EY720830

Overview
NameEY720830
Unique NameEY720830
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720830 vs. ExPASy Swiss-Prot
Match: DHE3_BACTN (Glutamate dehydrogenase OS=Bacteroides thetaiotaomicron GN=gdhA PE=3 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 3.938e-22
Identity = 62/176 (35.23%), Postives = 92/176 (52.27%), Query Frame = 1
Query:  235 SKLERSLLIPFREIKVECSIPKDDGSLATFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAAIPYGGAKGGIGCNPRELSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYSXFHGYSPAVVTGXAIDLGGSLGREAATGLG-VFFGTEAL 759
            + L   L IP R  +   +   D G++ T +G+R+QH+NA GP KGGIR+H  V+   +  LA   T+K ++  +P GG KGG   +PR  S +E+ R  + F  ++   IG   DVPA D+G   + + ++   Y           TG   + GGSL R  ATG G ++F  E L
Sbjct:   44 ANLIERLCIPDRVFQFRVTWMDDKGNIQTNMGYRVQHNNAIGPYKGGIRFHASVNLSILKFLAFEQTFKNSLTTLPMGGGKGGSDFSPRGKSNAEVMRFVQAFMLELWRHIGPETDVPAGDIGVGGREVGFMFGMYKKLAHEFTGTFTGKGREFGGSLIRPEATGYGNIYFLMEML 219          
BLAST of EY720830 vs. ExPASy Swiss-Prot
Match: DHE4_HELPJ (NADP-specific glutamate dehydrogenase OS=Helicobacter pylori J99 GN=gdhA PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.717e-22
Identity = 60/181 (33.15%), Postives = 93/181 (51.38%), Query Frame = 1
Query:  241 LERSLLIPFREIKVECSIPKDDGSLATFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAAIPYGGAKGGIGCNPRELSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYSXFHGYSPAVVTGXAIDLGGSLGREAATGLGVFFGTEALLAEHGKSI 783
            LER L+ P REI        D+  +    G R++ ++A GP KGG+R+HP V+   +  L      K ++  +  GGAKGG   +P+E S  E+ R  + F  +++  IG   DVPA D+G   + + ++  +Y         V+TG  +  GGSL R+ ATG G  +  E +L E   S+
Sbjct:   47 LER-LIEPEREIFFRVCWLDDNHQIQVNRGCRVEFNSAIGPYKGGLRFHPSVNESVIKFLGFEQVLKNSLTTLAMGGAKGGSDFDPKEKSEHEIMRFCQAFMNELYRHIGATTDVPAGDIGVGEREIGYLFGQYKKLVNRFEGVLTGKGLTYGGSLCRKEATGYGCVYFAEEMLQERNSSL 226          
BLAST of EY720830 vs. ExPASy Swiss-Prot
Match: DHE4_UNKP (NADP-specific glutamate dehydrogenase OS=Unknown prokaryotic organism GN=gdhA PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.146e-21
Identity = 60/178 (33.71%), Postives = 92/178 (51.69%), Query Frame = 1
Query:  241 LERSLLIPFREIKVECSIPKDDGSLATFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAAIPYGGAKGGIGCNPRELSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYSXFHGYSPAVVTGXAIDLGGSLGREAATGLGVFFGTEALLAEHG 774
            LER L+ P R I+   S   D G +     FR+Q ++A GP KGG+R+HP V+   +  L    T+K A+  +P GG KGG   +P+  S   + R  +    +++  +G   DVPA D+G   + + ++          +  V TG  +  GGSL R  ATG G+ + T+A+L  HG
Sbjct:   51 LER-LVEPERIIQFRVSWVDDRGQVQVNRAFRVQFNSAIGPYKGGMRFHPSVNLSILKFLGFEQTFKNALTTLPMGGGKGGSDFDPKGKSQGRIMRFCQALMTELYRHLGPDTDVPAGDIGDGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLVYFTDAMLQRHG 227          
BLAST of EY720830 vs. ExPASy Swiss-Prot
Match: DHE5_YEAST (NADP-specific glutamate dehydrogenase 2 OS=Saccharomyces cerevisiae GN=GDH3 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.496e-21
Identity = 56/175 (32.00%), Postives = 96/175 (54.86%), Query Frame = 1
Query:  259 IPFREIKVECSIPKDDGSLATFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAAIPYGGAKGGIGCNPRELSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYSXFHGYSPAVVTGXAIDLGGSLGREAATGLGVFFGTEALL--AEHGK 777
            +P R I+   +   D+G      G+R+Q ++A+GP KGG+R+HP V+   +  L     +K A+  +  GG KGG+  + +  S +E+ R+   F +++   IG   DVPA D+G   + + ++   Y  +      V+TG  ++ GGSL R  ATG G+ + T+A++  A +GK
Sbjct:   39 VPERIIQFRVTWENDNGEQEVAQGYRVQFNSAKGPYKGGLRFHPSVNLSILKFLGFEQIFKNALTGLDMGGGKGGLCVDLKGKSDNEIRRICYAFMRELSRHIGKDTDVPAGDIGVGGREIGYLFGAYRSYKNSWEGVLTGKGLNWGGSLIRPEATGFGLVYYTQAMIDYATNGK 213          
BLAST of EY720830 vs. ExPASy Swiss-Prot
Match: DHE4_YEAST (NADP-specific glutamate dehydrogenase 1 OS=Saccharomyces cerevisiae GN=GDH1 PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 2.553e-21
Identity = 55/175 (31.43%), Postives = 96/175 (54.86%), Query Frame = 1
Query:  259 IPFREIKVECSIPKDDGSLATFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAAIPYGGAKGGIGCNPRELSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYSXFHGYSPAVVTGXAIDLGGSLGREAATGLGVFFGTEALL--AEHGK 777
            +P R I+   +   D G      G+R+Q+++A+GP KGG+R+HP V+   +  L     +K ++  +  GG KGG+  + +  S +E+ R+   F +++   IG   DVPA D+G   + + ++   Y  +      V+TG  ++ GGSL R  ATG G+ + T+A++  A +GK
Sbjct:   38 VPERIIQFRVTWENDKGEQEVAQGYRVQYNSAKGPYKGGLRFHPSVNLSILKFLGFEQIFKNSLTGLDMGGGKGGLCVDLKGRSNNEIRRICYAFMRELSRHIGQDTDVPAGDIGVGGREIGYLFGAYRSYKNSWEGVLTGKGLNWGGSLIRPEATGYGLVYYTQAMIDYATNGK 212          
BLAST of EY720830 vs. ExPASy Swiss-Prot
Match: DHE4_SACBA (NADP-specific glutamate dehydrogenase 1 OS=Saccharomyces bayanus GN=GDH1 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.553e-21
Identity = 55/175 (31.43%), Postives = 96/175 (54.86%), Query Frame = 1
Query:  259 IPFREIKVECSIPKDDGSLATFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAAIPYGGAKGGIGCNPRELSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYSXFHGYSPAVVTGXAIDLGGSLGREAATGLGVFFGTEALL--AEHGK 777
            +P R I+   +   D G      G+R+Q+++A+GP KGG+R+HP V+   +  L     +K ++  +  GG KGG+  + +  S +E+ R+   F +++   IG   DVPA D+G   + + ++   Y  +      V+TG  ++ GGSL R  ATG G+ + T+A++  A +GK
Sbjct:   38 VPERIIQFRVTWENDKGEQEVAQGYRVQYNSAKGPYKGGLRFHPSVNLSILKFLGFEQIFKNSLTGLDMGGGKGGLCVDLKGRSNNEIRRICYAFMRELSRHIGQDTDVPAGDIGVGGREIGYLFGAYRTYKNSWEGVLTGKGLNWGGSLIRPEATGYGLVYYTQAMIDYATNGK 212          
BLAST of EY720830 vs. ExPASy Swiss-Prot
Match: DHE4_HELPY (NADP-specific glutamate dehydrogenase OS=Helicobacter pylori GN=gdhA PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.553e-21
Identity = 59/181 (32.60%), Postives = 92/181 (50.83%), Query Frame = 1
Query:  241 LERSLLIPFREIKVECSIPKDDGSLATFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAAIPYGGAKGGIGCNPRELSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYSXFHGYSPAVVTGXAIDLGGSLGREAATGLGVFFGTEALLAEHGKSI 783
            LER L+ P REI        D+  +    G R++ ++A GP KGG+R+HP V+   +  L      K ++  +  GGAKGG   +P+  S  E+ R  + F  +++  IG   DVPA D+G   + + ++  +Y         V+TG  +  GGSL R+ ATG G  +  E +L E   S+
Sbjct:   47 LER-LIEPEREIFFRVCWLDDNNQIQVNRGCRVEFNSAIGPYKGGLRFHPSVNESVIKFLGFEQVLKNSLTTLAMGGAKGGSDFDPKGKSEHEIMRFCQAFMNELYRHIGATTDVPAGDIGVGEREIGYLFGQYKKLVNRFEGVLTGKGLTYGGSLCRKEATGYGCVYFAEEMLQERNSSL 226          
BLAST of EY720830 vs. ExPASy Swiss-Prot
Match: DHE4_GIBFU (NADP-specific glutamate dehydrogenase OS=Gibberella fujikuroi GN=GDH2 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.334e-21
Identity = 57/168 (33.93%), Postives = 86/168 (51.19%), Query Frame = 1
Query:  259 IPFREIKVECSIPKDDGSLATFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAAIPYGGAKGGIGCNPRELSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYSXFHGYSPAVVTGXAIDLGGSLGREAATGLGVFFGTEALL 762
            IP R I+       D G+L    G+R+Q + A GP KGG+R+HP V+   +  L     +K A+  +  GG KGG   +P+  S +E+ R  + F  ++   IG   DVPA D+G   + + ++   Y  F      V+TG  +  GGSL R  ATG G+ +  E +L
Sbjct:   42 IPERVIQFRVVWNDDKGNLQVNRGYRVQFNGALGPYKGGLRFHPSVNLSILKFLGFEQIFKNALTGLNMGGGKGGADFDPKGKSDAEIRRFCQAFMTELSKHIGAETDVPAGDIGVGGREIGYLFGAYRKFANRWEGVLTGKGLSWGGSLIRPEATGYGLVYYVEYML 209          
BLAST of EY720830 vs. ExPASy Swiss-Prot
Match: DHE2_BACFR (NAD-specific glutamate dehydrogenase OS=Bacteroides fragilis GN=gdhB PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 3.334e-21
Identity = 60/183 (32.79%), Postives = 90/183 (49.18%), Query Frame = 1
Query:  235 SKLERSLLIPFREIKVECSIPKDDGSLATFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAAIPYGGAKGGIGCNPRELSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYSXFHGYSPAVVTGXAIDLGGSLGREAATGLGVFFGTEALLAEHGKSI 783
            SK+   L+ P R      +   D G + T +G+R+Q +NA GP KGGIR+H  V+   +  L    T+K A+  +P GG KGG   +PR  S +E+ R  + F  ++   +G   DVPA D+G   + + ++   Y           TG  ++ GGSL R  ATG G  +    +L   G  I
Sbjct:   44 SKIIERLVEPDRIFTFRVTWVDDKGEVQTNLGYRVQFNNAIGPYKGGIRFHASVNLSILKFLGFEQTFKNALTTLPMGGGKGGSDFSPRGKSDAEIMRFCQAFMLELWRHLGPDMDVPAGDIGVGGREVGYMFGMYKKLTREFTGTFTGKGLEFGGSLIRPEATGFGGLYFVNQMLQTKGIDI 226          
BLAST of EY720830 vs. ExPASy Swiss-Prot
Match: DHE4_CHLSO (NADP-specific glutamate dehydrogenase (Fragment) OS=Chlorella sorokiniana PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.354e-21
Identity = 58/179 (32.40%), Postives = 94/179 (52.51%), Query Frame = 1
Query:  247 RSLLIPFREIKVECSIPKDDGSLATFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAAIPYGGAKGGIGCNPRELSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYSXFHGYSPAVVTGXAIDLGGSLGREAATGLGVFFGTEALLAEHGKSI 783
            + ++ P R I    S   D G+L    GFR+Q+ +A GP KGG+R+HP V+   +  LA    +K ++  +P GG KGG   +P+  S +E+ R  + F  ++   I   +DVPA D+G  ++ + ++  +Y         V+TG   + GGS  R  ATG G     E +L + G+S+
Sbjct:  126 KQIVEPERVITFRVSWLDDAGNLQVNRGFRVQYSSAIGPYKGGLRFHPSVNLSIMKFLAFEQIFKNSLTTLPMGGGKGGSDFDPKGKSDAEVMRFCQSFMTELQRHISYVQDVPAGDIGVGAREIGYLFGQYKRITKNYTGVLTGKGQEYGGSEIRPEATGYGAVLFVENVLKDKGESL 304          
The following BLAST results are available for this feature:
BLAST of EY720830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
DHE3_BACTN3.938e-2235.23Glutamate dehydrogenase OS=Bacteroides thetaiotaom... [more]
DHE4_HELPJ6.717e-2233.15NADP-specific glutamate dehydrogenase OS=Helicobac... [more]
DHE4_UNKP1.146e-2133.71NADP-specific glutamate dehydrogenase OS=Unknown p... [more]
DHE5_YEAST1.496e-2132.00NADP-specific glutamate dehydrogenase 2 OS=Sacchar... [more]
DHE4_YEAST2.553e-2131.43NADP-specific glutamate dehydrogenase 1 OS=Sacchar... [more]
DHE4_SACBA2.553e-2131.43NADP-specific glutamate dehydrogenase 1 OS=Sacchar... [more]
DHE4_HELPY2.553e-2132.60NADP-specific glutamate dehydrogenase OS=Helicobac... [more]
DHE4_GIBFU3.334e-2133.93NADP-specific glutamate dehydrogenase OS=Gibberell... [more]
DHE2_BACFR3.334e-2132.79NAD-specific glutamate dehydrogenase OS=Bacteroide... [more]
DHE4_CHLSO4.354e-2132.40NADP-specific glutamate dehydrogenase (Fragment) O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-014-H06-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720830 ID=EY720830; Name=EY720830; organism=Citrus sinensis; type=EST; length=861bp
CACGCGTCCGCAGTGGTGTCCTGCTGCATACATTGAGCCTTCCATATGCC
TACACCCCATTTGTTTATACAACTTTTTGCTTTATTATTTGTAGCTGACG
AGTTTTAATTTCACTTTCCTTTTGAGAATTCAGTTTCTTGTTTTCACTTT
TCAGTGTTTCGGTAGGCAGCCATGAATGCTCTTGCAGCCACCAACCGCAA
TTTTCGCTATGCAGCTCGAATTCTTGGGTTGGATTCTAAGCTTGAGAGAA
GCCTTTTAATACCCTTCAGAGAAATTAAAGTTGAATGCTCAATTCCGAAA
GATGATGGGTCGCTTGCAACCTTTGTTGGATTTAGAATCCAGCATGACAA
CGCCCGTGGCCCTATGAAAGGTGGAATCCGCTACCACCCGGAGGTTGACC
CGGATGAGGTGAATGCTTTGGCTCAACTGATGACATGGAAAACAGCTGTA
GCTGCTATTCCATATGGAGGAGCAAAGGGAGGGATTGGCTGCAATCCGAG
GGAGTTGAGTATGAGCGAGTTAGAACGTCTAACTCGCGTTTTCACTCAAA
AGATCCATGATCTTATTGGTATTCACAGGGATGTTCCTGCCCCTGACATG
GGAACTAATTCACAGACAATGGCATGGATCCTGGATGAATACTCANAATT
CCATGGGTACTCACCAGCAGTTGTTACCGGANAGGCAATTGATCTCGGGG
GATCACTCGGAAGGGAAGCTGCTACTGGACTTGGAGTGTTCTTTGGCACC
GAGGCTTTACTGGCTGAACATGGAAAATCAATTTCAATATGAAATTTGCT
ATCCAGGGGTTTGGAATGTGGGCTCCTGGGCAAGCAAATTTTCCATGAGC
ATGGGGGAAGG
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