FE659078

Overview
NameFE659078
Unique NameFE659078
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length269
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FE659078 vs. ExPASy Swiss-Prot
Match: LOXX_SOYBN (Seed lipoxygenase OS=Glycine max GN=LOX1.4 PE=1 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.789e-20
Identity = 40/84 (47.62%), Postives = 54/84 (64.29%), Query Frame = -1
Query:   18 SINTGHADLRHESWWPTLINGDDLVSILTTIIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLVPDENDPEYTSFLAGPHKYFL 269
            ++  GH DL+ + WWP +   +DL+   + I+W ASA HAA+NFGQYPYGG + NRP L RR +P E  PEY   +  P K +L
Sbjct:  678 AVEKGHGDLKEKPWWPKMQTTEDLIQSCSIIVWTASALHAAVNFGQYPYGGLILNRPTLARRFIPAEGTPEYDEMVKNPQKAYL 761          
BLAST of FE659078 vs. ExPASy Swiss-Prot
Match: LOX2_PEA (Seed lipoxygenase-2 OS=Pisum sativum GN=LOX1.2 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.789e-20
Identity = 43/83 (51.81%), Postives = 54/83 (65.06%), Query Frame = -1
Query:   18 INTGHADLRHESWWPTLINGDDLVSILTTIIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLVPDENDPEYTSFLAGPHKYFL 266
            +  GH DL+ + WWP L   D+LV + T IIW ASA HAA+NFGQYPYGG + NRP L RRL+P+E   EY   +    K +L
Sbjct:  679 VEKGHGDLKDKPWWPKLQTFDELVEVCTIIIWTASALHAAVNFGQYPYGGLILNRPTLSRRLLPEEGTAEYDEMVKSSQKAYL 761          
BLAST of FE659078 vs. ExPASy Swiss-Prot
Match: LOX1_SOYBN (Seed lipoxygenase-1 OS=Glycine max GN=LOX1.1 PE=1 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 2.336e-20
Identity = 42/89 (47.19%), Postives = 57/89 (64.04%), Query Frame = -1
Query:    3 SINTGHADLRHESWWPTLINGDDLVSILTTIIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLVPDENDPEYTSFLAGPHKYFLLALPS 269
            ++  GH DL+ + WWP L   +DLV +   IIW+ASA HAA+NFGQYPYGG + NRP   RRL+P++  PEY   +    K +L  + S
Sbjct:  652 AVEKGHGDLKDKPWWPKLQTLEDLVEVCLIIIWIASALHAAVNFGQYPYGGLIMNRPTASRRLLPEKGTPEYEEMINNHEKAYLRTITS 740          
BLAST of FE659078 vs. ExPASy Swiss-Prot
Match: LOXA_SOLLC (Lipoxygenase A OS=Solanum lycopersicum GN=LOX1.1 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.797e-20
Identity = 40/80 (50.00%), Postives = 52/80 (65.00%), Query Frame = -1
Query:   18 GHADLRHESWWPTLINGDDLVSILTTIIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLVPDENDPEYTSFLAGPHKYFL 257
            GH D ++E WW  +    +L+   TTIIW+ASA HAA+NFGQYPY GY+PNRP + R+ +P+   PEY      P K FL
Sbjct:  678 GHGDKKNEPWWAEMETPQELIDSCTTIIWIASALHAAVNFGQYPYAGYLPNRPTVSRKFMPEPGTPEYEELKKNPDKAFL 757          
BLAST of FE659078 vs. ExPASy Swiss-Prot
Match: LOX1_ARATH (Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.159e-19
Identity = 41/80 (51.25%), Postives = 52/80 (65.00%), Query Frame = -1
Query:   18 GHADLRHESWWPTLINGDDLVSILTTIIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLVPDENDPEYTSFLAGPHKYFL 257
            GH D + E WWP +   ++LV   T IIW+ASA HAA+NFGQYP  GY+PNRP + R+ +P EN PE+      P K FL
Sbjct:  677 GHGDKKSEPWWPKMQTREELVESCTIIIWVASALHAAVNFGQYPVAGYLPNRPTISRQYMPKENTPEFEELEKNPDKVFL 756          
BLAST of FE659078 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.978e-19
Identity = 43/87 (49.43%), Postives = 56/87 (64.37%), Query Frame = -1
Query:    3 GHADLRHESWWPTLINGDDLVSILTTIIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLVP--DENDPEYTSFLAGPHKYFLLALPS 257
            GHAD + E WWP     ++LV ILT I+W+ S  HAA+NFGQY Y GY PNRP ++RR +P  +  D E   F+A P +  L +LPS
Sbjct:  712 GHADKKDEPWWPVCDTKENLVQILTIIMWVTSGHHAAVNFGQYHYAGYFPNRPTVVRRNIPVEENRDDEMKKFMARPEEVLLQSLPS 798          
BLAST of FE659078 vs. ExPASy Swiss-Prot
Match: LOX4_SOYBN (Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.406e-19
Identity = 38/83 (45.78%), Postives = 53/83 (63.86%), Query Frame = -1
Query:   18 INTGHADLRHESWWPTLINGDDLVSILTTIIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLVPDENDPEYTSFLAGPHKYFL 266
            +  GH DL+ + WW  +   ++LV     +IW+ASA HAA+NFGQYPYGG + NRP + RR +P++  PEY +    P K FL
Sbjct:  667 VEVGHGDLKDKPWWQKMQTREELVEASAILIWIASALHAAVNFGQYPYGGLILNRPTISRRFMPEKGSPEYDALAKNPEKEFL 749          
BLAST of FE659078 vs. ExPASy Swiss-Prot
Match: LOX22_HORVU (Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare GN=LOX2.2 PE=1 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.406e-19
Identity = 45/86 (52.33%), Postives = 55/86 (63.95%), Query Frame = -1
Query:    3 GHADLRHESWWPTLINGDDLVSILTTIIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLVPDENDP-EYTSFLAGPHKYFLLALPS 257
            GH D + E WWP L   + LV +L TI+W+ SA HAA+NFGQYP  GYVPN P + RR +P E  P E  +F A P K +L  LPS
Sbjct:  744 GHPDKQDEPWWPELDCHESLVQVLATIMWVTSAHHAAVNFGQYPMAGYVPNHPSIARRNMPCEMGPEEMLAFKAAPEKVWLDTLPS 829          
BLAST of FE659078 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 5.754e-19
Identity = 43/89 (48.31%), Postives = 50/89 (56.18%), Query Frame = -1
Query:    3 NTGHADLRHESWWPTLINGDDLVSILTTIIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLVP--DENDPEYTSFLAGPHKYFLLALPS 263
            N GH D + E WWP L   DDL+ ++TTI W+ S  HAA+NFGQY YGGY PNRP   R  +P  D  D     F   P K  L   PS
Sbjct:  710 NIGHGDKKDEPWWPVLKTQDDLIGVVTTIAWVTSGHHAAVNFGQYGYGGYFPNRPTTTRIRMPTEDPTDEALKEFYESPEKVLLKTYPS 798          
BLAST of FE659078 vs. ExPASy Swiss-Prot
Match: LOXA_PHAVU (Lipoxygenase 1 OS=Phaseolus vulgaris GN=LOXA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.515e-19
Identity = 39/84 (46.43%), Postives = 54/84 (64.29%), Query Frame = -1
Query:   18 SINTGHADLRHESWWPTLINGDDLVSILTTIIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLVPDENDPEYTSFLAGPHKYFL 269
            ++  GH DL+ + WWP L    DL+   + IIW+ASA HAA+NFGQYPYGG++ NRP + RRL+P+    EY    +   K +L
Sbjct:  675 AVEKGHGDLKDKPWWPKLNTPQDLIHTCSIIIWIASALHAAVNFGQYPYGGFILNRPTITRRLLPEPGTKEYGELTSNYQKAYL 758          
The following BLAST results are available for this feature:
BLAST of FE659078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
LOXX_SOYBN1.789e-2047.62Seed lipoxygenase OS=Glycine max GN=LOX1.4 PE=1 SV... [more]
LOX2_PEA1.789e-2051.81Seed lipoxygenase-2 OS=Pisum sativum GN=LOX1.2 PE=... [more]
LOX1_SOYBN2.336e-2047.19Seed lipoxygenase-1 OS=Glycine max GN=LOX1.1 PE=1 ... [more]
LOXA_SOLLC6.797e-2050.00Lipoxygenase A OS=Solanum lycopersicum GN=LOX1.1 P... [more]
LOX1_ARATH1.159e-1951.25Lipoxygenase 1 OS=Arabidopsis thaliana GN=LOX1 PE=... [more]
LOX23_HORVU1.978e-1949.43Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare... [more]
LOX4_SOYBN4.406e-1945.78Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=1 SV=1[more]
LOX22_HORVU4.406e-1952.33Lipoxygenase 2.2, chloroplastic OS=Hordeum vulgare... [more]
LOX2_ARATH5.754e-1948.31Lipoxygenase 2, chloroplastic OS=Arabidopsis thali... [more]
LOXA_PHAVU7.515e-1946.43Lipoxygenase 1 OS=Phaseolus vulgaris GN=LOXA PE=3 ... [more]

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Properties
Property NameValue
Genbank descriptionC17 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659078 ID=FE659078; Name=FE659078; organism=Citrus sinensis; type=EST; length=269bp
ACGCTTGGCAATGCCAGCAGGAAATACTTGTGTGGGCCAGCTAAGAAACT
GGTATACTCGGGGTCATTTTCGTCGGGGACTAATCTTCTCATTAGGGGAG
GGCGATTGGGCACATAACCACCATACGGGTACTGTCCAAAATTGAGTGCA
GCGTGCTGTGCAGATGCGAGCCAGATGATCGTAGTTAGGATGGACACCAG
ATCATCACCGTTGATTAATGTGGGCCACCAGCTTTCGTGGCGAAGATCGG
CATGGCCTGTGTTGATGGA
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