EY720722

Overview
NameEY720722
Unique NameEY720722
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720722 vs. ExPASy Swiss-Prot
Match: GLNA_BOVIN (Glutamine synthetase OS=Bos taurus GN=GLUL PE=2 SV=4)

HSP 1 Score: 102.449 bits (254), Expect = 3.490e-21
Identity = 53/96 (55.21%), Postives = 65/96 (67.71%), Query Frame = 3
Query:   15 GFEVIKKAIDKLGLRHSEHIAAY----GEGNERRLTGKHETADINTFKWGVANRGASIRVGRHTHKEGKGYFEDRRPAPNMDPYVVTSMIAETTML 290
            G + I++AI+KL  RH  HI AY    G  N RRLTG HET++IN F  GVANRGASIR+ R   +E KGYFEDRRP+ N DP+ VT  +  T +L
Sbjct:  266 GLKYIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVANRGASIRIPRTVGQEKKGYFEDRRPSANCDPFAVTEALIRTCLL 361          
BLAST of EY720722 vs. ExPASy Swiss-Prot
Match: GLNA2_DROME (Glutamine synthetase 2 cytoplasmic OS=Drosophila melanogaster GN=Gs2 PE=2 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 3.490e-21
Identity = 53/96 (55.21%), Postives = 61/96 (63.54%), Query Frame = 3
Query:   15 GFEVIKKAIDKLGLRHSEHIAAY----GEGNERRLTGKHETADINTFKWGVANRGASIRVGRHTHKEGKGYFEDRRPAPNMDPYVVTSMIAETTML 290
            G   I+KA+ KL   H  HI AY    G+ N RRLTGKHET+ IN F  GVANRG SIR+ R  + +GKGYFEDRRP+ N DPY V   I  T  L
Sbjct:  272 GIRDIEKAVAKLSKCHERHIRAYDPKQGQDNARRLTGKHETSSINDFSAGVANRGCSIRIPRGVNDDGKGYFEDRRPSSNCDPYSVVEAILRTICL 367          
BLAST of EY720722 vs. ExPASy Swiss-Prot
Match: GLNA_PIG (Glutamine synthetase OS=Sus scrofa GN=GLUL PE=2 SV=3)

HSP 1 Score: 101.679 bits (252), Expect = 5.953e-21
Identity = 53/96 (55.21%), Postives = 65/96 (67.71%), Query Frame = 3
Query:   15 GFEVIKKAIDKLGLRHSEHIAAY----GEGNERRLTGKHETADINTFKWGVANRGASIRVGRHTHKEGKGYFEDRRPAPNMDPYVVTSMIAETTML 290
            G + I++AI+KL  RH  HI AY    G  N RRLTG HET++IN F  GVANRGASIR+ R   +E KGYFEDRRP+ N DP+ VT  +  T +L
Sbjct:  266 GLKYIEEAIEKLSKRHQYHIRAYDPKGGLDNTRRLTGFHETSNINDFSAGVANRGASIRIPRTGGQEKKGYFEDRRPSANCDPFAVTEALIRTCLL 361          
BLAST of EY720722 vs. ExPASy Swiss-Prot
Match: GLNA1_DROME (Glutamine synthetase 1, mitochondrial OS=Drosophila melanogaster GN=Gs1 PE=2 SV=3)

HSP 1 Score: 100.908 bits (250), Expect = 1.015e-20
Identity = 50/96 (52.08%), Postives = 62/96 (64.58%), Query Frame = 3
Query:   15 GFEVIKKAIDKLGLRHSEHIAAY----GEGNERRLTGKHETADINTFKWGVANRGASIRVGRHTHKEGKGYFEDRRPAPNMDPYVVTSMIAETTML 290
            G + I++AI+KL  RH  HI AY    G+ NERRL G+ ET+ I+ F WGVANR  S+RV R     GKGY EDRRP+ N DPY V + I  T +L
Sbjct:  302 GIKAIEEAIEKLSKRHERHIKAYDPKEGKDNERRLVGRLETSSIDKFSWGVANRAVSVRVPRGVATAGKGYLEDRRPSSNCDPYAVCNAIVRTCLL 397          
BLAST of EY720722 vs. ExPASy Swiss-Prot
Match: GLNA_CANFA (Glutamine synthetase OS=Canis familiaris GN=GLUL PE=1 SV=3)

HSP 1 Score: 100.523 bits (249), Expect = 1.326e-20
Identity = 52/96 (54.17%), Postives = 65/96 (67.71%), Query Frame = 3
Query:   15 GFEVIKKAIDKLGLRHSEHIAAY----GEGNERRLTGKHETADINTFKWGVANRGASIRVGRHTHKEGKGYFEDRRPAPNMDPYVVTSMIAETTML 290
            G + I+++I+KL  RH  HI AY    G  N RRLTG HET++IN F  GVANRGASIR+ R   +E KGYFEDRRP+ N DP+ VT  +  T +L
Sbjct:  266 GLKYIEESIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVANRGASIRIPRTVGQEKKGYFEDRRPSANCDPFSVTEALIRTCLL 361          
BLAST of EY720722 vs. ExPASy Swiss-Prot
Match: GLNA_MACFA (Glutamine synthetase OS=Macaca fascicularis GN=GLUL PE=2 SV=3)

HSP 1 Score: 99.3673 bits (246), Expect = 2.954e-20
Identity = 52/96 (54.17%), Postives = 64/96 (66.67%), Query Frame = 3
Query:   15 GFEVIKKAIDKLGLRHSEHIAAY----GEGNERRLTGKHETADINTFKWGVANRGASIRVGRHTHKEGKGYFEDRRPAPNMDPYVVTSMIAETTML 290
            G + I++AI+KL  RH  HI AY    G  N RRLTG HET++IN F  GVANR ASIR+ R   +E KGYFEDRRP+ N DP+ VT  +  T +L
Sbjct:  267 GLKYIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVANRSASIRIPRTVGQEKKGYFEDRRPSANCDPFSVTEALIRTCLL 362          
BLAST of EY720722 vs. ExPASy Swiss-Prot
Match: GLNA_HUMAN (Glutamine synthetase OS=Homo sapiens GN=GLUL PE=1 SV=4)

HSP 1 Score: 99.3673 bits (246), Expect = 2.954e-20
Identity = 52/96 (54.17%), Postives = 64/96 (66.67%), Query Frame = 3
Query:   15 GFEVIKKAIDKLGLRHSEHIAAY----GEGNERRLTGKHETADINTFKWGVANRGASIRVGRHTHKEGKGYFEDRRPAPNMDPYVVTSMIAETTML 290
            G + I++AI+KL  RH  HI AY    G  N RRLTG HET++IN F  GVANR ASIR+ R   +E KGYFEDRRP+ N DP+ VT  +  T +L
Sbjct:  266 GLKYIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSNINDFSAGVANRSASIRIPRTVGQEKKGYFEDRRPSANCDPFSVTEALIRTCLL 361          
BLAST of EY720722 vs. ExPASy Swiss-Prot
Match: GLNA_CHICK (Glutamine synthetase OS=Gallus gallus GN=GLUL PE=2 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 3.858e-20
Identity = 52/96 (54.17%), Postives = 63/96 (65.62%), Query Frame = 3
Query:   15 GFEVIKKAIDKLGLRHSEHIAAY----GEGNERRLTGKHETADINTFKWGVANRGASIRVGRHTHKEGKGYFEDRRPAPNMDPYVVTSMIAETTML 290
            G + I++AI+KL  RH  HI AY    G  N RRLTG HET+ I+ F  GVANRGASIR+ R+   E KGYFEDR P+ N DPY VT  +  T +L
Sbjct:  266 GLKHIEEAIEKLSKRHQYHIRAYDPKGGLDNARRLTGFHETSSIHEFSAGVANRGASIRIPRNVGHEKKGYFEDRGPSANCDPYAVTEALVRTCLL 361          
BLAST of EY720722 vs. ExPASy Swiss-Prot
Match: GLNA2_FRAAL (Glutamine synthetase 2 OS=Frankia alni GN=glnII PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.582e-20
Identity = 45/92 (48.91%), Postives = 62/92 (67.39%), Query Frame = 3
Query:    6 TRPGFEVIKKAIDKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRHTHKEGKGYFEDRRPAPNMDPYVVTSMIAET 281
            T  G++ I    + LG R +EH+  YG+G E RLTGKHETA  N + WG ++RGAS+R+     K  KG+ EDRRP  NMDPY+VT+++ +T
Sbjct:  234 TMEGWDAIVTCCEALGTRVTEHVTHYGKGIEDRLTGKHETAPWNKYSWGASDRGASVRIPWAVEKAKKGWLEDRRPNANMDPYLVTALMIDT 325          
BLAST of EY720722 vs. ExPASy Swiss-Prot
Match: GLNA3_LUPAN (Glutamine synthetase nodule isozyme (Fragment) OS=Lupinus angustifolius PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 8.596e-20
Identity = 45/54 (83.33%), Postives = 51/54 (94.44%), Query Frame = 3
Query:   15 GFEVIKKAIDKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASI 176
            G+EVIK+AI+KL  RH+EHIAAYGEGNERRLTG+HETADI+TF WGVANRGASI
Sbjct:  262 GYEVIKQAIEKLEKRHNEHIAAYGEGNERRLTGRHETADISTFSWGVANRGASI 315          
The following BLAST results are available for this feature:
BLAST of EY720722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GLNA_BOVIN3.490e-2155.21Glutamine synthetase OS=Bos taurus GN=GLUL PE=2 SV... [more]
GLNA2_DROME3.490e-2155.21Glutamine synthetase 2 cytoplasmic OS=Drosophila m... [more]
GLNA_PIG5.953e-2155.21Glutamine synthetase OS=Sus scrofa GN=GLUL PE=2 SV... [more]
GLNA1_DROME1.015e-2052.08Glutamine synthetase 1, mitochondrial OS=Drosophil... [more]
GLNA_CANFA1.326e-2054.17Glutamine synthetase OS=Canis familiaris GN=GLUL P... [more]
GLNA_MACFA2.954e-2054.17Glutamine synthetase OS=Macaca fascicularis GN=GLU... [more]
GLNA_HUMAN2.954e-2054.17Glutamine synthetase OS=Homo sapiens GN=GLUL PE=1 ... [more]
GLNA_CHICK3.858e-2054.17Glutamine synthetase OS=Gallus gallus GN=GLUL PE=2... [more]
GLNA2_FRAAL6.582e-2048.91Glutamine synthetase 2 OS=Frankia alni GN=glnII PE... [more]
GLNA3_LUPAN8.596e-2083.33Glutamine synthetase nodule isozyme (Fragment) OS=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-013-D12-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720722 ID=EY720722; Name=EY720722; organism=Citrus sinensis; type=EST; length=888bp
CACCCACGCGTCCGGGCTTTGAGGTTATTAAGAAAGCCATCGACAAACTT
GGACTGAGGCACAGTGAGCACATTGCCGCATATGGTGAAGGCAATGAACG
CCGACTCACTGGCAAACATGAAACAGCTGACATCAACACTTTCAAATGGG
GTGTTGCTAACCGTGGGGCATCAATCCGTGTTGGACGACACACACACAAA
GAAGGAAAGGGTTACTTTGAGGACAGGAGACCTGCTCCTAACATGGATCC
ATATGTTGTCACCTCCATGATTGCAGAAACCACTATGCTGTGGAACCCAT
GAATGCTCCTCTAGCACACCTTGAAATATCCTGTTTGATCTGCTGGCTTC
ACTCAAGATTCACGAGTTCCCCACAGAATCGTGTCCTCCTCAAGGATGCT
CCAATACCACTAGTTCCCCTCTTGTCCTGTTCCCATCCCTGCCCCCGGTT
ATCGCGCAGGGGGTCCCACGCCGCCAGCCCGTCACACCGGGACGAATAAC
GGGCCCGCCCAAGTTACGATGATTGGCGGACGGCCCACACCCCACCCACA
AACCCCAGTCTCCCCCCACAACAACCCACCCCGCGTCCCGGCGCCAAAAC
CCACTACCCGAGGGCGGGCCCTCACCCACCTCCACTCAGGCGCACCCCGC
CCCCGCCCACCCCCACCCATCCCTTACGCGCACCCCAAATCCCCTCCCCC
GGCCGACGCTGCTGGGCGGACCACAACGCGGAGACCCCCGGTACCGTCGG
TCCAGACCCGGACCGGCCCACCCCGCGCACACGCGCACACCCAAATATAG
CATCACCCGCCCGCACAATTTCACCAACACCTACACCGCCCACACAACCC
CCCCCCAAGGGAAAGCACACCCCCGATGCCCACTCTCG
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