FE659078

Overview
NameFE659078
Unique NameFE659078
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length269
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FE659078 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 1.327e-15
Identity = 38/88 (43.18%), Postives = 52/88 (59.09%), Query Frame = -1 
Query:    3 GHADLRHESWWPTLINGDDLVSILTTIIWLASAQHAALNFGQYPYGGYVPNRPPLMRRLVPDENDPEYTS---FLAGPHKYFLLALPS 257
            GH D +   WWP L + + L   LTTI+W+A+A HAA+NFGQY +GGY PNRP + R ++P E   +  +   FL  P +      PS
Sbjct:  739 GHGDKKDAPWWPKLDSPESLAHTLTTIVWVAAAHHAAVNFGQYDFGGYFPNRPSIARTVMPVEEPVDGAAMERFLDNPDQALRECFPS 826
The following BLAST results are available for this feature:
BLAST of FE659078 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
LOXC1_ORYSJ1.327e-1543.18Lipoxygenase 7, chloroplastic OS=Oryza sativa subs... [more]

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Properties
Property NameValue
Genbank descriptionC17 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659078 ID=FE659078; Name=FE659078; organism=Citrus sinensis; type=EST; length=269bp
ACGCTTGGCAATGCCAGCAGGAAATACTTGTGTGGGCCAGCTAAGAAACT
GGTATACTCGGGGTCATTTTCGTCGGGGACTAATCTTCTCATTAGGGGAG
GGCGATTGGGCACATAACCACCATACGGGTACTGTCCAAAATTGAGTGCA
GCGTGCTGTGCAGATGCGAGCCAGATGATCGTAGTTAGGATGGACACCAG
ATCATCACCGTTGATTAATGTGGGCCACCAGCTTTCGTGGCGAAGATCGG
CATGGCCTGTGTTGATGGA
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