FE659079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FE659079 vs. ExPASy Swiss-Prot
Match: EXP19_ORYSJ (Expansin-A19 OS=Oryza sativa subsp. japonica GN=EXPA19 PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.731e-23 Identity = 52/102 (50.98%), Postives = 64/102 (62.75%), Query Frame = 2 Query: 2 GNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 298 GNLY QGYG N AALST LFN+G SCG CY I C P WC G I VT TN+C GGWCN + HFD+SQP +++I Y AG++P+ Y++ Sbjct: 47 GNLYDQGYGINNAALSTPLFNDGASCGQCYLIICDYSKAPDWCKLGKAITVTGTNYC--PPNYDLPYGGWCNATRPHFDMSQPAWENIGIYNAGIIPILYQQ 146
BLAST of FE659079 vs. ExPASy Swiss-Prot
Match: EXP17_ORYSJ (Expansin-A17 OS=Oryza sativa subsp. japonica GN=EXPA17 PE=2 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 2.261e-23 Identity = 48/94 (51.06%), Postives = 61/94 (64.89%), Query Frame = 2 Query: 23 YGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 298 Y T TAALST LF +G CG CYE++CV P WC PG+ +++T TN C GGWCNPP+ HFD++ P F +AQ AG+VPV Y+R Sbjct: 85 YSTKTAALSTPLFADGNGCGQCYELRCVKSP-WCNPGSPSVVITGTNLCPPNWYLPNDDGGWCNPPRHHFDMAPPSFLKLAQRVAGIVPVQYRR 177
BLAST of FE659079 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3) HSP 1 Score: 106.686 bits (265), Expect = 3.857e-23 Identity = 52/99 (52.53%), Postives = 65/99 (65.66%), Query Frame = 2 Query: 2 GNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 298 G+L GYG TAALSTALFN+G SCG+CYEI C +P+ CL G+I +TAT+ C WC P +HFDLS P+F IAQ +A +VPV Y+R Sbjct: 70 GDLNKHGYGLATAALSTALFNSGASCGACYEIMCSPNPQGCLSGSIKITATDLC-------PPGSAWCYLPNKHFDLSLPMFIKIAQVKAKMVPVRYRR 161
BLAST of FE659079 vs. ExPASy Swiss-Prot
Match: EXP13_ARATH (Expansin-A13 OS=Arabidopsis thaliana GN=EXPA13 PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 6.579e-23 Identity = 48/100 (48.00%), Postives = 64/100 (64.00%), Query Frame = 2 Query: 2 GNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT-IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 298 G+L GYG T LS LF G CG+C+E++CV+D +WC+PGT I++TATNFC GG CNPP +HF L F+ IA ++AG +PV Y+R Sbjct: 64 GDLVKSGYGMATVGLSETLFERGQICGACFELRCVDDLRWCIPGTSIILTATNFCAPNYGFDPDGGGHCNPPNKHFVLPIEAFEKIAIWKAGNMPVQYRR 163
BLAST of FE659079 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 7.273e-22 Identity = 46/101 (45.54%), Postives = 65/101 (64.36%), Query Frame = 2 Query: 2 GNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPG--TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 298 G+L YG TA +S ALF G +CG CYE++CVN WCL G T++VTAT+FC GGWCN P++HF++S+ F +A+ +A +VPV ++R Sbjct: 58 GDLDIFRYGRYTAGVSGALFGRGSACGGCYEVRCVNHVLWCLRGSPTVVVTATDFCAPNLGLSDDYGGWCNFPKEHFEMSEAAFLRVAKAKADIVPVQFRR 158
BLAST of FE659079 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 4.715e-21 Identity = 51/102 (50.00%), Postives = 63/102 (61.76%), Query Frame = 2 Query: 5 NLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQY-RAGVVPVAYKR 298 N Y G+G +TAALS LF +G SCG CY+++C DPKWCL G + VTATNFC GWCN P+ HFD+S P F IA+ G+VPV Y+R Sbjct: 52 NPYHAGFGAHTAALSGELFRSGESCGGCYQVRCDFPADPKWCLRGAAVTVTATNFC-----PTNNNNGWCNLPRHHFDMSSPAFFRIARRGNEGIVPVFYRR 148
BLAST of FE659079 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 1.050e-20 Identity = 44/101 (43.56%), Postives = 63/101 (62.38%), Query Frame = 2 Query: 2 GNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGT--IMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 298 G+L + +A LS LFN G SCG+C E++CVN +WCL G+ ++VTAT+FC GGWCN P++H +LS F IA+ RA ++P+ Y+R Sbjct: 54 GDLRQSSFAGYSAGLSGKLFNRGSSCGACLEVRCVNHIRWCLQGSPSVVVTATDFCPPNSGLSSDYGGWCNFPKEHLELSHAAFTGIAETRAEMIPIQYRR 154
BLAST of FE659079 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.372e-20 Identity = 50/102 (49.02%), Postives = 62/102 (60.78%), Query Frame = 2 Query: 2 GNLYSQGYGTNTAALSTALFNNGLSCGSCYEIKC--VNDPKWCLPG-TIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 298 GNLY Q YG N AALST LFN+G SCG CY I C P WC G I VT TN+ GGWCN + +FD+SQP +++I Y AG+VP+ Y++ Sbjct: 47 GNLYDQRYGINNAALSTPLFNDGASCGQCYLIICDYGKAPDWCKLGKAITVTGTNY-----------GGWCNATRPYFDMSQPAWENIGIYSAGIVPILYQQ 137
BLAST of FE659079 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.520e-11 Identity = 38/95 (40.00%), Postives = 53/95 (55.79%), Query Frame = 2 Query: 14 SQGYGTNTAALSTALFNNGLSCGSCYEIKCVNDPKWCLPGTIMVTATNFCXXXXXXXXXXGGWCNPPQQHFDLSQPVFQHIAQYRAGVVPVAYKR 298 + GYG TAA+S ALF+NG CG+CYE+K + T++VTATN +HFDL+ P F IA+ + GVVPV+Y++ Sbjct: 109 ADGYGAMTAAVSPALFDNGAGCGACYELKGDSGK------TVVVTATNQAPPPVNGMKG---------EHFDLTMPAFLSIAEEKLGVVPVSYRK 188 The following BLAST results are available for this feature:
BLAST of FE659079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 59
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Sequences
The
following sequences are available for this feature:
EST sequence >FE659079 ID=FE659079; Name=FE659079; organism=Citrus sinensis; type=EST; length=299bpback to top |