EY720797

Overview
NameEY720797
Unique NameEY720797
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720797 vs. ExPASy Swiss-Prot
Match: UBE2C_DICDI (Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum GN=ube2c PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.186e-21
Identity = 53/124 (42.74%), Postives = 73/124 (58.87%), Query Frame = 2
Query:   23 DETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDRRDDFKK 394
            D  NIF W  TI G  DT+YE   F   + FP++YP  PPTVKF T+ +HPNV  +G +C+ IL              ++W PV+ V S+++SI S+L  PN+ESP N  AA  W   +D++KK
Sbjct:   31 DGDNIFNWIGTIQGAKDTVYEQMEFKMSLKFPTDYPYKPPTVKFETQCFHPNVDNNGNICLDIL-------------KDKWSPVYNVRSLLISIQSLLGEPNNESPLNSYAASLW-SNQDEYKK 140          
BLAST of EY720797 vs. ExPASy Swiss-Prot
Match: UBE2C_SPISO (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C PE=1 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.451e-21
Identity = 50/124 (40.32%), Postives = 69/124 (55.65%), Query Frame = 2
Query:   23 DETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDRRDDFKK 394
            D  N+F+W  T+ GP DT+YE   +   + FPS+YP  PP VKFTT  WHPNV   G +C+ IL              E W   + V +I+LS+ S+L  PN+ SP N +AA  W   + ++KK
Sbjct:   55 DGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDIL-------------KENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEYKK 164          
BLAST of EY720797 vs. ExPASy Swiss-Prot
Match: UBE2C_DROME (Ubiquitin-conjugating enzyme E2 C OS=Drosophila melanogaster GN=vih PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.815e-20
Identity = 49/124 (39.52%), Postives = 73/124 (58.87%), Query Frame = 2
Query:   23 DETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDRRDDFKK 394
            D  NIF+W  TI GP +T+Y G  +   + FP++YP + P VKF T  +HPNV   G +C+ IL              ++W  ++ V +I+LSI S+L  PN+ESP N +AA  W D++ ++KK
Sbjct:   57 DGENIFKWVGTIAGPRNTVYSGQTYRLSLDFPNSYPYAAPVVKFLTSCFHPNVDLQGAICLDIL-------------KDKWSALYDVRTILLSIQSLLGEPNNESPLNAQAAMMWNDQK-EYKK 166          
BLAST of EY720797 vs. ExPASy Swiss-Prot
Match: UBCD1_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=eff PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 4.983e-20
Identity = 45/129 (34.88%), Postives = 71/129 (55.04%), Query Frame = 2
Query:   32 NIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDRRDDFKKKVGRCVRR 418
            ++F W  TI+GPPD+ Y+GG F   + FP++YP  PP V FTT I+HPN+  +G +C+ IL               +W P  T+  ++LSI S+L  PN + P   E A+ ++  R+ + +      R+
Sbjct:   29 DLFHWQATIMGPPDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNELAREWTRK 144          
BLAST of EY720797 vs. ExPASy Swiss-Prot
Match: UBC9_SCHPO (SUMO-conjugating enzyme ubc9 OS=Schizosaccharomyces pombe GN=hus5 PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.508e-20
Identity = 47/123 (38.21%), Postives = 68/123 (55.28%), Query Frame = 2
Query:   32 NIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDRRDDFKKKV 400
            ++  W V I G P T +EGG +   M+FP  YP  PP  +FT  ++HPNVYP G VC+SIL+             E W P  T++ I+L I  +L  PN  SPA  EA   ++  + +++K+V
Sbjct:   37 DLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSGTVCLSILN-----------EEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRV 148          
BLAST of EY720797 vs. ExPASy Swiss-Prot
Match: UBC1_MAGGR (Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnaporthe grisea GN=UBC1 PE=3 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 1.110e-19
Identity = 49/136 (36.03%), Postives = 73/136 (53.68%), Query Frame = 2
Query:   11 AGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDRRDDFKKKVGRCVRR 418
            AG V E ++F W  TI+GP D+ Y GG F   + FP++YP  PP V FTT I+HPN+  +G +C+ IL              ++W P  T+  ++LSI SML+ PN + P   E A  ++  R  ++       R+
Sbjct:   23 AGPVGE-DLFHWQATIMGPSDSPYAGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILR-------------DQWSPALTISKVLLSICSMLTDPNPDDPLVPEIAHVYKTARAQYESTAREWTRK 144          
BLAST of EY720797 vs. ExPASy Swiss-Prot
Match: UB2D1_MOUSE (Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.110e-19
Identity = 42/121 (34.71%), Postives = 70/121 (57.85%), Query Frame = 2
Query:   32 NIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDRRDDFKK 394
            ++F W  TI+GPPD+ Y+GG F   + FP++YP  PP + FTT+I+HPN+  +G +C+ IL               +W P  TV  ++LSI S+L  PN + P   + A+ ++  ++ + +
Sbjct:   29 DLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILR-------------SQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNR 136          
BLAST of EY720797 vs. ExPASy Swiss-Prot
Match: UB2D1_HUMAN (Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.110e-19
Identity = 42/121 (34.71%), Postives = 70/121 (57.85%), Query Frame = 2
Query:   32 NIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDRRDDFKK 394
            ++F W  TI+GPPD+ Y+GG F   + FP++YP  PP + FTT+I+HPN+  +G +C+ IL               +W P  TV  ++LSI S+L  PN + P   + A+ ++  ++ + +
Sbjct:   29 DLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILR-------------SQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNR 136          
BLAST of EY720797 vs. ExPASy Swiss-Prot
Match: UB2D1_BOVIN (Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.110e-19
Identity = 42/121 (34.71%), Postives = 70/121 (57.85%), Query Frame = 2
Query:   32 NIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDRRDDFKK 394
            ++F W  TI+GPPD+ Y+GG F   + FP++YP  PP + FTT+I+HPN+  +G +C+ IL               +W P  TV  ++LSI S+L  PN + P   + A+ ++  ++ + +
Sbjct:   29 DLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILR-------------SQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNR 136          
BLAST of EY720797 vs. ExPASy Swiss-Prot
Match: U2D2B_RAT (Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus GN=Ube2d2b PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.110e-19
Identity = 49/128 (38.28%), Postives = 72/128 (56.25%), Query Frame = 2
Query:   11 AGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDRRDDFKK 394
            AG V E ++F W  TI+GP D+ Y+GG F   + FP+ YP  PP V+FTT I+HPNV  +G +C+ IL               +W P  T+  ++LSI S+L  PN + P   E A+ ++  RD + +
Sbjct:   23 AGPVGE-DMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEFTTRIYHPNVNSNGSICLDILR-------------SQWSPALTISKVLLSISSLLCDPNPDDPLVPEIAQIYKTDRDKYNR 136          
The following BLAST results are available for this feature:
BLAST of EY720797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 212
Match NameE-valueIdentityDescription
UBE2C_DICDI1.186e-2142.74Probable ubiquitin-conjugating enzyme E2 C OS=Dict... [more]
UBE2C_SPISO3.451e-2140.32Ubiquitin-conjugating enzyme E2 C OS=Spisula solid... [more]
UBE2C_DROME3.815e-2039.52Ubiquitin-conjugating enzyme E2 C OS=Drosophila me... [more]
UBCD1_DROME4.983e-2034.88Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophi... [more]
UBC9_SCHPO6.508e-2038.21SUMO-conjugating enzyme ubc9 OS=Schizosaccharomyce... [more]
UBC1_MAGGR1.110e-1936.03Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnapor... [more]
UB2D1_MOUSE1.110e-1934.71Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus... [more]
UB2D1_HUMAN1.110e-1934.71Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens... [more]
UB2D1_BOVIN1.110e-1934.71Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus G... [more]
U2D2B_RAT1.110e-1938.28Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norv... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-014-D07-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720797 ID=EY720797; Name=EY720797; organism=Citrus sinensis; type=EST; length=880bp
CACGCGTCCGGCCGGGTTGGTGGATGAGACAAATATCTTTGAATGGAGTG
TTACAATTATTGGACCACCTGATACTCTTTATGAGGGGGGATTTTTCAAT
GCCATTATGAGCTTTCCATCAAACTACCCTAATAGCCCACCTACAGTGAA
GTTTACAACAGAGATTTGGCATCCTAATGTCTATCCGGATGGGCGTGTCT
GCATATCAATCCTTCATCCTCCAGGTGACGACCCTAATGGATATGAGCTT
GCAAGTGAGCGCTGGATGCCTGTTCATACTGTTGAAAGTATCGTTTTGAG
TATCATATCAATGCTTTCCGGTCCTAATGATGAATCTCCTGCAAATGTCG
AAGCTGCAAAAGAATGGAGAGACAGGAGAGATGACTTCAAGAAGAAAGTA
GGCCGCTGTGTGAGAAGATCACAAGAAATGTTGTAATCCAACTGCAGGCA
CTCTTTTTTTCTCTACCTATGTGTTTGTACGGGAAATGTCTTGATTTAAT
TGTGTGGGGGGAACTGGGTTCTGTGGGTAATGTCCATGTGCTTGGTCTTG
TGTACACTGGCATTATGAAGTACTCTCAACCATCTCTCTCGGTTTCTCTG
CATGGTCAAGTCACTGTAACGACTGGGAAACTCCATGTATTCCAGAAGCG
TCTTTGGTTAGTTTTAGTCCCAAATGTTCTGTCATGCACTTTAAAAAAAA
AAAATAAAAAAGGGCGGCCCGCCAAAGGGTCCAACTTTACTACGCCGTGC
TGCGAAATCCTAGCACTCCTATATGGCCCCAAAGTCCGTCCGCTGGCCGG
CTGTTACAACGCCAGAGGCGGGAAAAGCCGGGCCTCCCCCGACGACTCCC
CTCGCGCACTCCCCCTTTCCTCCGCGGGCT
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