FE659078

Overview
NameFE659078
Unique NameFE659078
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length269
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FE659078 vs. ExPASy Swiss-Prot
Match: LOX3_SOYBN (Seed lipoxygenase-3 OS=Glycine max GN=LOX1.3 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.815e-19
Identity = 39/83 (46.99%), Postives = 51/83 (61.45%), Query Frame = -1
Query:   18 INTGHADLRHESWWPTLINGDDLVSILTTIIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLVPDENDPEYTSFLAGPHKYFL 266
            +  GH D ++E WWP +   ++LV     IIW ASA HAA+NFGQYPYGG + NRP L RR +P++   EY      P K +L
Sbjct:  672 VEVGHGDKKNEPWWPKMQTREELVEACAIIIWTASALHAAVNFGQYPYGGLILNRPTLSRRFMPEKGSAEYEELRKNPQKAYL 754          
BLAST of FE659078 vs. ExPASy Swiss-Prot
Match: LOX3_PEA (Seed lipoxygenase-3 OS=Pisum sativum GN=LOX1.3 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 1.674e-18
Identity = 36/83 (43.37%), Postives = 53/83 (63.86%), Query Frame = -1
Query:   18 INTGHADLRHESWWPTLINGDDLVSILTTIIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLVPDENDPEYTSFLAGPHKYFL 266
            +  GH D ++E WWP +   +DL+ + + +IW ASA HAA+NFGQY YGG + NRP L RR +P++   E+   +  P K +L
Sbjct:  676 VEVGHGDKKNEPWWPKMQTREDLIEVCSIVIWTASALHAAVNFGQYSYGGLILNRPTLSRRFMPEKGSAEFEELVKSPQKAYL 758          
BLAST of FE659078 vs. ExPASy Swiss-Prot
Match: LOX2_ORYSJ (Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=LOX1.1 PE=2 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 2.187e-18
Identity = 38/80 (47.50%), Postives = 50/80 (62.50%), Query Frame = -1
Query:   18 GHADLRHESWWPTLINGDDLVSILTTIIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLVPDENDPEYTSFLAGPHKYFL 257
            GH D++  +WWP +    +LV    TIIW+ SA HAA+NFGQYPY GY+PNRP + RR +P+    EY      P K F+
Sbjct:  682 GHGDIKDATWWPEMKTVAELVKACATIIWIGSALHAAVNFGQYPYAGYLPNRPSVSRRPMPEPGTKEYDELARDPEKVFV 761          
BLAST of FE659078 vs. ExPASy Swiss-Prot
Match: LOX1_HORVU (Lipoxygenase 1 OS=Hordeum vulgare GN=LOX1.1 PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 3.730e-18
Identity = 38/85 (44.71%), Postives = 52/85 (61.18%), Query Frame = -1
Query:    3 GHADLRHESWWPTLINGDDLVSILTTIIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLVPDENDPEYTSFLAGPHKYFLLALPS 257
            GH DL+   WWP + +  +L    TTIIW+ SA HAA+NFGQYPY G++PNRP + RR +P+    EY      P + F+  + S
Sbjct:  674 GHGDLKDAPWWPKMQSVPELAKACTTIIWIGSALHAAVNFGQYPYAGFLPNRPTVSRRRMPEPGTEEYAELERDPERAFIHTITS 758          
BLAST of FE659078 vs. ExPASy Swiss-Prot
Match: LOX3_ORYSJ (Putative lipoxygenase 3 OS=Oryza sativa subsp. japonica GN=Os03g0700400 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.085e-17
Identity = 39/85 (45.88%), Postives = 52/85 (61.18%), Query Frame = -1
Query:    3 GHADLRHESWWPTLINGDDLVSILTTIIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLVPDENDPEYTSFLAGPHKYFLLALPS 257
            GH DL+  +WWP +    +L    TTIIW+ASA HAA+NFGQYPY GY+PNRP + RR +P+     Y      P + F+  + S
Sbjct:  678 GHGDLKGAAWWPRMDAVSELRDACTTIIWIASALHAAVNFGQYPYAGYLPNRPTVSRRRMPEPGTEAYGELGRDPERAFIRTITS 762          
BLAST of FE659078 vs. ExPASy Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.417e-17
Identity = 40/86 (46.51%), Postives = 52/86 (60.47%), Query Frame = -1
Query:    3 GHADLRHESWWPTLINGDDLVSILTTIIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLVPDE-NDPEYTSFLAGPHKYFLLALPS 257
            GHAD + E WWP L + ++L   L TI+W+ S  HAA+NFGQYP  GY+PNRP + RR +P E    +   F+  P K  L   PS
Sbjct:  743 GHADKQDEPWWPELDSHENLAQTLATIMWVTSGHHAAVNFGQYPMAGYIPNRPTMARRNMPTEIGGDDMRDFVEAPEKVLLDTFPS 828          
BLAST of FE659078 vs. ExPASy Swiss-Prot
Match: LOX1_LENCU (Lipoxygenase OS=Lens culinaris GN=LOX1.1 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.417e-17
Identity = 36/83 (43.37%), Postives = 52/83 (62.65%), Query Frame = -1
Query:   18 INTGHADLRHESWWPTLINGDDLVSILTTIIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLVPDENDPEYTSFLAGPHKYFL 266
            +  GH DL+  +WW  + N  +L+   + +IW+ASA HAA+NFGQYPYGGY+ NRP   R+ +P++  PEY        K +L
Sbjct:  680 VEVGHGDLKSATWWFKMQNRKELIEACSILIWIASALHAAVNFGQYPYGGYILNRPTKSRKFMPEKGTPEYDDLAKNYEKAYL 762          
BLAST of FE659078 vs. ExPASy Swiss-Prot
Match: LOX4_ORYSJ (Probable lipoxygenase 4 OS=Oryza sativa subsp. japonica GN=Os03g0700700 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 5.386e-17
Identity = 36/74 (48.65%), Postives = 47/74 (63.51%), Query Frame = -1
Query:   36 GHADLRHESWWPTLINGDDLVSILTTIIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLVPDENDPEYTSFLAG 257
            GH DL+ + WWP +    +L    T IIW+ASA HAA+NFGQYPY G++PNRP + RR +P+    EY     G
Sbjct:  685 GHGDLKDQDWWPKMDTVQELTRACTIIIWIASALHAAVNFGQYPYAGFLPNRPTVSRRPMPEPGTEEYAKLERG 758          
BLAST of FE659078 vs. ExPASy Swiss-Prot
Match: LOXB_SOLLC (Lipoxygenase B OS=Solanum lycopersicum GN=LOX1.2 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 9.186e-17
Identity = 39/80 (48.75%), Postives = 47/80 (58.75%), Query Frame = -1
Query:   18 GHADLRHESWWPTLINGDDLVSILTTIIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLVPDENDPEYTSFLAGPHKYFL 257
            GH D + E+WWP L    +L    T IIW+ASA HAAL+FG Y Y GY+PNRP L   L+P+    EY      P K FL
Sbjct:  677 GHGDKKDEAWWPKLQTRQELRDCCTIIIWIASALHAALHFGLYSYAGYLPNRPTLSCNLMPEPGSVEYEELKTNPDKVFL 756          
BLAST of FE659078 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.327e-15
Identity = 38/88 (43.18%), Postives = 52/88 (59.09%), Query Frame = -1
Query:    3 GHADLRHESWWPTLINGDDLVSILTTIIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLVPDENDPEYTS---FLAGPHKYFLLALPS 257
            GH D +   WWP L + + L   LTTI+W+A+A HAA+NFGQY +GGY PNRP + R ++P E   +  +   FL  P +      PS
Sbjct:  756 GHGDKKDAPWWPKLDSPESLAHTLTTIVWVAAAHHAAVNFGQYDFGGYFPNRPSIARTVMPVEEPVDGAAMERFLDNPDQALRECFPS 843          
The following BLAST results are available for this feature:
BLAST of FE659078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
LOX3_SOYBN9.815e-1946.99Seed lipoxygenase-3 OS=Glycine max GN=LOX1.3 PE=1 ... [more]
LOX3_PEA1.674e-1843.37Seed lipoxygenase-3 OS=Pisum sativum GN=LOX1.3 PE=... [more]
LOX2_ORYSJ2.187e-1847.50Lipoxygenase 2 OS=Oryza sativa subsp. japonica GN=... [more]
LOX1_HORVU3.730e-1844.71Lipoxygenase 1 OS=Hordeum vulgare GN=LOX1.1 PE=1 S... [more]
LOX3_ORYSJ1.085e-1745.88Putative lipoxygenase 3 OS=Oryza sativa subsp. jap... [more]
LOX21_HORVU1.417e-1746.51Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare... [more]
LOX1_LENCU1.417e-1743.37Lipoxygenase OS=Lens culinaris GN=LOX1.1 PE=2 SV=1[more]
LOX4_ORYSJ5.386e-1748.65Probable lipoxygenase 4 OS=Oryza sativa subsp. jap... [more]
LOXB_SOLLC9.186e-1748.75Lipoxygenase B OS=Solanum lycopersicum GN=LOX1.2 P... [more]
LOXC2_ORYSJ1.327e-1543.18Probable lipoxygenase 8, chloroplastic OS=Oryza sa... [more]

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Properties
Property NameValue
Genbank descriptionC17 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659078 ID=FE659078; Name=FE659078; organism=Citrus sinensis; type=EST; length=269bp
ACGCTTGGCAATGCCAGCAGGAAATACTTGTGTGGGCCAGCTAAGAAACT
GGTATACTCGGGGTCATTTTCGTCGGGGACTAATCTTCTCATTAGGGGAG
GGCGATTGGGCACATAACCACCATACGGGTACTGTCCAAAATTGAGTGCA
GCGTGCTGTGCAGATGCGAGCCAGATGATCGTAGTTAGGATGGACACCAG
ATCATCACCGTTGATTAATGTGGGCCACCAGCTTTCGTGGCGAAGATCGG
CATGGCCTGTGTTGATGGA
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