EY720921

Overview
NameEY720921
Unique NameEY720921
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_XANP2 (ATP synthase subunit beta OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=atpD PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.588e-41
Identity = 87/136 (63.97%), Postives = 103/136 (75.74%), Query Frame = 1
Query:  145 IGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            +G++ QVIGAVVDV+FD  LP IL ALE  +   RLVLEVAQH+GE  VR IAMD TEGLVRG  V +TG+PI VPVG  TLGRIMNV+GEP+DE G +  E    IH+  P++ EQ TEA+IL TGI+VVDLLAP
Sbjct:    5 VGRITQVIGAVVDVQFDGHLPEILNALETTNQGNRLVLEVAQHLGESTVRCIAMDATEGLVRGLEVTDTGAPIQVPVGAGTLGRIMNVIGEPVDELGPIEAEATRGIHQPAPSYAEQATEAEILVTGIKVVDLLAP 140          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_MAGSA (ATP synthase subunit beta OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=atpD PE=3 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.588e-41
Identity = 83/136 (61.03%), Postives = 105/136 (77.21%), Query Frame = 1
Query:  145 IGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            +G + QV+GAVVDVRFD  LP IL+AL +     +LVLEVAQH+GE  VRTIAMD T+GL RG  V++TG+ I +PVG  TLGRI+NV+GEPIDE+G +G +  LPIH + P FV+Q TE +IL TGI+V+DLLAP
Sbjct:    6 VGTITQVLGAVVDVRFDGQLPAILSALHLEHQGKKLVLEVAQHLGESTVRTIAMDSTDGLTRGTEVVDTGAAIQMPVGPETLGRIINVIGEPIDERGPIGNKTTLPIHADAPEFVDQSTETEILVTGIKVIDLLAP 141          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_AZOC5 (ATP synthase subunit beta OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=atpD PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.074e-41
Identity = 87/135 (64.44%), Postives = 103/135 (76.30%), Query Frame = 1
Query:  148 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            G++ QVIGAVVDV+FD  LP IL ALE  +   RLVLEVAQH+GE  VRTIAMD TEGLVRGQ V +TG PI VPVG  TLGRIMNV+GE +DE G +  E    IH++ P++ EQ TEA++L TGI+VVDLLAP
Sbjct:    6 GRITQVIGAVVDVQFDSHLPEILNALETTNQGNRLVLEVAQHLGENTVRTIAMDSTEGLVRGQAVEDTGGPIMVPVGEATLGRIMNVIGEAVDELGPVVGEAKRAIHQQAPSYSEQSTEAEMLVTGIKVVDLLAP 140          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB2_DINSH (ATP synthase subunit beta 2 OS=Dinoroseobacter shibae (strain DFL 12) GN=atpD2 PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.074e-41
Identity = 86/137 (62.77%), Postives = 103/137 (75.18%), Query Frame = 1
Query:  142 AIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            A G+V QVIGAVVDV+F++ LP IL AL   ++  +LVLEVAQH+GE  VRTIAMD TEGLVRG  V +TG PIT+PVG  TLGRIMNV+GEPIDEKG +       IH+  P F EQ T ++IL TGI+V+DLLAP
Sbjct:    4 AKGKVTQVIGAVVDVQFEDTLPEILNALNTENNGKKLVLEVAQHLGENTVRTIAMDATEGLVRGAEVTDTGGPITIPVGNATLGRIMNVIGEPIDEKGPVEASESRAIHQPAPEFSEQSTGSEILVTGIKVIDLLAP 140          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_SPHAL (ATP synthase subunit beta OS=Sphingopyxis alaskensis GN=atpD PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 3.537e-41
Identity = 85/137 (62.04%), Postives = 106/137 (77.37%), Query Frame = 1
Query:  142 AIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            A G++ QVIGAVVDV+F   LP IL ALE  ++  RLVLEVAQH+GE  VRTIAMD T+GL RGQ V +TG+ I+VPVG  TLGRI+NV+GEPIDE+G + ++   PIH + P FV+Q TEA IL TGI+V+DL+AP
Sbjct:   39 ATGRIAQVIGAVVDVQFTGELPAILNALETDNNGNRLVLEVAQHLGENTVRTIAMDATDGLTRGQPVRDTGAQISVPVGPQTLGRILNVIGEPIDERGPVNSDMTAPIHAKAPEFVDQSTEASILVTGIKVIDLIAP 175          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_BARHE (ATP synthase subunit beta OS=Bartonella henselae GN=atpD PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.620e-41
Identity = 86/139 (61.87%), Postives = 106/139 (76.26%), Query Frame = 1
Query:  136 KGAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            + A+G + QVIGAVVDV+F+  LP IL ALE  +   RLVLEVAQH+GE  VRTIAMD T+GLVRGQ+V +TG+ I+VPVG  TLGRIMNV+GEP+D  G + T     IH+E P +VEQ T ++IL TGI+VVDLLAP
Sbjct:   54 EAAVGVIKQVIGAVVDVQFEGPLPNILNALETDNLGNRLVLEVAQHLGENTVRTIAMDTTDGLVRGQKVFDTGTQISVPVGEATLGRIMNVIGEPVDNVGPIATSKTRSIHQEAPEYVEQSTASEILVTGIKVVDLLAP 192          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_SCHPO (ATP synthase subunit beta, mitochondrial OS=Schizosaccharomyces pombe GN=atp2 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.344e-40
Identity = 88/138 (63.77%), Postives = 107/138 (77.54%), Query Frame = 1
Query:  148 GQVCQVIGAVVDVRFDEG--LPPILTALEV-VDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            G + QVIGAVVD +F++   LP IL ALEV +  + RLVLEVAQH+GE  VRTIAMDGTEGLVRG  V++TGSPI++PVG  TLGRIMNV+GEP+DE+G +    Y PIH + P+F EQ T  +IL TGI+VVDLLAP
Sbjct:   55 GSIKQVIGAVVDCQFEDADSLPSILNALEVKLPDNKRLVLEVAQHVGENTVRTIAMDGTEGLVRGTAVIDTGSPISIPVGPGTLGRIMNVIGEPVDERGPIKAVKYSPIHADAPSFEEQSTTPEILETGIKVVDLLAP 192          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_BARQU (ATP synthase subunit beta OS=Bartonella quintana GN=atpD PE=3 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.755e-40
Identity = 84/139 (60.43%), Postives = 105/139 (75.54%), Query Frame = 1
Query:  136 KGAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            KGA+G++ QVIGAVVDV+F+  LP IL ALE  +   RLVLEVAQH+GE  VRTIAMD T+GL RGQ+V +T + I VPVG  TLGRIMNV+GEP+D  G + T     IH++ P +V+Q T ++IL TGI+VVDLLAP
Sbjct:   59 KGAVGEIKQVIGAVVDVQFEGALPNILNALETENLGNRLVLEVAQHLGENTVRTIAMDTTDGLTRGQKVFDTETQICVPVGEATLGRIMNVIGEPVDNVGPIATTKTRSIHQKAPEYVDQSTASEILVTGIKVVDLLAP 197          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_GEOUR (ATP synthase subunit beta OS=Geobacter uraniireducens (strain Rf4) GN=atpD PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.293e-40
Identity = 86/142 (60.56%), Postives = 106/142 (74.65%), Query Frame = 1
Query:  145 IGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSV-----RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            IG++ QVIGAV+DV F+ G LPPI  AL V + S+      LVLEVAQH+GE  VRTIAMD T+GLVRGQ  ++TG  I+VPVGR TLGRI+NV+G+P+DE G +G E    IHRE PAFV+Q T+ +   TGI+VVDLLAP
Sbjct:    5 IGKISQVIGAVIDVEFEPGKLPPIYNALRVTNPSIDDKENNLVLEVAQHLGENSVRTIAMDSTDGLVRGQAAIDTGKQISVPVGRKTLGRILNVIGDPVDEMGPVGAEKEYGIHREAPAFVDQSTKVEAFTTGIKVVDLLAP 146          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_GEOSL (ATP synthase subunit beta OS=Geobacter sulfurreducens GN=atpD PE=3 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.994e-40
Identity = 87/141 (61.70%), Postives = 103/141 (73.05%), Query Frame = 1
Query:  148 GQVCQVIGAVVDVRFDEG-LPPILTALEVV-----DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            G++ QVIGAV+DV F+ G LPPI  AL V      D    LVLEVAQH+GE  VRTIAMD T+GLVRGQ VL+TG  I+VPVGR TLGRI+NV+GEP+DE G +  E    IHRE PAFV+Q T+ +   TGI+VVDLLAP
Sbjct:    6 GKISQVIGAVIDVEFEPGKLPPIYNALRVTNPAIDDKEYNLVLEVAQHLGENAVRTIAMDSTDGLVRGQAVLDTGKQISVPVGRKTLGRILNVIGEPVDEMGPVNAEKEYGIHREAPAFVDQSTKVEAFTTGIKVVDLLAP 146          
The following BLAST results are available for this feature:
BLAST of EY720921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPB_XANP21.588e-4163.97ATP synthase subunit beta OS=Xanthobacter autotrop... [more]
ATPB_MAGSA1.588e-4161.03ATP synthase subunit beta OS=Magnetospirillum magn... [more]
ATPB_AZOC52.074e-4164.44ATP synthase subunit beta OS=Azorhizobium caulinod... [more]
ATPB2_DINSH2.074e-4162.77ATP synthase subunit beta 2 OS=Dinoroseobacter shi... [more]
ATPB_SPHAL3.537e-4162.04ATP synthase subunit beta OS=Sphingopyxis alaskens... [more]
ATPB_BARHE4.620e-4161.87ATP synthase subunit beta OS=Bartonella henselae G... [more]
ATPB_SCHPO1.344e-4063.77ATP synthase subunit beta, mitochondrial OS=Schizo... [more]
ATPB_BARQU1.755e-4060.43ATP synthase subunit beta OS=Bartonella quintana G... [more]
ATPB_GEOUR2.293e-4060.56ATP synthase subunit beta OS=Geobacter uraniireduc... [more]
ATPB_GEOSL2.994e-4061.70ATP synthase subunit beta OS=Geobacter sulfurreduc... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-016-A11-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720921 ID=EY720921; Name=EY720921; organism=Citrus sinensis; type=EST; length=822bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTACGCGACCTCAGC
AGCCGCCACTGCCCCACCGGCACAGACTCCGAAGTCGGATGTAAAGAAAG
GCGGCGGTGGTAAAATCACCGATGAGTTTACTGGAAAGGGCGCGATCGGT
CAGGTTTGTCAGGTCATCGGTGCCGTCGTTGATGTCAGATTTGACGAGGG
GTTGCCTCCGATTTTGACCGCGCTTGAAGTGGTAGATCACTCCGTTCGGT
TAGTGCTTGAGGTGGCTCAGCACATGGGTGAGGGTGTTGTTAGGACTATT
GCTATGGATGGAACTGAAGGGTTGGTTCGTGGCCAGCGCGTGCTCAATAC
TGGCTCTCCAATCACTGTACCTGTGGGGAGAGTTACTCTGGGTCGTATTA
TGAATGTCGTTGGAGAGCCTATTGATGAGAAAGGCGATCTCGGAACTGAG
CATTACTTGCCCATCCACAGAGAGGTTCCGGCATTCGTTGAGCAGGGAAC
TGAAGCACAGATCCTATTCACGGGCATCGAGGTTGTTGATCTCCTTGCTC
CATAACAAAGAGGACGGAGACTGGGGCCTGTCGGTGGGGCGGGGGGTGGA
GAGAGTGTGCGGGTGATGGAAAGTATCGCCCAGTGTTGGAAAGGCTCTGT
GCGGTTTGTGGAGTTGAGGATGGTGGTTGGAAGGCGTATCCGAGAGGCTG
TCGCTTCTTTGCTCGCGGTCATCGTCGCTTGCGGGGCGCTCGCGTAGAGG
GAGAGGGTGGGGTGGGTTGATTCCACGTGTTTGGGGGCTGAGAGTGTGGA
TGTGGGGGGGGTTGTGGGGGGG
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