EY720921

Overview
NameEY720921
Unique NameEY720921
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_GEOBB (ATP synthase subunit beta OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=atpD PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 9.632e-39
Identity = 84/141 (59.57%), Postives = 101/141 (71.63%), Query Frame = 1
Query:  148 GQVCQVIGAVVDVRFDEG-LPPILTALEVV-----DHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            G++ QVIGAV+DV F+ G LPPI  AL V      D    LVLEVAQH+GE  VRTIAMD T+GLVRGQ+V + G  I+VPVG+ TLGRI+NV+GEP+DE G +G E    IHRE P FV Q T+ +   TGI+VVDLLAP
Sbjct:    6 GKISQVIGAVIDVEFEPGKLPPIYQALRVTNPAIDDQEFNLVLEVAQHLGENAVRTIAMDSTDGLVRGQQVKDMGKQISVPVGKKTLGRILNVIGEPVDEMGPIGNEKEYGIHREAPLFVNQSTKVEAFTTGIKVVDLLAP 146          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_MARMM (ATP synthase subunit beta OS=Maricaulis maris (strain MCS10) GN=atpD PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.660e-38
Identity = 83/135 (61.48%), Postives = 96/135 (71.11%), Query Frame = 1
Query:  148 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            G++ Q+ GAVVDV FD  LP IL ALE  +    L LEVAQH+GE  VRTIAMD TEGL RG  V +TG PI VPVG  TLGRIM+V G+PIDE GD+      PIHR  P+F EQ TEA++L TGI+VVDLL P
Sbjct:    6 GRIVQITGAVVDVEFDGTLPDILNALETTNDDKTLTLEVAQHLGENTVRTIAMDATEGLQRGTVVTDTGGPIMVPVGPGTLGRIMSVTGQPIDEAGDVPHTMKAPIHRPAPSFDEQATEAEVLPTGIKVVDLLCP 140          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_RICFE (ATP synthase subunit beta OS=Rickettsia felis GN=atpD PE=3 SV=2)

HSP 1 Score: 158.303 bits (399), Expect = 4.780e-38
Identity = 83/138 (60.14%), Postives = 100/138 (72.46%), Query Frame = 1
Query:  145 IGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            IG++ Q+I AVVDV+F     LP IL ALE  +   R+VLEVAQH+G+  VR IAMD TEGLVRG  V++TGSPI +PVG  TLGRIMNVVGEPID KGD+ + +   I++  P F  Q TE  IL TGI+VVDLLAP
Sbjct:    5 IGKITQIISAVVDVKFTNNGELPEILNALECYNDKQRIVLEVAQHIGDDTVRCIAMDSTEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNISSIYKSAPDFTNQSTERNILVTGIKVVDLLAP 142          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_RICAH (ATP synthase subunit beta OS=Rickettsia akari (strain Hartford) GN=atpD PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.780e-38
Identity = 83/138 (60.14%), Postives = 100/138 (72.46%), Query Frame = 1
Query:  145 IGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            IG++ Q+I AVVDV+F     LP IL ALE  +   R+VLEVAQH+G+  VR IAMD TEGLVRG  V++TGSPI +PVG  TLGRIMNVVGEPID KGD+ + +   I++  P F  Q TE  IL TGI+VVDLLAP
Sbjct:    5 IGKITQIISAVVDVKFTNNGELPEILNALECYNDKQRIVLEVAQHIGDDTVRCIAMDSTEGLVRGVEVMDTGSPICIPVGTETLGRIMNVVGEPIDGKGDIKSSNISAIYKSAPDFTNQSTERNILVTGIKVVDLLAP 142          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_GEOLS (ATP synthase subunit beta OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=atpD PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.780e-38
Identity = 84/142 (59.15%), Postives = 102/142 (71.83%), Query Frame = 1
Query:  145 IGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHSV-----RLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            IG++ QVIGAV+DV F+ G LP I  AL V + ++      LVLEVAQH+GE  VRTIAMD T+GL RGQ V++TG  I  PVGR TLGRIMNV+GEP+DE G +G E    IHRE PAF +Q T+ +   TGI+VVDLLAP
Sbjct:    5 IGKISQVIGAVIDVEFEPGKLPEIYHALRVTNPAIDDRENNLVLEVAQHLGENSVRTIAMDSTDGLKRGQAVIDTGKQICAPVGRKTLGRIMNVIGEPVDEMGPIGNEKEYGIHREAPAFEDQSTKVEAFTTGIKVVDLLAP 146          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_RICM5 (ATP synthase subunit beta OS=Rickettsia massiliae (strain Mtu5) GN=atpD PE=3 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 8.154e-38
Identity = 82/138 (59.42%), Postives = 100/138 (72.46%), Query Frame = 1
Query:  145 IGQVCQVIGAVVDVRFDEG--LPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            IG++ Q+I AVVDV+F     LP IL ALE  +   R+VLEVAQH+G+  VR IAMD TEGLVRG  V++TGSPI +PVG  TLGRIMNVVGEPID KGD+ + +   I++  P F  Q TE  IL TGI+V+DLLAP
Sbjct:    5 IGKITQIISAVVDVKFTNNGELPEILNALECYNDKQRIVLEVAQHIGDDTVRCIAMDSTEGLVRGVEVIDTGSPIRIPVGTETLGRIMNVVGEPIDGKGDIKSSNISSIYKPAPDFTNQSTERNILVTGIKVIDLLAP 142          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_FUSNN (ATP synthase subunit beta OS=Fusobacterium nucleatum subsp. nucleatum GN=atpD PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 8.154e-38
Identity = 76/135 (56.30%), Postives = 97/135 (71.85%), Query Frame = 1
Query:  148 GQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            G + Q+I AVVD+ F + LP I  AL+V      LVLEV QH+G  VVRT+AMD T+GL RG  V++TG PIT+PVG+  LGRI+NV+GEP+D +G L  E +LPIHRE P F +  TE +I  TGI+V+DLLAP
Sbjct:    4 GTITQIISAVVDIAFKDELPAIYNALKVKLEDKELVLEVEQHLGNNVVRTVAMDSTDGLKRGMEVIDTGKPITIPVGKAVLGRILNVLGEPVDNQGPLNAETFLPIHREAPEFDDLETETEIFETGIKVIDLLAP 138          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_ALKOO (ATP synthase subunit beta OS=Alkaliphilus oremlandii (strain OhILAs) GN=atpD PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.065e-37
Identity = 75/140 (53.57%), Postives = 102/140 (72.86%), Query Frame = 1
Query:  136 KGAIGQVCQVIGAVVDVRFD-EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            +G +G++ Q+IG V+D+RF  E LP +L A+E+     ++V+EV+QH+G+  VR +AM  T+GLVRG    +TG PITVPVGR TLGRI NV+GEP+DEKG +  E   PIHR  P+F +Q T  +IL TGI+VVDL+AP
Sbjct:    3 EGNVGKLVQIIGPVIDIRFSRENLPNLLNAIEIEGPDGKIVVEVSQHIGDDTVRCVAMKSTDGLVRGMEAKDTGGPITVPVGRATLGRIFNVIGEPVDEKGAVAAEAKAPIHRPAPSFEDQATSTEILETGIKVVDLIAP 142          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_ACICJ (ATP synthase subunit beta OS=Acidiphilium cryptum (strain JF-5) GN=atpD PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.065e-37
Identity = 82/139 (58.99%), Postives = 99/139 (71.22%), Query Frame = 1
Query:  136 KGAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            K   G++ Q++G VVDV+F+  LP IL ALE      RLVLEVAQ +GE  VR IAMD T+GL RG  V +TG  I VPVG  TLGRI+NV+GEPIDE+G + T    PIHR+ P+F EQ T A+IL TGI+VVDLLAP
Sbjct:    3 KNVTGRITQIMGPVVDVQFEGELPYILNALETRVGDRRLVLEVAQEIGERTVRCIAMDSTDGLARGDEVRDTGEAIAVPVGPETLGRILNVIGEPIDERGPIPTTRTAPIHRQAPSFDEQATSAEILVTGIKVVDLLAP 141          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_DESDG (ATP synthase subunit beta OS=Desulfovibrio desulfuricans (strain G20) GN=atpD PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.391e-37
Identity = 84/141 (59.57%), Postives = 101/141 (71.63%), Query Frame = 1
Query:  145 IGQVCQVIGAVVDVRFDEG-LPPILTALEVVDHS----VRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            IG++ QVIGAVVDV F +G LP IL AL + + +      L+ EVAQH+G+ VVRTIAMD TEGLVRG  V +TG+PI VPVG  +LGRIMNVVG P+DE GD+     LPIHR  P F EQ T  ++L TGI+VVDLL P
Sbjct:    4 IGKITQVIGAVVDVEFADGNLPNILNALVIKNPNNADCPELICEVAQHLGDNVVRTIAMDATEGLVRGMEVTDTGNPIMVPVGSASLGRIMNVVGRPVDEMGDIDAAKSLPIHRPAPEFNEQNTNVELLETGIKVVDLLIP 144          
The following BLAST results are available for this feature:
BLAST of EY720921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPB_GEOBB9.632e-3959.57ATP synthase subunit beta OS=Geobacter bemidjiensi... [more]
ATPB_MARMM3.660e-3861.48ATP synthase subunit beta OS=Maricaulis maris (str... [more]
ATPB_RICFE4.780e-3860.14ATP synthase subunit beta OS=Rickettsia felis GN=a... [more]
ATPB_RICAH4.780e-3860.14ATP synthase subunit beta OS=Rickettsia akari (str... [more]
ATPB_GEOLS4.780e-3859.15ATP synthase subunit beta OS=Geobacter lovleyi (st... [more]
ATPB_RICM58.154e-3859.42ATP synthase subunit beta OS=Rickettsia massiliae ... [more]
ATPB_FUSNN8.154e-3856.30ATP synthase subunit beta OS=Fusobacterium nucleat... [more]
ATPB_ALKOO1.065e-3753.57ATP synthase subunit beta OS=Alkaliphilus oremland... [more]
ATPB_ACICJ1.065e-3758.99ATP synthase subunit beta OS=Acidiphilium cryptum ... [more]
ATPB_DESDG1.391e-3759.57ATP synthase subunit beta OS=Desulfovibrio desulfu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-016-A11-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720921 ID=EY720921; Name=EY720921; organism=Citrus sinensis; type=EST; length=822bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTACGCGACCTCAGC
AGCCGCCACTGCCCCACCGGCACAGACTCCGAAGTCGGATGTAAAGAAAG
GCGGCGGTGGTAAAATCACCGATGAGTTTACTGGAAAGGGCGCGATCGGT
CAGGTTTGTCAGGTCATCGGTGCCGTCGTTGATGTCAGATTTGACGAGGG
GTTGCCTCCGATTTTGACCGCGCTTGAAGTGGTAGATCACTCCGTTCGGT
TAGTGCTTGAGGTGGCTCAGCACATGGGTGAGGGTGTTGTTAGGACTATT
GCTATGGATGGAACTGAAGGGTTGGTTCGTGGCCAGCGCGTGCTCAATAC
TGGCTCTCCAATCACTGTACCTGTGGGGAGAGTTACTCTGGGTCGTATTA
TGAATGTCGTTGGAGAGCCTATTGATGAGAAAGGCGATCTCGGAACTGAG
CATTACTTGCCCATCCACAGAGAGGTTCCGGCATTCGTTGAGCAGGGAAC
TGAAGCACAGATCCTATTCACGGGCATCGAGGTTGTTGATCTCCTTGCTC
CATAACAAAGAGGACGGAGACTGGGGCCTGTCGGTGGGGCGGGGGGTGGA
GAGAGTGTGCGGGTGATGGAAAGTATCGCCCAGTGTTGGAAAGGCTCTGT
GCGGTTTGTGGAGTTGAGGATGGTGGTTGGAAGGCGTATCCGAGAGGCTG
TCGCTTCTTTGCTCGCGGTCATCGTCGCTTGCGGGGCGCTCGCGTAGAGG
GAGAGGGTGGGGTGGGTTGATTCCACGTGTTTGGGGGCTGAGAGTGTGGA
TGTGGGGGGGGTTGTGGGGGGG
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