EY720690

Overview
NameEY720690
Unique NameEY720690
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length900
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720690 vs. ExPASy Swiss-Prot
Match: ACP_ALCBS (Acyl carrier protein OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=acpP PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.206e-14
Identity = 40/75 (53.33%), Postives = 50/75 (66.67%), Query Frame = 3
Query:  189 SEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKINTINMAVDFIASH 413
            S + +RV  ++     V P  V   A F  DLG DSLDTVE+VMALEEEF  EIPD EA+KI+T+  AVD+I +H
Sbjct:    2 SSIEERVNKIIVEQLGVKPEDVKSEASFVEDLGADSLDTVELVMALEEEFETEIPDEEAEKISTVQSAVDYIKAH 76          
BLAST of EY720690 vs. ExPASy Swiss-Prot
Match: ACP_VIBVY (Acyl carrier protein OS=Vibrio vulnificus (strain YJ016) GN=acpP PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.411e-14
Identity = 39/77 (50.65%), Postives = 53/77 (68.83%), Query Frame = 3
Query:  189 SEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKINTINMAVDFIASHPQ 419
            S + +RV  ++     VD S+V   A F +DLG DSLDTVE+VMALEEEF  EIPD EA+KI T+  A+D++ ++ Q
Sbjct:    2 SNLEERVKKIIVEQLGVDESEVKNEASFVDDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYVTANAQ 78          
BLAST of EY720690 vs. ExPASy Swiss-Prot
Match: ACP_VIBVU (Acyl carrier protein OS=Vibrio vulnificus GN=acpP PE=3 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 9.411e-14
Identity = 39/77 (50.65%), Postives = 53/77 (68.83%), Query Frame = 3
Query:  189 SEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKINTINMAVDFIASHPQ 419
            S + +RV  ++     VD S+V   A F +DLG DSLDTVE+VMALEEEF  EIPD EA+KI T+  A+D++ ++ Q
Sbjct:    2 SNLEERVKKIIVEQLGVDESEVKNEASFVDDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYVTANAQ 78          
BLAST of EY720690 vs. ExPASy Swiss-Prot
Match: ACP_PSEP1 (Acyl carrier protein OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=acpP PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.411e-14
Identity = 38/75 (50.67%), Postives = 51/75 (68.00%), Query Frame = 3
Query:  189 SEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKINTINMAVDFIASH 413
            S + +RV  +V     V   +VT+   F +DLG DSLDTVE+VMALEEEF  EIPD EA+KI T+  A+D++ +H
Sbjct:    2 STIEERVKKIVAEQLGVKEEEVTIEKSFVDDLGADSLDTVELVMALEEEFETEIPDEEAEKITTVQAAIDYVKAH 76          
BLAST of EY720690 vs. ExPASy Swiss-Prot
Match: ACP_PSEMY (Acyl carrier protein OS=Pseudomonas mendocina (strain ymp) GN=acpP PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.411e-14
Identity = 39/77 (50.65%), Postives = 52/77 (67.53%), Query Frame = 3
Query:  189 SEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKINTINMAVDFIASHPQ 419
            S + +RV  +V     V   +VT +A F  DLG DSLDTVE+VMALEEEF  EIPD +A+KI T+  A+D++ +H Q
Sbjct:    2 STIEERVKKIVAEQLGVKEEEVTNSASFVEDLGADSLDTVELVMALEEEFETEIPDEQAEKITTVQEAIDYVTAHAQ 78          
BLAST of EY720690 vs. ExPASy Swiss-Prot
Match: ACP_PECCP (Acyl carrier protein OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=acpP PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.411e-14
Identity = 40/77 (51.95%), Postives = 52/77 (67.53%), Query Frame = 3
Query:  189 SEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKINTINMAVDFIASHPQ 419
            S + +RV  ++     V   +V  NA F +DLG DSLDTVE+VMALEEEF  EIPD EA+KI T+  A+DFI ++ Q
Sbjct:    2 STIEERVKKIIVEQLGVKQEEVVNNASFVDDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDFIQANQQ 78          
BLAST of EY720690 vs. ExPASy Swiss-Prot
Match: ACP_GRABC (Acyl carrier protein OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=acpP PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.411e-14
Identity = 41/78 (52.56%), Postives = 53/78 (67.95%), Query Frame = 3
Query:  189 SEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKINTINMAVDFIASHPQA 422
            SEV D+V  +V     V+ SKVT  A F +DLG DSLDTVE+VMA EE FG EIP++ A+KI+T+  AV++I     A
Sbjct:    2 SEVADKVKKIVVEHLGVEESKVTPEASFIDDLGADSLDTVELVMAFEEAFGVEIPEDAAEKISTVKDAVEYIEKQKAA 79          
BLAST of EY720690 vs. ExPASy Swiss-Prot
Match: ACP_ERWCT (Acyl carrier protein OS=Erwinia carotovora subsp. atroseptica GN=acpP PE=3 SV=3)

HSP 1 Score: 77.7962 bits (190), Expect = 9.411e-14
Identity = 40/77 (51.95%), Postives = 52/77 (67.53%), Query Frame = 3
Query:  189 SEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKINTINMAVDFIASHPQ 419
            S + +RV  ++     V   +V  NA F +DLG DSLDTVE+VMALEEEF  EIPD EA+KI T+  A+DFI ++ Q
Sbjct:    2 STIEERVKKIIVEQLGVKQEEVVNNASFVDDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDFIQANQQ 78          
BLAST of EY720690 vs. ExPASy Swiss-Prot
Match: ACP_CYAA5 (Acyl carrier protein OS=Cyanothece sp. (strain ATCC 51142) GN=acpP PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.411e-14
Identity = 42/78 (53.85%), Postives = 53/78 (67.95%), Query Frame = 3
Query:  192 EVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKINTINMAVDFIASHPQAK 425
            E+ ++V S+V    +V+   VT  A+F NDLG DSLDTVE+VMALEEEF  EIPD  A+ I T+  AVD+I    QAK
Sbjct:    4 EIFEKVKSIVVEQLEVEEDTVTPEANFANDLGADSLDTVELVMALEEEFDIEIPDEAAENIGTVQAAVDYIEKE-QAK 80          
BLAST of EY720690 vs. ExPASy Swiss-Prot
Match: ACP_ACIBL (Acyl carrier protein OS=Acidobacteria bacterium (strain Ellin345) GN=acpP PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.411e-14
Identity = 42/82 (51.22%), Postives = 55/82 (67.07%), Query Frame = 3
Query:  189 SEVTDRVISVVKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKINTINMAVDFIASHPQAK*GK 434
            + V ++V  ++     VD  +VT NA F +DLG DSLDTVE+VMA EE F  EIPD +A+KI T+  AVD+I +H  AK GK
Sbjct:    2 ASVEEKVKQIIVEQLGVDEGEVTPNASFVDDLGADSLDTVELVMAFEEAFEIEIPDEDAEKIRTVKDAVDYITAH--AKGGK 81          
The following BLAST results are available for this feature:
BLAST of EY720690 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 380
Match NameE-valueIdentityDescription
ACP_ALCBS7.206e-1453.33Acyl carrier protein OS=Alcanivorax borkumensis (s... [more]
ACP_VIBVY9.411e-1450.65Acyl carrier protein OS=Vibrio vulnificus (strain ... [more]
ACP_VIBVU9.411e-1450.65Acyl carrier protein OS=Vibrio vulnificus GN=acpP ... [more]
ACP_PSEP19.411e-1450.67Acyl carrier protein OS=Pseudomonas putida (strain... [more]
ACP_PSEMY9.411e-1450.65Acyl carrier protein OS=Pseudomonas mendocina (str... [more]
ACP_PECCP9.411e-1451.95Acyl carrier protein OS=Pectobacterium carotovorum... [more]
ACP_GRABC9.411e-1452.56Acyl carrier protein OS=Granulibacter bethesdensis... [more]
ACP_ERWCT9.411e-1451.95Acyl carrier protein OS=Erwinia carotovora subsp. ... [more]
ACP_CYAA59.411e-1453.85Acyl carrier protein OS=Cyanothece sp. (strain ATC... [more]
ACP_ACIBL9.411e-1451.22Acyl carrier protein OS=Acidobacteria bacterium (s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-013-A07-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720690 ID=EY720690; Name=EY720690; organism=Citrus sinensis; type=EST; length=900bp
GGTCCGGAATCCCCTAGGTCACCACGCGTCCGCAGATACTGAAAATGGCG
GCGGCGAGAGGTGCCTTGCTAAAGTACCTGAGAGTGAACGTGGCCACCGT
GCAACGAAACCCTAGCCCCTTTTCTCTCTCATTCAACTCCATACGCCGCT
GTTTCGCGGAAGAGGTCAGGGGCTCTTTCCTCGACAAATCTGAAGTCACC
GATCGCGTCATTTCCGTCGTTAAAAACTTCCAGAAAGTTGATCCTTCCAA
GGTTACGGTTAATGCCCATTTCCAGAATGATCTTGGGTTGGATAGTTTGG
ACACTGTGGAGGTCGTGATGGCACTTGAAGAAGAATTCGGATTCGAGATC
CCAGATAATGAGGCAGACAAGATCAATACCATCAATATGGCTGTCGATTT
CATTGCTTCTCATCCTCAGGCTAAGTAGGGGAAACTATGAAGCCCTACGA
TGCTATTTTCACTCTTTTGATGTTCAGAATTAGCAGCAGCATTAGAATTC
TCTTATCCCGGGTACTANAATTTTTGTTCCCTTAAAAACGAGTAAACTTT
AAAAAGCTTTCTGGTTTTCCGACCCCATTTGAACTCTGCTTGAAGAGTAT
TGTTTTTGGGAGACTTGCCGCGTCNAAAATGCTTTCCATTAAATGGGAAG
ATGGGAATGGTCTGGTATTTCTTCACTACTCATCATATATGTTCTTTCAT
TTTAATAAAGATCATGTAGGAGACATTTGTTGTTTGGAATTTTCCTTAAC
TTGGTAAGTTATATCTATGTGATATGTCCCATGCAATCAAAAATCTGAAG
TGTTTAAACTTATGGGAATAAACATAAATCTTATTGCCCCCGCCCCCGGC
CGCCCCCACACGGGCGAAGGGGGGGGCGCCCCAAAAGAACCAACCTTGAT
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