EY720916

Overview
NameEY720916
Unique NameEY720916
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720916 vs. ExPASy Swiss-Prot
Match: ARAG_ECO57 (Arabinose import ATP-binding protein araG OS=Escherichia coli O157:H7 GN=araG PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 9.340e-16
Identity = 54/147 (36.73%), Postives = 81/147 (55.10%), Query Frame = 1
Query:   37 GVARTFQNLELFSALTVRENALLGTYAHGANTASRLLRPANAEARERVEHLLERVGLADFLDTPACSLDFGRQKMLELARALAISPKLLLLDEPAAGLRNREIETLDHILTELCERDGITVLLVEHVMQLVMSISDRITVMSFGEKI 477
            GVA  +Q L L   +TV EN  LG   H     +R L   N EA  +++HL    G+    DTP   L  G+ +M+E+A+ALA + K++  DEP + L  REI+ L  ++ EL  ++G  +L V H M+ + ++SD ITV   G  +
Sbjct:   83 GVAIIYQELHLVPEMTVAENIYLGQLPHKGGIVNRSL--LNYEAGLQLKHL----GMDIDPDTPLKYLSIGQWQMVEIAKALARNAKIIAFDEPTSSLSAREIDNLFRVIREL-RKEGRVILYVSHRMEEIFALSDAITVFKDGRYV 222          
BLAST of EY720916 vs. ExPASy Swiss-Prot
Match: Y4TH_RHISN (Probable amino-acid ABC transporter ATP-binding protein y4tH OS=Rhizobium sp. (strain NGR234) GN=NGR_a01510 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.220e-15
Identity = 52/154 (33.77%), Postives = 76/154 (49.35%), Query Frame = 1
Query:   52 FQNLELFSALTVRENALLGTYAHGANTASRLLRPANAEARERVEHLLERVGLADFLDTPACSLDFGRQKMLELARALAISPKLLLLDEPAAGLRNREIETLDHILTELCERDGITVLLVEHVMQLVMSISDRITVMSFGEKIAEGTPGEVGSEP 513
            FQ   LF  +TV  N               +L  +  EAR R E LLE VGL D        L  G+Q+ + +ARALA+ PK++L DEP + L    +  + +++  L     +T+L+V H M+    ISDR+     G    EGTP ++ S+P
Sbjct:   97 FQQFNLFPHMTVLRNL--------TEAPRVVLGLSKEEARRRAEELLELVGLVDHAHKFPAQLSGGQQQRVGIARALAMRPKIMLFDEPTSALDPELVGEVLNVIRRLAAEHDLTMLMVTHEMRFAREISDRVCFFDKGRIREEGTPEQLFSQP 242          
BLAST of EY720916 vs. ExPASy Swiss-Prot
Match: METN_HAES1 (Methionine import ATP-binding protein metN OS=Haemophilus somnus (strain 129Pt) GN=metN PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.220e-15
Identity = 52/163 (31.90%), Postives = 88/163 (53.99%), Query Frame = 1
Query:   40 VARTFQNLELFSALTVRENALLGTYAHGANTASRLLRPANAEARERVEHLLERVGLADFLDTPACSLDFGRQKMLELARALAISPKLLLLDEPAAGLRNREIETLDHILTELCERDGITVLLVEHVMQLVMSISDRITVMSFGEKIAEGTPGEVGSEPGVMEA 528
            +   FQ+  L S+ TV +N  L            L +    + +++V+ LL  VGL D  D    +L  G+++ + +ARALA SPK+LL DE  + L     +++  +L E+    GIT+LL+ H M +V  I D++ V++ G+ I +G+ G++ S P  + A
Sbjct:   84 IGMIFQHFNLLSSRTVFDNVALPL---------ELEKTDKTQIKQKVDALLNLVGLYDKKDVYPANLSGGQKQRVAIARALANSPKVLLCDEATSALDPATTQSILKLLKEINRTLGITILLITHEMDVVKRICDQVAVINKGQLIEQGSVGDIFSNPKTLLA 237          
BLAST of EY720916 vs. ExPASy Swiss-Prot
Match: RBSA_HAHCH (Ribose import ATP-binding protein rbsA OS=Hahella chejuensis (strain KCTC 2396) GN=rbsA PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.593e-15
Identity = 53/161 (32.92%), Postives = 80/161 (49.69%), Query Frame = 1
Query:   19 HEMAALGVARTFQNLELFSALTVRENALLGTYAHGANTASRLLRPANAEARERVEHLLERVGLADFLDTPACSLDFGRQKMLELARALAISPKLLLLDEPAAGLRNREIETLDHILTELCERDGITVLLVEHVMQLVMSISDRITVMSFGEKIAEGTPGEV 501
            H+    GV   FQ   L   L   EN  LG     A    R       + R + E + +R+ +   LD P   L    Q+ +E+A+AL++  ++L+LDEP A L   E E L  ++ EL +  G+ ++ + H M+ +  I DRITV+  GEKI +   GEV
Sbjct:   74 HDATDAGVGVIFQEFSLIPYLNAVENIFLGRELRNALGMLR-----KKDMRAQAEKICQRLDVNIDLDAPVDHLSVAEQQFVEIAKALSLDARILVLDEPTATLTPNEAEHLFRVMREL-KAQGVGMVFISHHMEEIYEICDRITVLRDGEKIGDREVGEV 228          
BLAST of EY720916 vs. ExPASy Swiss-Prot
Match: POTA_LACPL (Spermidine/putrescine import ATP-binding protein potA OS=Lactobacillus plantarum GN=potA PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.593e-15
Identity = 53/158 (33.54%), Postives = 81/158 (51.27%), Query Frame = 1
Query:   40 VARTFQNLELFSALTVRENALLGTYAHGANTASRLLRPANAEARERVEHLLERVGLADFLDTPACSLDFGRQKMLELARALAISPKLLLLDEPAAGLRNREIETLDHILTELCERDGITVLLVEHVMQLVMSISDRITVMSFGEKIAEGTPGEVGSEP 513
            V   FQ+  LF  + V EN   G   H         +    E   RV+  L  V LAD  +     +  G+Q+ + +ARAL + PK+LLLDEP + L  +  + + + L +L +R GIT L V H  +  +++SD I VM+ GE +  G+P ++  EP
Sbjct:   82 VNTVFQDYALFPHMNVAENVAFGLKLH---------KVPKDEIETRVQKALAMVQLADLGEREISEISGGQQQRVAIARALVMQPKVLLLDEPLSALDAKLRKDMQYELRDLQQRLGITFLFVTHDQEEALAMSDEIFVMNAGEILQGGSPVDIYDEP 230          
BLAST of EY720916 vs. ExPASy Swiss-Prot
Match: METN_PHOLL (Methionine import ATP-binding protein metN OS=Photorhabdus luminescens subsp. laumondii GN=metN PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.593e-15
Identity = 55/158 (34.81%), Postives = 83/158 (52.53%), Query Frame = 1
Query:   40 VARTFQNLELFSALTVRENALLGTYAHGANTASRLLRPANAEARERVEHLLERVGLADFLDTPACSLDFGRQKMLELARALAISPKLLLLDEPAAGLRNREIETLDHILTELCERDGITVLLVEHVMQLVMSISDRITVMSFGEKIAEGTPGEVGSEP 513
            +   FQ+  L S+ TV  N  L            L     AE ++RV+ LLE VGL D  D    +L  G+++ + +ARALA SPK+LL DE  + L      ++  +L ++  R G+T+LL+ H M +V  I D++ V+S G+ I +    EV S P
Sbjct:   84 IGMIFQHFNLLSSRTVFGNIALPL---------ELDNIPKAEIKKRVDELLELVGLTDKHDAYPANLSGGQKQRVAIARALANSPKVLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDQVAVISGGQLIEQDIVSEVFSHP 232          
BLAST of EY720916 vs. ExPASy Swiss-Prot
Match: LPTB_HAEIN (Lipopolysaccharide export system ATP-binding protein lptB OS=Haemophilus influenzae GN=lptB PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.593e-15
Identity = 53/172 (30.81%), Postives = 89/172 (51.74%), Query Frame = 1
Query:   19 HEMAALGVARTFQNLELFSALTVRENALLGTYAHGANTASRLLRPANAEARERVEHLLERVGLADFLDTPACSLDFGRQKMLELARALAISPKLLLLDEPAAGLRNREIETLDHILTELCERDGITVLLVEHVMQLVMSISDRITVMSFGEKIAEGTPGEVGSEPGVMEAYL 534
            H  A  G+    Q   +F  LTV EN +            + L P   + RE+ + L+E   ++   D    +L  G ++ +E+ARALA +PK +LLDEP AG+    +  +  I+T+L  R G+ VL+ +H ++  + + +R  ++  G+ IA GTP +V ++  V   YL
Sbjct:   73 HNRAQRGIGYLPQEASIFRRLTVYENLM------AVLEIRKDLTPQ--QRREKADELIEEFNISHIRDNLGQALSGGERRRVEIARALAANPKFILLDEPFAGVDPISVSDIKKIITDLRNR-GLGVLITDHNVRETLDVCERAYIVGAGKIIATGTPEQVMNDEQVKRVYL 235          
BLAST of EY720916 vs. ExPASy Swiss-Prot
Match: FBPC_STRAW (Fe(3+) ions import ATP-binding protein fbpC OS=Streptomyces avermitilis GN=fbpC PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.593e-15
Identity = 63/170 (37.06%), Postives = 80/170 (47.06%), Query Frame = 1
Query:   16 PHEMAALGVARTFQNLELFSALTVRENALLGTYAHGANTASRLLRPANAEARERVEHLLERVGLADFLDTPACSLDFGRQKMLELARALAISPKLLLLDEPAA----GLRNREIETLDHILTELCERDGITVLLVEHVMQLVMSISDRITVMSFGEKIAEGTPGEVGSEP 513
            PH+    GV   FQ+ +LF    V  N   G   HGA+          +E   RV  LL+ VGL         SL  G Q+ + LARALA  P+LL+LDEP       LR R +  L  + TEL    G TVL V H      +++DR+ VM  G     GTP EV  +P
Sbjct:   71 PHKR---GVGLMFQDHQLFPQRDVGGNVAFGLRMHGAS---------RSEQEGRVRELLDLVGLPGAARRAVASLSGGEQQRVALARALAPRPRLLMLDEPLGQLDRSLRERLVVELRELFTEL----GTTVLAVTHDQGEAFALADRVVVMRAGRIAQSGTPLEVWRQP 224          
BLAST of EY720916 vs. ExPASy Swiss-Prot
Match: FBPC2_RHIME (Fe(3+) ions import ATP-binding protein fbpC 2 OS=Rhizobium meliloti GN=fbpC2 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.081e-15
Identity = 58/154 (37.66%), Postives = 80/154 (51.95%), Query Frame = 1
Query:   52 FQNLELFSALTVRENALLGTYAHGANTASRLLRPANAEARERVEHLLERVGLADFLDTPACSLDFGRQKMLELARALAISPKLLLLDEPAAGLRNREIETLDHILTELCERDGITVLLVEHVMQLVMSISDRITVMSFGEKIAEGTPGEVGSEP 513
            FQ+  LF  LT+ +N   G    G        RP   E   RV  LLE VGL+         L  G+Q+ + LARA+AISP LLLLDEP + L  +    L H + EL  + G+T ++V H  +  ++++DRI VM+ G     GTP E+   P
Sbjct:  111 FQSYALFPNLTIEKNIAFGLENIG--------RPRR-EIASRVSELLELVGLSSQGRKYPAQLSGGQQQRVALARAMAISPGLLLLDEPLSALDAKVRVHLRHEIKELQRKLGVTTIMVTHDQEEALAMADRIVVMNQGGIEQVGTPTEIYRHP 255          
BLAST of EY720916 vs. ExPASy Swiss-Prot
Match: CYSA_LEPIN (Sulfate/thiosulfate import ATP-binding protein cysA OS=Leptospira interrogans GN=cysA PE=3 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.081e-15
Identity = 54/159 (33.96%), Postives = 82/159 (51.57%), Query Frame = 1
Query:   37 GVARTFQNLELFSALTVRENALLGTYAHGANTASRLLRPANAEARERVEHLLERVGLADFLDTPACSLDFGRQKMLELARALAISPKLLLLDEPAAGLRNREIETLDHILTELCERDGITVLLVEHVMQLVMSISDRITVMSFGEKIAEGTPGEVGSEP 513
            GV   FQ+  LF  +T+ EN      A G     R  RP+    R++V  LL+ V L +F +     L  G+++ + LARALAI P+ LLLDEP   L  +  + L + L  L +   IT + V H  +  + +SD++ ++  G+    GTP EV + P
Sbjct:   75 GVGFVFQHYALFRHMTIFENI-----AFGLEVRKRSERPSKDTIRDKVMSLLKLVQLENFYNRYPSELSGGQRQRIALARALAIEPRFLLLDEPFGALDAKVRKELRNWLRRLHDEIHITSVFVTHDQEEALEVSDKVVILRSGKIEQVGTPDEVYNHP 228          
The following BLAST results are available for this feature:
BLAST of EY720916 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ARAG_ECO579.340e-1636.73Arabinose import ATP-binding protein araG OS=Esche... [more]
Y4TH_RHISN1.220e-1533.77Probable amino-acid ABC transporter ATP-binding pr... [more]
METN_HAES11.220e-1531.90Methionine import ATP-binding protein metN OS=Haem... [more]
RBSA_HAHCH1.593e-1532.92Ribose import ATP-binding protein rbsA OS=Hahella ... [more]
POTA_LACPL1.593e-1533.54Spermidine/putrescine import ATP-binding protein p... [more]
METN_PHOLL1.593e-1534.81Methionine import ATP-binding protein metN OS=Phot... [more]
LPTB_HAEIN1.593e-1530.81Lipopolysaccharide export system ATP-binding prote... [more]
FBPC_STRAW1.593e-1537.06Fe(3+) ions import ATP-binding protein fbpC OS=Str... [more]
FBPC2_RHIME2.081e-1537.66Fe(3+) ions import ATP-binding protein fbpC 2 OS=R... [more]
CYSA_LEPIN2.081e-1533.96Sulfate/thiosulfate import ATP-binding protein cys... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-016-A04-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720916 ID=EY720916; Name=EY720916; organism=Citrus sinensis; type=EST; length=859bp
ATCACGAAGAAGAAGCCGCACGAGATGGCCGCGCTGGGCGTGGCCCGCAC
CTTCCAGAACCTGGAACTGTTCAGCGCGCTGACGGTGCGCGAGAACGCGC
TGCTGGGCACCTATGCGCACGGCGCCAACACGGCCTCGCGCCTGCTGCGC
CCGGCCAATGCCGAGGCGCGCGAACGCGTCGAGCACCTGCTGGAACGCGT
CGGCCTGGCCGATTTCCTCGACACGCCCGCGTGCAGCCTGGACTTCGGCC
GCCAGAAGATGCTGGAACTGGCGCGCGCGCTGGCCATCTCGCCCAAGCTG
CTGTTGCTGGACGAGCCCGCCGCCGGCCTGCGCAACCGCGAGATCGAGAC
ACTCGACCACATCCTCACCGAACTGTGCGAACGCGACGGTATCACGGTGC
TGCTGGTCGAGCACGTGATGCAGCTGGTGATGTCGATCTCCGATCGCATC
ACCGTCATGTCGTTCGGCGAGAAGATCGCCGAAGGCACGCCCGGGGAGGT
GGGCAGCGAGCCGGGGGTGATGGAAGCCTATCTGGGCCAGGGGGGCCCCC
TTGGTTGAGAACGGGGTTAGATGGAGTGCTGGGCGCCGGCGAAGGGTGAT
CGGAGCGGCTGGGGTTGTGGCGGTTGAAGTGCCGCGGGCGGCGGGGTGGT
GGGGGTGTGGGCGCAGGGGTGGGGGGAGGGGGGGTGGGGGGGGGGGGGCG
GGGGGGGGGAGGGGGGGGGGGGGGGGGGCGGGGGGGCGCGGGGGGGGGGG
GCGGCGGGGGGCGGGGTATGCTGCGCGATGCAGGGTGATAGCGATAAAGG
AAGAGAGGGAGGGGAATGTCGGGCGGGAGTCGGGGCCACGGGGGGGGTGG
GGGGGGAGA
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