FE659079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FE659079 vs. ExPASy Swiss-Prot
Match: EXP29_ORYSJ (Expansin-A29 OS=Oryza sativa subsp. japonica GN=EXPA29 PE=2 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 3.257e-30 Identity = 58/102 (56.86%), Postives = 73/102 (71.57%), Query Frame = 2 Query: 2 GNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVN--DPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 298 GNLY+QGYGT TAALSTALF++G SCG CY + C DP+WC G ++ VTATNFC GGWCNPP+ HFD++QP ++ I YR G+VPVA++R Sbjct: 58 GNLYTQGYGTRTAALSTALFDDGASCGQCYALTCDARADPRWCRAGASVTVTATNFCPPNYALPSDDGGWCNPPRPHFDMAQPAWERIGVYRGGIVPVAFRR 159
BLAST of FE659079 vs. ExPASy Swiss-Prot
Match: EXP14_ORYSJ (Expansin-A14 OS=Oryza sativa subsp. japonica GN=EXPA14 PE=2 SV=2) HSP 1 Score: 130.183 bits (326), Expect = 3.257e-30 Identity = 58/102 (56.86%), Postives = 72/102 (70.59%), Query Frame = 2 Query: 2 GNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVND--PKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 298 G+LYSQGYGT AALSTALFN+G SCG CY+I C P+WC PG T+ +TATNFC GGWCNPP+ HFD++QP ++ I Y AG++PV Y+R Sbjct: 58 GDLYSQGYGTRNAALSTALFNDGASCGQCYKIACDRKRAPQWCKPGVTVTITATNFCPPNWDLPSDNGGWCNPPRPHFDMAQPAWEKIGIYSAGIIPVIYQR 159
BLAST of FE659079 vs. ExPASy Swiss-Prot
Match: EXP12_ORYSJ (Expansin-A12 OS=Oryza sativa subsp. japonica GN=EXPA12 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 7.257e-30 Identity = 57/101 (56.44%), Postives = 73/101 (72.28%), Query Frame = 2 Query: 2 GNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 298 GNLYS GYGTNTAALS+ALFN+G +CG CY+I C ++ KWC GT + +TATN C GGWCNPP+QHFD++QP ++ I YR G+VPV ++R Sbjct: 48 GNLYSTGYGTNTAALSSALFNDGAACGECYQITCDQSNSKWCKAGTSVTITATNLCPPDYSKPSNDGGWCNPPRQHFDMAQPAWEQIGVYRGGIVPVNFQR 148
BLAST of FE659079 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 2.758e-29 Identity = 58/102 (56.86%), Postives = 72/102 (70.59%), Query Frame = 2 Query: 2 GNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPG--TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 298 GNLY+ GYG AALS+ALFN+G CG+CY I C + KWC PG +I +TATN C GGWCNPP+QHFD+SQP +++IA Y+AG+VPV YKR Sbjct: 52 GNLYNAGYGLYNAALSSALFNDGAMCGACYTITCDTSQTKWCKPGGNSITITATNLCPPNWALPSNSGGWCNPPRQHFDMSQPAWENIAVYQAGIVPVNYKR 153
BLAST of FE659079 vs. ExPASy Swiss-Prot
Match: EXP27_ORYSJ (Putative expansin-A27 OS=Oryza sativa subsp. japonica GN=EXPA27 PE=3 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 2.758e-29 Identity = 58/102 (56.86%), Postives = 69/102 (67.65%), Query Frame = 2 Query: 2 GNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDP--KWCLP-GTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 298 GNLY QGYG AALSTALFN+G +CG CY I C D +WC P G + VTATN C GGWCNPP++HFD+SQP ++ I YRAG+VPV Y+R Sbjct: 51 GNLYDQGYGLENAALSTALFNDGAACGQCYLIVCDTDKAGRWCKPRGAVTVTATNLCPPNWALPSDGGGWCNPPRRHFDMSQPAWERIGVYRAGIVPVLYRR 152
BLAST of FE659079 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2) HSP 1 Score: 127.102 bits (318), Expect = 2.758e-29 Identity = 56/102 (54.90%), Postives = 72/102 (70.59%), Query Frame = 2 Query: 2 GNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVN--DPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 298 GNLY GYGTNTAALS+ALFN+G SCG CY+I C + +P+WCL G T+ +T TN C GGWCNPP+ HFD+++P + I Y+AG+VPV Y+R Sbjct: 56 GNLYWSGYGTNTAALSSALFNDGASCGQCYQIACDHQAEPRWCLQGRTVTITGTNLCPPNYALSSNDGGWCNPPRTHFDMAEPAWLQIGIYKAGIVPVLYQR 157
BLAST of FE659079 vs. ExPASy Swiss-Prot
Match: EXP11_ARATH (Expansin-A11 OS=Arabidopsis thaliana GN=EXPA11 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 2.758e-29 Identity = 57/102 (55.88%), Postives = 73/102 (71.57%), Query Frame = 2 Query: 2 GNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVN--DPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 298 G+LYS GYGT TAALSTALFN+G SCG CY I C + D +WCL G ++++TATNFC GGWCNPP +HFD++QP ++ I YR G+VPV ++R Sbjct: 50 GDLYSAGYGTMTAALSTALFNDGASCGECYRITCDHAADSRWCLKGASVVITATNFCPPNFALPNNNGGWCNPPLKHFDMAQPAWEKIGIYRGGIVPVVFQR 151
BLAST of FE659079 vs. ExPASy Swiss-Prot
Match: EXP33_ORYSJ (Expansin-A33 OS=Oryza sativa subsp. japonica GN=EXPA33 PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.787e-28 Identity = 57/101 (56.44%), Postives = 70/101 (69.31%), Query Frame = 2 Query: 2 GNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC-VNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 298 GNLY+ GYG N AALS+ALFN+G CG+CY I C + WC PGT I +TATN C GGWCNPP++HFD+SQP + IA Y+AG+VPV +KR Sbjct: 47 GNLYNAGYGLNNAALSSALFNDGAMCGACYTIACDTSQSTWCKPGTSITITATNLCPPNYAKKSDAGGWCNPPRKHFDMSQPAWTSIAIYQAGIVPVNFKR 147
BLAST of FE659079 vs. ExPASy Swiss-Prot
Match: EXP31_ORYSJ (Expansin-A31 OS=Oryza sativa subsp. japonica GN=EXPA31 PE=2 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 3.982e-28 Identity = 57/102 (55.88%), Postives = 68/102 (66.67%), Query Frame = 2 Query: 2 GNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVND--PKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 298 GNLY QGYG + AALS ALFN+G SCG CY I C P+WC GT + VTATN C GGWCNPP+ HFD+SQP ++ I Y+AG+VPV Y+R Sbjct: 52 GNLYDQGYGVDNAALSQALFNDGASCGQCYLIVCDTSRAPQWCKAGTAVTVTATNLCPPNWALPSDGGGWCNPPRPHFDMSQPAWEQIGVYQAGIVPVLYQR 153
BLAST of FE659079 vs. ExPASy Swiss-Prot
Match: EXP28_ORYSJ (Expansin-A28 OS=Oryza sativa subsp. japonica GN=EXPA28 PE=2 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 3.982e-28 Identity = 57/102 (55.88%), Postives = 68/102 (66.67%), Query Frame = 2 Query: 2 GNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 298 GNLY+QGYG AALSTALFN G SCG CY I C P+WC GT + +TATN C GGWCNPP+ HFD+SQP ++ I YRAG+VPV Y++ Sbjct: 51 GNLYTQGYGVYNAALSTALFNGGASCGQCYLIMCDASKTPEWCKAGTAVTITATNLCPPNWALANDDGGWCNPPRPHFDMSQPAWETIGIYRAGIVPVLYQQ 152 The following BLAST results are available for this feature:
BLAST of FE659079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >FE659079 ID=FE659079; Name=FE659079; organism=Citrus sinensis; type=EST; length=299bpback to top |