EY720838

Overview
NameEY720838
Unique NameEY720838
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720838 vs. ExPASy Swiss-Prot
Match: CH60_SULSY (60 kDa chaperonin OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=groL PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 7.343e-20
Identity = 55/135 (40.74%), Postives = 84/135 (62.22%), Query Frame = 3
Query:  237 AQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLAARKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSNCVFFDLLTEIGPVRRYNGTDVLIIAEDIENDLPSSLVLN 641
            ++P+T  ++I    T +AN D  IG++IA A EK   + +  +   K+  ++ L++  GM  DRGYLSPYF+TN +  E VL +PYI+I EKKV N    +LL  +  V + N   +LIIAED+E +  ++LV+N
Sbjct:  135 SKPVTGRKEIEQVATISANNDPEIGKIIADAMEKVGKDGVITVEESKSAETV-LEVTEGMQFDRGYLSPYFVTNAEKMEAVLENPYILIYEKKVGN--IRELLPVLEKVVQTN-KPLLIIAEDVEGEALATLVVN 265          

HSP 2 Score: 27.7202 bits (60), Expect = 7.343e-20
Identity = 11/22 (50.00%), Postives = 14/22 (63.64%), Query Frame = 1
Query:  661 KACVIKPPXIGESXKAXLRDIA 726
            + C +K P  GE  KA L+DIA
Sbjct:  272 RVCAVKAPGFGERRKAMLQDIA 293          
BLAST of EY720838 vs. ExPASy Swiss-Prot
Match: CH60_THEYD (60 kDa chaperonin OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=groL PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 9.551e-20
Identity = 58/151 (38.41%), Postives = 90/151 (59.60%), Query Frame = 3
Query:  189 DKGLEWQLMHLWEIYTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLAARKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSNCVFFDLLTEIGPVRRYNGTDVLIIAEDIENDLPSSLVLN 641
            DK +E  +  L +I  ++P+   ++IA  GT +AN D  IGELIA+A +K  G +  +        +  L +  GM  DRGY+SPYFIT+ +  EC+L D +++I +KK+S     DLL  +  + R  G  +LIIAED+E +  ++LV+N
Sbjct:  121 DKAVEAVVEELKKI--SKPVVDKKEIAQVGTISANNDVSIGELIAEAMDKV-GKDGVITVEEAKGMATTLDIVEGMQFDRGYISPYFITDPERLECILEDAFVLIHDKKIS--TMKDLLPILEQIARM-GRPLLIIAEDVEGEALATLVVN 265          

HSP 2 Score: 26.9498 bits (58), Expect = 9.551e-20
Identity = 11/22 (50.00%), Postives = 13/22 (59.09%), Query Frame = 1
Query:  661 KACVIKPPXIGESXKAXLRDIA 726
            + C +K P  GE  KA L DIA
Sbjct:  272 QVCAVKAPGFGERRKAMLEDIA 293          
BLAST of EY720838 vs. ExPASy Swiss-Prot
Match: CH60_JANMA (60 kDa chaperonin OS=Janthinobacterium sp. (strain Marseille) GN=groL PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.242e-19
Identity = 56/135 (41.48%), Postives = 83/135 (61.48%), Query Frame = 3
Query:  237 AQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLAARKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSNCVFFDLLTEIGPVRRYNGTDVLIIAEDIENDLPSSLVLN 641
            A+P T+ ++IA  G+ +AN D  IGE IA+A EK     +  +   K+    EL +  GM  DRGYLSPYFI N + +  +L +P+I++ +KK+SN    DLL  +  V +  G  +LIIAEDIE +  ++LV+N
Sbjct:  135 AKPCTTTKEIAQVGSISANSDASIGERIAEAMEKVGKEGVITVEDGKSLND-ELDIVEGMQFDRGYLSPYFINNPEKQTAILENPFILLCDKKISN--IRDLLPVLEQVAK-AGRPLLIIAEDIEGEALATLVVN 265          

HSP 2 Score: 27.335 bits (59), Expect = 1.242e-19
Identity = 11/22 (50.00%), Postives = 13/22 (59.09%), Query Frame = 1
Query:  661 KACVIKPPXIGESXKAXLRDIA 726
            K C +K P  G+  KA L DIA
Sbjct:  272 KTCAVKAPGFGDRRKAMLEDIA 293          
BLAST of EY720838 vs. ExPASy Swiss-Prot
Match: CH60_HERAR (60 kDa chaperonin OS=Herminiimonas arsenicoxydans GN=groL PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.100e-19
Identity = 56/135 (41.48%), Postives = 82/135 (60.74%), Query Frame = 3
Query:  237 AQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLAARKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSNCVFFDLLTEIGPVRRYNGTDVLIIAEDIENDLPSSLVLN 641
            A+P T+ ++IA  G  +AN D  IGE IA+A EK     +  +   K+    EL +  GM  DRGYLSPYFI N + +  +L +P+I++ +KK+SN    DLL  +  V +  G  +LIIAEDIE +  ++LV+N
Sbjct:  135 AKPCTTTKEIAQVGAISANSDYSIGERIAEAMEKVGKEGVITVEDGKSLND-ELDIVEGMQFDRGYLSPYFINNPEKQTAILENPFILLCDKKISN--IRDLLPVLEQVAK-AGRPLLIIAEDIEGEALATLVVN 265          

HSP 2 Score: 27.335 bits (59), Expect = 2.100e-19
Identity = 11/22 (50.00%), Postives = 13/22 (59.09%), Query Frame = 1
Query:  661 KACVIKPPXIGESXKAXLRDIA 726
            K C +K P  G+  KA L DIA
Sbjct:  272 KTCAVKAPGFGDRRKAMLEDIA 293          
BLAST of EY720838 vs. ExPASy Swiss-Prot
Match: CH60_CHLL2 (60 kDa chaperonin OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=groL PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.731e-19
Identity = 55/138 (39.86%), Postives = 84/138 (60.87%), Query Frame = 3
Query:  237 AQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLAARKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSNCVFFDLLTEIGPV---RRYNGTDVLIIAEDIENDLPSSLVLN 641
            ++ I+  ++IA  GT +AN D  IGELIA+A +K   + +  +   K   + EL++  GM  DRGYLSPYF+TN +T E  + DP I+I +KK+ N      + E+ P+      +G  +LIIAEDIE +  ++LV+N
Sbjct:  135 SRSISGKKEIAQVGTISANNDPEIGELIAEAMDKVGKDGVITVEEAKGMDT-ELKVVEGMQFDRGYLSPYFVTNPETMEAEIEDPLILIHDKKIGN------MKELLPILEKSAQSGRPLLIIAEDIEGEALATLVVN 265          

HSP 2 Score: 27.335 bits (59), Expect = 2.731e-19
Identity = 11/22 (50.00%), Postives = 13/22 (59.09%), Query Frame = 1
Query:  661 KACVIKPPXIGESXKAXLRDIA 726
            K C +K P  G+  KA L DIA
Sbjct:  272 KVCAVKAPGFGDRRKAMLEDIA 293          
BLAST of EY720838 vs. ExPASy Swiss-Prot
Match: CH60_NITSB (60 kDa chaperonin OS=Nitratiruptor sp. (strain SB155-2) GN=groL PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 3.552e-19
Identity = 60/151 (39.74%), Postives = 89/151 (58.94%), Query Frame = 3
Query:  189 DKGLEWQLMHLWEIYTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLAARKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSNCVFFDLLTEIGPVRRYNGTDVLIIAEDIENDLPSSLVLN 641
            DK  E  +  L +I  A+ +   ++IA   T +AN D  IGELIA+A EK   + +  +   K+    EL++  GM  DRGYLSPYF+T+ +  E VL + YI++ +KK+SN    DLL  +  V +     +LIIAEDIE +  ++LV+N
Sbjct:  121 DKAAEAIVAELKKI--AKEVKDKKEIAQVATISANNDPKIGELIAEAMEKVGKDGVITVEEGKSLQD-ELEVVEGMQFDRGYLSPYFVTDTEKMEAVLENAYILLYDKKISN--MKDLLPVLEKVVQTGNKPLLIIAEDIEGEALATLVVN 266          

HSP 2 Score: 25.7942 bits (55), Expect = 3.552e-19
Identity = 10/20 (50.00%), Postives = 13/20 (65.00%), Query Frame = 1
Query:  667 CVIKPPXIGESXKAXLRDIA 726
            C +K P  G+  KA L+DIA
Sbjct:  275 CAVKAPGFGDRRKAMLQDIA 294          
BLAST of EY720838 vs. ExPASy Swiss-Prot
Match: CH60_PELPB (60 kDa chaperonin OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=groL PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.552e-19
Identity = 54/138 (39.13%), Postives = 85/138 (61.59%), Query Frame = 3
Query:  237 AQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLAARKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSNCVFFDLLTEIGPV---RRYNGTDVLIIAEDIENDLPSSLVLN 641
            ++ I+  ++IA  GT +AN D VIG+LIA A +K   + +  +   K   + EL++  GM  DRGYLSPYF+TN +T +  L DP I+I +KK+SN      + E+ P+      +G  +LII+EDIE +  +++V+N
Sbjct:  135 SRSISGKKEIAQVGTISANNDPVIGDLIADAMDKVGKDGVITVEEAKGMDT-ELKVVEGMQFDRGYLSPYFVTNSETMDAELEDPLILIYDKKISN------MKELLPILEKSAQSGRPLLIISEDIEGEALATIVVN 265          

HSP 2 Score: 26.1794 bits (56), Expect = 3.552e-19
Identity = 10/22 (45.45%), Postives = 13/22 (59.09%), Query Frame = 1
Query:  661 KACVIKPPXIGESXKAXLRDIA 726
            + C +K P  G+  KA L DIA
Sbjct:  272 RVCAVKAPGFGDRRKAMLEDIA 293          
BLAST of EY720838 vs. ExPASy Swiss-Prot
Match: CH60_RHOMR (60 kDa chaperonin OS=Rhodothermus marinus GN=groL PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.338e-19
Identity = 65/152 (42.76%), Postives = 92/152 (60.53%), Query Frame = 3
Query:  189 DKGLEWQLMHLWEIYTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEK-GWGNNLHVLAARKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSNCVFFDLLTEIGPVRRYNGTDVLIIAEDIENDLPSSLVLN 641
            DK +E  +  L ++  +Q +    +IA   T +ANGD+ IG+LIA AFEK G    + V  A+ T  ++E+    GM  DRGYLSPYF+TN  T E VL D YI+I +KK+S     DLL  +  V +  G  +LIIAED+E +  ++LV+N
Sbjct:  121 DKAVEVVVAELRKM--SQEVQDKNRIAQVATISANGDKAIGQLIADAFEKVGKDGVITVEEAKGTETTLEV--VEGMQFDRGYLSPYFVTNPDTMEAVLEDAYILIHDKKIS--AMKDLLPILEKVVQ-TGRPLLIIAEDVEGEALATLVVN 265          
BLAST of EY720838 vs. ExPASy Swiss-Prot
Match: CH60_ACIBL (60 kDa chaperonin OS=Acidobacteria bacterium (strain Ellin345) GN=groL PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 4.618e-19
Identity = 56/135 (41.48%), Postives = 87/135 (64.44%), Query Frame = 3
Query:  237 AQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLAARKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSNCVFFDLLTEIGPVRRYNGTDVLIIAEDIENDLPSSLVLN 641
            ++P+T  E IA  GT +AN D  IG++IA+A +K   + +  +   KT  + +L++  GM  DRGYLSPYF+T+ +  E VL +PYI+I EKKVS+    DLL  +  + +  G  ++IIAED+E +  ++LV+N
Sbjct:  145 SKPVTG-EMIAQVGTISANNDETIGKIIAEAMKKVGKDGVITVEESKTMET-QLEVVEGMQFDRGYLSPYFVTDPERMEAVLENPYILIHEKKVSS--MKDLLPLLEQIAK-GGRPLVIIAEDVEGEALATLVVN 274          

HSP 2 Score: 23.0978 bits (48), Expect = 4.618e-19
Identity = 11/25 (44.00%), Postives = 15/25 (60.00%), Query Frame = 1
Query:  673 IKPPXIGESXKAXLRDIAQSHMGKS 747
            +K P  G+  KA L+DIA    GK+
Sbjct:  285 VKAPGFGDRRKAMLQDIAILTGGKA 309          
BLAST of EY720838 vs. ExPASy Swiss-Prot
Match: CH60_AKKM8 (60 kDa chaperonin OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=groL PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 4.619e-19
Identity = 54/137 (39.42%), Postives = 85/137 (62.04%), Query Frame = 3
Query:  237 AQPITSFEQIALFGTAAANGDRVIGELIAKAFEK-GWGNNLHVLAARKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSNCV-FFDLLTEIGPVRRYNGTDVLIIAEDIENDLPSSLVLN 641
            ++P+ S +++A   T +AN D  IG +IA+A +K G    + V  A+    ++++    GM  D+GYLSPYF+TN +T E VL +PYI+I EKK++N   F  LL ++      +G   L+IAEDIE +  ++LV+N
Sbjct:  134 SKPVDSSKEVAQVATVSANWDAEIGNIIAEAMDKVGKDGTITVEEAKGIETTLDV--VEGMQFDKGYLSPYFVTNAETMEAVLENPYILIHEKKINNLKDFLPLLEKVAK----SGRPFLVIAEDIEGEALATLVVN 264          

HSP 2 Score: 25.0238 bits (53), Expect = 4.619e-19
Identity = 11/26 (42.31%), Postives = 14/26 (53.85%), Query Frame = 1
Query:  667 CVIKPPXIGESXKAXLRDIAQSHMGK 744
            C +K P  G+  KA + DIA    GK
Sbjct:  273 CAVKAPGFGDRRKAMMEDIAILTGGK 298          
The following BLAST results are available for this feature:
BLAST of EY720838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_SULSY7.343e-2040.7460 kDa chaperonin OS=Sulfurihydrogenibium sp. (str... [more]
CH60_THEYD9.551e-2038.4160 kDa chaperonin OS=Thermodesulfovibrio yellowsto... [more]
CH60_JANMA1.242e-1941.4860 kDa chaperonin OS=Janthinobacterium sp. (strain... [more]
CH60_HERAR2.100e-1941.4860 kDa chaperonin OS=Herminiimonas arsenicoxydans ... [more]
CH60_CHLL22.731e-1939.8660 kDa chaperonin OS=Chlorobium limicola (strain D... [more]
CH60_NITSB3.552e-1939.7460 kDa chaperonin OS=Nitratiruptor sp. (strain SB1... [more]
CH60_PELPB3.552e-1939.1360 kDa chaperonin OS=Pelodictyon phaeoclathratifor... [more]
CH60_RHOMR4.338e-1942.7660 kDa chaperonin OS=Rhodothermus marinus GN=groL ... [more]
CH60_ACIBL4.618e-1941.4860 kDa chaperonin OS=Acidobacteria bacterium (stra... [more]
CH60_AKKM84.619e-1939.4260 kDa chaperonin OS=Akkermansia muciniphila (stra... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-015-A05-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720838 ID=EY720838; Name=EY720838; organism=Citrus sinensis; type=EST; length=898bp
CACGCGTCCGCAAAATCACAAACGATGTTGCGCCATGCCTCTGACCTCGC
CTCCAAAGTCAGGTTCATTTAACTCGGAGCAGACAGTATACCGCGGCGGA
AGTCACTAAAAGATTTTTTGATTGCACCAATTCTAAAGTTAAAAGGGAGA
ATTTTATATGCGGGAGGATGCGGAAGTGCCAGACCAAAGACAAGGGGCTA
GAATGGCAATTGATGCACTTGTGGGAAATTTATACAGCACAACCCATCAC
ATCATTCGAACAAATAGCCCTGTTTGGAACGGCTGCAGCAAATGGTGACA
GAGTGATTGGCGAGCTCATAGCCAAGGCTTTTGAGAAAGGTTGGGGAAAC
AATCTTCATGTTTTAGCTGCTCGGAAAACACCACCCAGTATTGAACTTCA
GTTGTATTGGGGAATGACCCTAGACAGGGGCTATTTGTCACCTTACTTCA
TCACCAATCATAAGACAAAAGAATGTGTNTTACGAGATCCTTATATCATG
ATCCTTGAGAAAAAGGTTTCGAACTGCGTCTTCTTTGACTTATTGACAGA
GATTGGACCAGTTAGAAGATATAATGGCACAGATGTACTGATTATTGCTG
AAGATATTGAAAATGATCTCCCTAGCAGTCTTGTCTTAAATGGGAGTGGC
TACAGCAACCAAGGCTTGTGTCATAAAACCTCCTGNNATTGGGGAAAGTA
NGAAGGCTANCCTTCGGGACATTGCCCAATCACATATGGGGAAGTCATGA
CANGANNAGATTTTGAATGCGTATCTCTTGGCCATGCTGAGAAGATACGG
TATCAAAGGATCANACGGTTATCCTTCTTTGTANGGCTGCATANGACAGA
AAAAGTGTTACAATGGAGATTCCAATGGAAAATTACAAGATTCCCTGA
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