EY720771

Overview
NameEY720771
Unique NameEY720771
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720771 vs. ExPASy Swiss-Prot
Match: YFMJ_BACSU (Putative NADP-dependent oxidoreductase yfmJ OS=Bacillus subtilis GN=yfmJ PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.810e-20
Identity = 58/128 (45.31%), Postives = 74/128 (57.81%), Query Frame = 3
Query:   33 PFHTTLESLGMPGVTACAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNRCGFDDAGD*GREPDLDGGGKRCFPQGIDIYFENFGGKMLDALPP--NMRAPGPHCG 410
            P    L  LGM G+TA  GL ++  PK+GE V VS A+GAVG  VGQ AK+ G  VVG AGS EK+D LK    FD+A +     D+    +   P G+D+YF+N GG + DA+    N  A  P CG
Sbjct:  118 PASAYLGILGMTGLTAYFGLLDIGRPKEGETVVVSGAAGAVGSTVGQIAKIKGARVVGIAGSDEKIDYLKQELQFDEAINYKTADDIQKALQNACPDGVDVYFDNVGGPISDAVMNLLNEFARIPVCG 245          
BLAST of EY720771 vs. ExPASy Swiss-Prot
Match: YNCB_ECOLI (Putative NADP-dependent oxidoreductase yncB OS=Escherichia coli (strain K12) GN=yncB PE=3 SV=3)

HSP 1 Score: 98.5969 bits (244), Expect = 4.032e-20
Identity = 62/137 (45.26%), Postives = 77/137 (56.20%), Query Frame = 3
Query:    9 RLATRPDVPFHTTLESLGMPGVTACAGLYEVCSPKKGEYVYVSAASGAVGQLVGQFAKLAGCYVVGSAGSKEKVDLLKNRCGFDDAGD*GREPDLDGGGKRCFPQGIDIYFENFGGKMLDALPP--NMRAPGPHCGV 413
            +L   P  P   +L  LGMPG TA  GL ++  PK+GE + V+AA+G VG  VGQ  KL GC VVG AG  EK        GFD   D   +   +   K C P+GIDIY+EN GGK+ DA+ P  N  A  P CG+
Sbjct:  115 KLGDHPQNP-SWSLGVLGMPGFTAYMGLLDIGQPKEGETLVVAAATGPVGATVGQIGKLKGCRVVGVAGGAEKCRHATEVLGFDVCLDHHADDFAEQLAKAC-PKGIDIYYENVGGKVFDAVLPLLNTSARIPVCGL 249          
BLAST of EY720771 vs. ExPASy Swiss-Prot
Match: PTGR2_PONAB (Prostaglandin reductase 2 OS=Pongo abelii GN=PTGR2 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 7.621e-11
Identity = 43/116 (37.07%), Postives = 64/116 (55.17%), Query Frame = 3
Query:   48 LESLGMPGVTACAGLYEVCSPKKG--EYVYVSAASGAVGQLVGQFAKLAGCY-VVGSAGSKEKVDLLKNRCGFDDAGD*GREPDLDGGGKRCFPQGIDIYFENFGGKMLDALPPNM 386
            L ++GMPG+T+  G+ E      G  + + VS A+GA G + GQ   L GC  VVG  G+ EK  LL +  GFD A +  ++   +   + C P G+D+YF+N GG + D +   M
Sbjct:  130 LGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHLLGCSRVVGICGTHEKCVLLTSELGFDAAINYKKDNVAEQLRESC-PAGVDVYFDNVGGNISDTVISQM 244          
The following BLAST results are available for this feature:
BLAST of EY720771 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
YFMJ_BACSU1.810e-2045.31Putative NADP-dependent oxidoreductase yfmJ OS=Bac... [more]
YNCB_ECOLI4.032e-2045.26Putative NADP-dependent oxidoreductase yncB OS=Esc... [more]
PTGR2_PONAB7.621e-1137.07Prostaglandin reductase 2 OS=Pongo abelii GN=PTGR2... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-014-A12-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720771 ID=EY720771; Name=EY720771; organism=Citrus sinensis; type=EST; length=772bp
GAACCGCTAGGTTGGCCACTCGTCCGGATGTGCCCTTTCATACTACACTG
GAATCACTTGGTATGCCTGGTGTGACTGCATGCGCGGGTTTATACGAAGT
TTGCTCTCCGAAGAAAGGTGAGTACGTCTATGTATCTGCAGCATCTGGAG
CTGTTGGTCAGCTTGTTGGCCAATTTGCGAAATTGGCTGGTTGCTATGTT
GTGGGAAGTGCTGGAAGCAAAGAAAAGGTCGATTTGTTGAAGAACAGGTG
TGGATTCGATGATGCTGGGGACTAGGGGCGGGAGCCAGACTTGGATGGCG
GAGGCAAAAGATGCTTCCCTCAAGGAATCGACATATATTTCGAAAACTTT
GGGGGAAAGATGCTGGACGCACTGCCACCCAACATGAGGGCTCCGGGGCC
GCATTGCGGTGTGCGGTATGATCTCGCAGCACACCCTGTACAAACCTGAA
GGCGTAACCCACTTACATCCACGGAGCGGAAGGGGGCTGCGCCGTGCCGG
GTGGCAGACAGGTGAGTAATGAGAGGGCTCTGCCAGGTGGTGGGGACCTG
CTGCTCCTGCCGTCCGACAAGACCTGTTGTCTATGTGGGCCACACACGCC
ACGGAGAGGAGAAAGGCCCGACGGCGAGGCGAGGGTGCTCATGGAGGCAC
AACGCCTGGGTACGCACGATTGACAGCGGTGCTAAGAGACCCTCGGTGAG
AGTGGGCGGCGCCTCGCGGCCAGGAAACAGGAGCCGGGCCGCACGCGGTG
TGCTGTGTGTATATATACCCCG
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