAMD TEGLVRGQ V +TGSPI VPVG  TLGRIMNV+GEP+DE+G +  E   PIH E P + +Q TEA+IL TGI+VVDLLAP
Sbjct:    9 GRITQVIGAVVDVQFEGHLPAILNAIETKNGDNRLVLEVAQHLGESTVRTIAMDTTEGLVRGQEVTDTGSPIMVPVGIGTLGRIMNVIGEPVDEQGPVANEGLRPIHAEAPLYTDQSTEAEILVTGIKVVDLLAP 143          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_RHOPA (ATP synthase subunit beta OS=Rhodopseudomonas palustris GN=atpD PE=3 SV=1)

HSP 1 Score: 174.481 bits (441), Expect = 6.446e-43
Identity = 88/135 (65.19%), Postives = 108/135 (80.00%), Query Frame = 1
Query:  148 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            G++ QVIGAVVDV+F+  LP IL A+E  +   RLVLEVAQH+GE  VRTIAMD TEGLVRGQ V +TG+PI+VPVG  TLGRIMNV+GEP+DE+G + +E    IH+E PA+ +Q TEA+IL TGI+VVDLLAP
Sbjct:    9 GRITQVIGAVVDVQFEGHLPAILNAIETKNGDNRLVLEVAQHLGESTVRTIAMDTTEGLVRGQEVTDTGAPISVPVGAGTLGRIMNVIGEPVDEQGPIKSEGLRAIHQEAPAYTDQSTEAEILVTGIKVVDLLAP 143          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_OLICO (ATP synthase subunit beta OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=atpD PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 8.419e-43
Identity = 89/136 (65.44%), Postives = 105/136 (77.21%), Query Frame = 1
Query:  145 IGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            +G++ QVIGAVVDV+FD  LP IL A+E  +   RLVLEVAQH+GE  VR IAMD TEGLVRGQ V +TG+PI VPVG  TLGRIMNVVGEP+DE G +  +    IH+E PA+ EQ TEA+IL TGI+VVDLLAP
Sbjct:    8 VGRITQVIGAVVDVQFDGYLPAILNAIETTNQGHRLVLEVAQHLGESTVRAIAMDTTEGLVRGQEVTDTGAPIKVPVGEGTLGRIMNVVGEPVDEGGPVKADGTRAIHQEAPAYTEQSTEAEILVTGIKVVDLLAP 143          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_RHOPB (ATP synthase subunit beta OS=Rhodopseudomonas palustris (strain BisB18) GN=atpD PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.100e-42
Identity = 88/135 (65.19%), Postives = 106/135 (78.52%), Query Frame = 1
Query:  148 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            G++ QVIGAVVDV+F+  LP IL A+E  + + RLVLEVAQH+GE  VRTIAMD TEGLVRGQ V +TG+PI VPVG  TLGRIMNV+GEP+DE+G +  E   PIH E P + +Q TEA+IL TGI+VVDLLAP
Sbjct:    9 GRITQVIGAVVDVQFEGHLPAILNAVETKNGNNRLVLEVAQHLGESTVRTIAMDTTEGLVRGQEVTDTGNPIMVPVGVGTLGRIMNVIGEPVDEQGPVANEGLRPIHAEAPTYTDQSTEAEILVTGIKVVDLLAP 143          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_RHOP2 (ATP synthase subunit beta OS=Rhodopseudomonas palustris (strain HaA2) GN=atpD PE=3 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 1.100e-42
Identity = 88/135 (65.19%), Postives = 105/135 (77.78%), Query Frame = 1
Query:  148 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            G++ QVIGAVVDV+F+  LP IL A+E  +   RLVLEVAQH+GE  VRTIAMD TEGLVRGQ V +TG+PI VPVG  TLGRIMNV+GEP+DE+G +  E   PIH E P + +Q TEA+IL TGI+VVDLLAP
Sbjct:    9 GRITQVIGAVVDVQFEGHLPAILNAIETKNGDNRLVLEVAQHLGESTVRTIAMDTTEGLVRGQEVTDTGNPIMVPVGVGTLGRIMNVIGEPVDEQGPVANEGLRPIHAEAPTYTDQSTEAEILVTGIKVVDLLAP 143          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_RHOS5 (ATP synthase subunit beta OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=atpD PE=3 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 1.436e-42
Identity = 88/135 (65.19%), Postives = 104/135 (77.04%), Query Frame = 1
Query:  148 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            G+V QVIGAVVDV+FD GLP IL ALE V++  RLVLEVAQH+GE  VRTIAMD TEGLVRG  V + G PI+VPVG  TLGRI+NV+GEPIDEKG +  +    IH+  P F EQ T ++IL TGI+V+DLLAP
Sbjct:    7 GKVTQVIGAVVDVQFDGGLPAILNALETVNNDKRLVLEVAQHLGENTVRTIAMDATEGLVRGAPVTDLGGPISVPVGDATLGRILNVIGEPIDEKGPVSGDSTRAIHQPAPTFAEQSTTSEILVTGIKVIDLLAP 141          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_MESSB (ATP synthase subunit beta OS=Mesorhizobium sp. (strain BNC1) GN=atpD PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.876e-42
Identity = 89/141 (63.12%), Postives = 105/141 (74.47%), Query Frame = 1
Query:  130 TGKGAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            T  G IG V QVIGAVVDV+F E LP IL ALE  +   RLVLEVAQH+GE  VR IAMD T+GLVRGQ V +TG+PI+VPVG   LGRI+NV+GEP+DE G +    +  IH+  P +VEQ TEAQIL TGI+V+DLLAP
Sbjct:   46 TASGKIGSVRQVIGAVVDVQFQENLPAILNALETDNQGNRLVLEVAQHLGENTVRCIAMDSTDGLVRGQEVRDTGAPISVPVGPEMLGRIINVIGEPVDEAGPITATEFRGIHQPAPEYVEQSTEAQILVTGIKVLDLLAP 186          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_BARBK (ATP synthase subunit beta OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=atpD PE=3 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.876e-42
Identity = 86/139 (61.87%), Postives = 108/139 (77.70%), Query Frame = 1
Query:  136 KGAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            KGA+G++ QVIGA+VDV+F+  LP IL ALE      RL+LEVAQH+GE  VRTIAMD T+GLVRGQ+V +TG+ I VPVG  TLGRIMNV+GEP+DE G + T     IH++ P ++EQ TE++IL TGI+VVDLLAP
Sbjct:   60 KGAVGEIKQVIGAIVDVQFEGALPNILNALETDRLGSRLILEVAQHLGENTVRTIAMDTTDGLVRGQKVFDTGTQICVPVGEATLGRIMNVIGEPVDEVGPIVTTKTRSIHQKAPEYIEQSTESEILVTGIKVVDLLAP 198          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_YEAST (ATP synthase subunit beta, mitochondrial OS=Saccharomyces cerevisiae GN=ATP2 PE=1 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 3.199e-42
Identity = 88/136 (64.71%), Postives = 109/136 (80.15%), Query Frame = 1
Query:  148 GQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            G+V  VIGA+VDV F++  LP IL ALE+     +LVLEVAQH+GE  VRTIAMDGTEGLVRG++VL+TG PI+VPVGR TLGRI+NV+GEPIDE+G + ++   PIH + P+F EQ T A+IL TGI+VVDLLAP
Sbjct:   44 GKVTAVIGAIVDVHFEQSELPAILNALEIKTPQGKLVLEVAQHLGENTVRTIAMDGTEGLVRGEKVLDTGGPISVPVGRETLGRIINVIGEPIDERGPIKSKLRKPIHADPPSFAEQSTSAEILETGIKVVDLLAP 179          
The following BLAST results are available for this feature:
BLAST of EY720921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPB_JANSC4.936e-4364.23ATP synthase subunit beta OS=Jannaschia sp. (strai... [more]
ATPB_RHOPS6.446e-4365.93ATP synthase subunit beta OS=Rhodopseudomonas palu... [more]
ATPB_RHOPA6.446e-4365.19ATP synthase subunit beta OS=Rhodopseudomonas palu... [more]
ATPB_OLICO8.419e-4365.44ATP synthase subunit beta OS=Oligotropha carboxido... [more]
ATPB_RHOPB1.100e-4265.19ATP synthase subunit beta OS=Rhodopseudomonas palu... [more]
ATPB_RHOP21.100e-4265.19ATP synthase subunit beta OS=Rhodopseudomonas palu... [more]
ATPB_RHOS51.436e-4265.19ATP synthase subunit beta OS=Rhodobacter sphaeroid... [more]
ATPB_MESSB1.876e-4263.12ATP synthase subunit beta OS=Mesorhizobium sp. (st... [more]
ATPB_BARBK1.876e-4261.87ATP synthase subunit beta OS=Bartonella bacillifor... [more]
ATPB_YEAST3.199e-4264.71ATP synthase subunit beta, mitochondrial OS=Saccha... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-016-A11-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720921 ID=EY720921; Name=EY720921; organism=Citrus sinensis; type=EST; length=822bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTACGCGACCTCAGC
AGCCGCCACTGCCCCACCGGCACAGACTCCGAAGTCGGATGTAAAGAAAG
GCGGCGGTGGTAAAATCACCGATGAGTTTACTGGAAAGGGCGCGATCGGT
CAGGTTTGTCAGGTCATCGGTGCCGTCGTTGATGTCAGATTTGACGAGGG
GTTGCCTCCGATTTTGACCGCGCTTGAAGTGGTAGATCACTCCGTTCGGT
TAGTGCTTGAGGTGGCTCAGCACATGGGTGAGGGTGTTGTTAGGACTATT
GCTATGGATGGAACTGAAGGGTTGGTTCGTGGCCAGCGCGTGCTCAATAC
TGGCTCTCCAATCACTGTACCTGTGGGGAGAGTTACTCTGGGTCGTATTA
TGAATGTCGTTGGAGAGCCTATTGATGAGAAAGGCGATCTCGGAACTGAG
CATTACTTGCCCATCCACAGAGAGGTTCCGGCATTCGTTGAGCAGGGAAC
TGAAGCACAGATCCTATTCACGGGCATCGAGGTTGTTGATCTCCTTGCTC
CATAACAAAGAGGACGGAGACTGGGGCCTGTCGGTGGGGCGGGGGGTGGA
GAGAGTGTGCGGGTGATGGAAAGTATCGCCCAGTGTTGGAAAGGCTCTGT
GCGGTTTGTGGAGTTGAGGATGGTGGTTGGAAGGCGTATCCGAGAGGCTG
TCGCTTCTTTGCTCGCGGTCATCGTCGCTTGCGGGGCGCTCGCGTAGAGG
GAGAGGGTGGGGTGGGTTGATTCCACGTGTTTGGGGGCTGAGAGTGTGGA
TGTGGGGGGGGTTGTGGGGGGG
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