EY720799
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY720799 vs. ExPASy Swiss-Prot
Match: RPB2_ENCCU (DNA-directed RNA polymerase II subunit RPB2 OS=Encephalitozoon cuniculi GN=RPB2 PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.371e-30 Identity = 67/151 (44.37%), Postives = 92/151 (60.93%), Query Frame = 3 Query: 18 GTERLYDGRTGEMVRSLIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSYQMHICRKCKNVANVIQXXXXXXXXXXXPYCRICDSGDDIVKANVPYGAKLLCQELFSMGI 470 G E +Y+G TG +R+ +F GPT+YQRL HM +DK+ R GP+ LTRQPV R R GG++FGEMERDC+I+HGA+A L ERL +SD+Y ++C C +A C+ C++ ++ +PY KLL QEL M I Sbjct: 992 GLEVMYNGMTGRKLRAQMFFGPTYYQRLKHMVDDKIHARARGPLQILTRQPVEGRSRDGGLRFGEMERDCIISHGASAFLKERLMDVSDAYSCYVCDFCGLLA---------MGGSKVNECKGCNNTTNVSMVEIPYAFKLLIQELMGMNI 1133
BLAST of EY720799 vs. ExPASy Swiss-Prot
Match: RPB2_CAEEL (DNA-directed RNA polymerase II subunit RPB2 OS=Caenorhabditis elegans GN=rpb-2 PE=2 SV=2) HSP 1 Score: 131.724 bits (330), Expect = 5.282e-30 Identity = 67/153 (43.79%), Postives = 90/153 (58.82%), Query Frame = 3 Query: 18 GTERLYDGRTGEMVRSLIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSYQMHICRKCK--NVANVIQXXXXXXXXXXXPYCRICDSGDDIVKANVPYGAKLLCQELFSMGI 470 G E +Y+G TG+ + + IF GPT+YQRL HM +DK+ R GP+ + RQP+ R R GG++FGEMERDC I+HGA L ERLF +SD Y +++C C VAN+ C+ C + + +PY KLL QEL SM I Sbjct: 1030 GNEVMYNGHTGKKLTTQIFFGPTYYQRLKHMVDDKIHSRARGPIQMMNRQPMEGRARDGGLRFGEMERDCQISHGATQFLRERLFEVSDPYHVYVCNNCGLIVVANLRTNSFE---------CKACRNKTQVSAVRIPYACKLLFQELMSMSI 1173
BLAST of EY720799 vs. ExPASy Swiss-Prot
Match: RPB2_SCHPO (DNA-directed RNA polymerase II subunit RPB2 OS=Schizosaccharomyces pombe GN=rpb2 PE=1 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 1.537e-29 Identity = 68/151 (45.03%), Postives = 90/151 (59.60%), Query Frame = 3 Query: 18 GTERLYDGRTGEMVRSLIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSYQMHICRKCKNVANVIQXXXXXXXXXXXPYCRICDSGDDIVKANVPYGAKLLCQELFSMGI 470 G E +Y G TG + + +F+GPT+YQRL H+ +DK+ R GPV LTRQPV R R GG++FGEMERDC I+HG ++ L ERLF SD+Y++ +C C +A CR C + + +PY AKLL QEL SM I Sbjct: 1057 GFEVMYHGHTGRKLVAQVFLGPTYYQRLKHLVDDKIHARARGPVQILTRQPVEGRSRDGGLRFGEMERDCQISHGCSSVLRERLFDCSDAYRVIVCDICGLIAIASYKKDSYE-------CRSCQNRTRFSQVYLPYAAKLLFQELMSMNI 1200
BLAST of EY720799 vs. ExPASy Swiss-Prot
Match: RPC2_YEAST (DNA-directed RNA polymerase III subunit RPC2 OS=Saccharomyces cerevisiae GN=RET1 PE=1 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 3.423e-29 Identity = 68/158 (43.04%), Postives = 91/158 (57.59%), Query Frame = 3 Query: 18 GTERLYDGRTGEMVRSLIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSYQMHICRKCKNVANVIQXXXXXXXXXXXPYCRICDSGDDIVKANVPYGAKLLCQELFSMGITLKFDAE 491 G + LY G TGE +++ IF GP +YQ+L HM DK+ R GP LTRQP R R GG++ GEMERDC+IA+GA+ L ERL SD++++ +C KC +C C S ++I+K +PY AKLL QEL SM I + E Sbjct: 1000 GKDMLYSGITGECLQAYIFFGPIYYQKLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMISSDAFEVDVCDKC-------------GLMGYSGWCTTCKSAENIIKMTIPYAAKLLFQELLSMNIAPRLRLE 1144
BLAST of EY720799 vs. ExPASy Swiss-Prot
Match: RPOB1_METTH (DNA-directed RNA polymerase subunit B' OS=Methanobacterium thermoautotrophicum GN=rpoB1 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 7.626e-29 Identity = 73/158 (46.20%), Postives = 88/158 (55.70%), Query Frame = 3 Query: 18 GTERLYDGRTGEMVRSLIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSYQMHICRKCKNVANVIQXXXXXXXXXXXPYCRICDSGDDIVKANVPYGAKLLCQELFSMGITLKFDAE 491 G E LY+G TGE + + IFIG +YQ+L HM+ DKV R+ GPV LTRQP R R GG++FGEMERDCLIAHGAA L ERL SD Y+ +C C +A YC IC+ + V Y KLL EL S+ I K E Sbjct: 451 GVESLYNGITGERIEAEIFIGVAYYQKLHHMTTDKVYARSRGPVQVLTRQPTEGRAREGGLRFGEMERDCLIAHGAALALKERLLDESDKYEALVCADCGMIA-------VYDKIRDKKYCPICEDSESF-PVEVSYAFKLLLDELKSLCIFPKLILE 600
BLAST of EY720799 vs. ExPASy Swiss-Prot
Match: RPOB1_METTW (DNA-directed RNA polymerase subunit B' OS=Methanobacterium thermoautotrophicum (strain Winter) GN=rpoB1 PE=3 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.699e-28 Identity = 70/158 (44.30%), Postives = 89/158 (56.33%), Query Frame = 3 Query: 18 GTERLYDGRTGEMVRSLIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSYQMHICRKCKNVANVIQXXXXXXXXXXXPYCRICDSGDDIVKANVPYGAKLLCQELFSMGITLKFDAE 491 G E LY+G TGE + + IFIG +YQ+L HM+ D++ R+ GPV LTRQP R R GG++FGEMERDCLIAHGAA L ERL SD Y+ +C +C +A YC IC+ + + Y KLL EL S+ I K E Sbjct: 452 GVETLYNGITGERIEAEIFIGVAYYQKLHHMTTDRIYARSRGPVQVLTRQPTEGRAREGGLRFGEMERDCLIAHGAALALKERLLDESDKYEALVCAECGMIA-------IYDKIRDKKYCPICEDSESF-PVEISYAFKLLLDELKSLCIFPKLVLE 601
BLAST of EY720799 vs. ExPASy Swiss-Prot
Match: RPB2_IIV3 (Probable DNA-directed RNA polymerase II subunit RPB2 homolog OS=Invertebrate iridescent virus 3 GN=IIV3-009R PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.699e-28 Identity = 65/156 (41.67%), Postives = 94/156 (60.26%), Query Frame = 3 Query: 18 GTERLYDGRTGEMVRSLIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSYQMHICRKCKNVANVIQXXXXXXXXXXXPYCRICDSGDDIVKANVPYGAKLLCQELFSMGITLKFD 485 G+E +Y G TGE ++S IF+GPT+Y RL HM +DK+ R+ G V L RQP R + GG++FGEME+DC++ HGA L+ER+F SD +Q+ +C+ C +++ + C C S ++ + N+PY K L QEL MGI K D Sbjct: 997 GSEVMYSGFTGERIQSTIFMGPTYYHRLKHMVKDKMHARSHGQVTTLHRQPNCGRSQGGGLRFGEMEKDCILVHGATQFLNERMFLNSDPFQIDVCKDCGMMSSTSKK------------CHHCGS-INVKRCNIPYSCKNLLQELNGMGIKTKID 1139
BLAST of EY720799 vs. ExPASy Swiss-Prot
Match: RPC2_DROME (DNA-directed RNA polymerase III subunit RPC2 OS=Drosophila melanogaster GN=RpIII128 PE=1 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 3.204e-27 Identity = 63/158 (39.87%), Postives = 89/158 (56.33%), Query Frame = 3 Query: 18 GTERLYDGRTGEMVRSLIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSYQMHICRKCKNVANVIQXXXXXXXXXXXPYCRICDSGDDIVKANVPYGAKLLCQELFSMGITLKFDAE 491 G + Y G TG + + I+ GP +YQ+L HM +DK+ R GP LTRQP R R GG++ GEMERDCLI++GA+ + ERL SD++++ +CR C +A +C C S ++ K ++PY KLL QEL SM + K E Sbjct: 991 GKDFFYSGITGTPLEAYIYSGPVYYQKLKHMVQDKMHARARGPKAVLTRQPTQGRSREGGLRLGEMERDCLISYGASMLIMERLMISSDAFEVDVCRTCGRMA-------------YCSWCHFCQSSANVSKISMPYACKLLFQELTSMNVVPKMILE 1135
BLAST of EY720799 vs. ExPASy Swiss-Prot
Match: RPC2_SCHPO (DNA-directed RNA polymerase III subunit RPC2 OS=Schizosaccharomyces pombe GN=rpc2 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 7.138e-27 Identity = 67/158 (42.41%), Postives = 87/158 (55.06%), Query Frame = 3 Query: 18 GTERLYDGRTGEMVRSLIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSYQMHICRKCKNVANVIQXXXXXXXXXXXPYCRICDSGDDIVKANVPYGAKLLCQELFSMGITLKFDAE 491 G + L G TGE + + IF+GP +YQ+L HM DK+ R GP LTRQP R R GG++ GEMERDCLIA+GA+ L ERL SD+ + +C +C +C C S ++VK +PY AKLL QEL SM I + E Sbjct: 1016 GKDMLTSGITGETLEAYIFMGPIYYQKLKHMVMDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIAYGASQLLLERLMISSDACDVDVCGQC-------------GLLGYKGWCNSCQSTREVVKMTIPYAAKLLFQELLSMNIVPRLALE 1160
BLAST of EY720799 vs. ExPASy Swiss-Prot
Match: RPOB_THECE (DNA-directed RNA polymerase subunit B OS=Thermococcus celer GN=rpoB PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 9.323e-27 Identity = 65/151 (43.05%), Postives = 85/151 (56.29%), Query Frame = 3 Query: 18 GTERLYDGRTGEMVRSLIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSYQMHICRKCKNVANVIQXXXXXXXXXXXPYCRICDSGDDIVKANVPYGAKLLCQELFSMGI 470 G E +YDG TG + + +F+G +YQRL HM DK+ R+ GPV LT+QP R R GG++FGEMERD LI HGAA L ERL SD ++ +C C ++A YC +C + I K + Y KLL EL +MGI Sbjct: 969 GREVMYDGITGRRLEADVFVGVIYYQRLHHMVADKMHARSRGPVQVLTKQPTEGRAREGGLRFGEMERDVLIGHGAAMLLIERLLEESDKTEVWVCENCGHIA-------LEDKRRGKVYCPVCGEEERISKVEMSYAFKLLLDELKAMGI 1112 The following BLAST results are available for this feature:
BLAST of EY720799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY720799 ID=EY720799; Name=EY720799; organism=Citrus sinensis; type=EST; length=879bpback to top |