EY720674

Overview
NameEY720674
Unique NameEY720674
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720674 vs. ExPASy Swiss-Prot
Match: GCSP_NOSP7 (Glycine dehydrogenase [decarboxylating] OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=gcvP PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.463e-54
Identity = 116/221 (52.49%), Postives = 148/221 (66.97%), Query Frame = 1
Query:    1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPAMSWPVPGTLMIEPTESESXGIVGQVL*CSHLHQRTN*PIDNGKGHIHKNVLKGAPH-PPSLVSGKAWN*PYSPEYRNYAGSWIRFWKFLAANGSLDNLFWFRH 660
            LP HPVV+   I    +   +G +AAAPWGSA IL IS+ YIAMMG+ GLT+A+K+AILNANY+AK+LE +YP+L++G NG VAHE I+DLR LK +A IE +DVAKRLMDYGFH P +SWPV GT+M+EPTESES   + +        ++    I+ GK     NVLK APH   SL++G+ W  PYS E   Y   W R +KF  A G +D  F  R+
Sbjct:  750 LPGHPVVT---INDSTQHSHIGAVAAAPWGSASILVISWMYIAMMGADGLTQATKVAILNANYIAKKLESYYPVLYQGKNGLVAHECILDLRSLKKSAAIEIDDVAKRLMDYGFHAPTVSWPVGGTIMVEPTESESKQELDRFCDALIAIRQEIAEIEVGKVDAQDNVLKNAPHTAESLITGE-WQHPYSREQAAYPAPWTREYKFWPAVGRIDAAFGDRN 966          
BLAST of EY720674 vs. ExPASy Swiss-Prot
Match: GCSP_CHICK (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Gallus gallus GN=GLDC PE=1 SV=2)

HSP 1 Score: 209.534 bits (532), Expect = 1.239e-53
Identity = 114/225 (50.67%), Postives = 146/225 (64.89%), Query Frame = 1
Query:    1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPAMSWPVPGTLMIEPTESESXGIVGQVL*CSHLHQRTN*PIDNGKGHIHKNVLKGAPHPPSLVSGKAWN*PYSPEYRNYAGSWI----RFWKFLAANGSLDNLFWFRHL 663
            LP+HPV+    I   + + PLGT++AAPWGS+ ILPIS+ YI  MG+KGL  AS+IAILNANYMAKRLEKHY ILFRGV G VAHEFI+D R  K TA IE  D+AKRL DYGFH P MSWPV GTLMIEPTESE  G + +        ++    I+ G+     N LK +PH  + V+   W+ PYS E   +   ++    +FW  +A    +D+++  +HL
Sbjct:  764 LPTHPVIK---IQTDKDACPLGTVSAAPWGSSAILPISWVYIKTMGAKGLKHASEIAILNANYMAKRLEKHYKILFRGVRGYVAHEFILDTRPFKKTANIEAVDLAKRLQDYGFHAPTMSWPVAGTLMIEPTESEDKGELDRFCDAMISIRQEIADIEEGRMDPQVNPLKMSPHTLNCVTSSKWDRPYSREVAAFPLPFVKPESKFWPTIA---RIDDIYGDQHL 982          
BLAST of EY720674 vs. ExPASy Swiss-Prot
Match: GCSP_MOUSE (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Mus musculus GN=Gldc PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.618e-53
Identity = 113/225 (50.22%), Postives = 146/225 (64.89%), Query Frame = 1
Query:    1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPAMSWPVPGTLMIEPTESESXGIVGQVL*CSHLHQRTN*PIDNGKGHIHKNVLKGAPHPPSLVSGKAWN*PYSPEYRNYAGSWI----RFWKFLAANGSLDNLFWFRHL 663
            LPSHPV+S   I   E + P+GT++AAPWGS+ ILPIS+ YI MMG KGL EA++IAILNANYMAKRLEKHY +LFRG  G VAHEFI+D R  K +A +E  DVAKRL DYGFH P MSWPV GTLMIEPTESE    + +        ++    I+ G+     N LK +PH  + V+   W+ PYS E   +   ++    +FW  +A    +D+++  +HL
Sbjct:  785 LPSHPVIS---IKPTEGTWPVGTVSAAPWGSSSILPISWAYIKMMGGKGLKEATEIAILNANYMAKRLEKHYRVLFRGARGYVAHEFILDTRPFKKSANVEAVDVAKRLQDYGFHAPTMSWPVAGTLMIEPTESEDKAELDRFCDAMISIRQEIADIEEGRIDPRVNPLKMSPHSLTCVTSSCWDRPYSREVAAFPLPFVKPENKFWPTIA---RIDDIYGDQHL 1003          
BLAST of EY720674 vs. ExPASy Swiss-Prot
Match: GCSP_ANASP (Glycine dehydrogenase [decarboxylating] OS=Anabaena sp. (strain PCC 7120) GN=gcvP PE=3 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 6.147e-53
Identity = 112/221 (50.68%), Postives = 145/221 (65.61%), Query Frame = 1
Query:    1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPAMSWPVPGTLMIEPTESESXGIVGQVL*CSHLHQRTN*PIDNGKGHIHKNVLKGAPHP-PSLVSGKAWN*PYSPEYRNYAGSWIRFWKFLAANGSLDNLFWFRH 660
            LP HPV+ +G  P     Q +G +AAAPWGSA IL IS+ YI MMG+ GLT+A+K+AILNANY+AK+L  +YP+L++G NG VAHE I+DLR LK +A IE +D+AKRL+DYGFH P +SWPV GT+M+EPTESES   + +        ++    I+ GK  I  N LK APH   SL+ G+ W  PYS E   Y   W R  KF  + G +D  F  R+
Sbjct:  757 LPGHPVLESGKNP-----QNIGAVAAAPWGSASILVISWMYIVMMGADGLTQATKVAILNANYIAKKLAAYYPVLYKGQNGLVAHECILDLRALKKSANIEIDDIAKRLIDYGFHAPTVSWPVAGTIMVEPTESESQAELDRFCEALIAIRQEIADIEAGKVDIQDNSLKNAPHTVESLIVGE-WPHPYSREQAAYPAPWTREHKFWPSVGRIDAAFGDRN 971          
BLAST of EY720674 vs. ExPASy Swiss-Prot
Match: GCSP_SYNY3 (Glycine dehydrogenase [decarboxylating] OS=Synechocystis sp. (strain PCC 6803) GN=gcvP PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 6.796e-52
Identity = 116/222 (52.25%), Postives = 148/222 (66.67%), Query Frame = 1
Query:    1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPAMSWPVPGTLMIEPTESESXGIVGQVL*CSHLHQRTN*PIDNGKGHIHKNVLKGAPH-PPSLVSGKAWN*PYSPEYRNYAGSWIRFWKFLAANGSLDNLFWFRHL 663
            LP   + ST  + A ++S  +G I+AAP+GSA IL IS+ YIAMMG +GLT+A+++AIL+ANYMAKRLE +YPILFRG N  VAHE I+DLR LK  A IE EDVAKRLMD+GFH P +SWPV GT+M+EPTESES G + +         +    I +G+     N LK APH   SL+ G+ WN PYS E   Y   W + +KF  A G ++N +  RHL
Sbjct:  752 LPRTSLNSTAELQAEDQS--IGMISAAPYGSASILVISWMYIAMMGPQGLTKATEVAILSANYMAKRLENYYPILFRGNNELVAHECILDLRPLKKQAAIEVEDVAKRLMDFGFHAPTVSWPVLGTMMVEPTESESLGELDRFCDAMIAIYQEAQAITHGEIDPADNPLKNAPHTAQSLICGE-WNHPYSQEEAAYPAPWTKQFKFWPAVGRINNTYGDRHL 970          
BLAST of EY720674 vs. ExPASy Swiss-Prot
Match: GCSP_HUMAN (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Homo sapiens GN=GLDC PE=1 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 1.282e-50
Identity = 108/225 (48.00%), Postives = 143/225 (63.56%), Query Frame = 1
Query:    1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPAMSWPVPGTLMIEPTESESXGIVGQVL*CSHLHQRTN*PIDNGKGHIHKNVLKGAPHPPSLVSGKAWN*PYSPEYRNYAGSWI----RFWKFLAANGSLDNLFWFRHL 663
            LP+HPV+S   +   E + P+GT++AAPWGS+ ILPIS+ YI MMG KGL +A++ AILNANYMAKRLE HY ILFRG  G V HEFI+D R  K +A IE  DVAKRL DYGFH P MSWPV GTLM+EPTESE    + +        ++    I+ G+     N LK +PH  + V+   W+ PYS E   +   ++    +FW  +A    +D+++  +HL
Sbjct:  780 LPNHPVIS---LKRNEDACPVGTVSAAPWGSSSILPISWAYIKMMGGKGLKQATETAILNANYMAKRLETHYRILFRGARGYVGHEFILDTRPFKKSANIEAVDVAKRLQDYGFHAPTMSWPVAGTLMVEPTESEDKAELDRFCDAMISIRQEIADIEEGRIDPRVNPLKMSPHSLTCVTSSHWDRPYSREVAAFPLPFVKPENKFWPTIA---RIDDIYGDQHL 998          
BLAST of EY720674 vs. ExPASy Swiss-Prot
Match: GCSP_BDEBA (Glycine dehydrogenase [decarboxylating] OS=Bdellovibrio bacteriovorus GN=gcvP PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.282e-50
Identity = 104/221 (47.06%), Postives = 140/221 (63.35%), Query Frame = 1
Query:    1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPAMSWPVPGTLMIEPTESESXGIVGQVL*CSHLHQRTN*PIDNGKGHIHKNVLKGAPHPPSLVSGKAWN*PYSPEYRNYAGSWIRFWKFLAANGSLDNLFWFRHL 663
            LP H +V   G      +  +    +APWGSA ILPIS+ YI MMG++GL +A+ ++IL+ANY+AK+LE HYP+L++G NG VAHE IVD+R +K T+GI+  DVAKRLMD+GFH P MS+PV GTLMIEPTESES   + + +      ++    ++ GK     N LK APH   ++    WN PYS E   Y   W+R  KF    G +DN +  R+L
Sbjct:  731 LPKHSLVPEAG-----PANGISATTSAPWGSASILPISWAYITMMGAQGLRKATLVSILSANYIAKKLEAHYPVLYKGKNGLVAHECIVDVREIKKTSGIDVTDVAKRLMDFGFHAPTMSFPVAGTLMIEPTESESKKELDRFIESMVTIRKEIAAVETGKMDKENNALKNAPHTAQMLMKPEWNHPYSREEAVYPVEWLRGNKFWPVVGRVDNAYGDRNL 946          
BLAST of EY720674 vs. ExPASy Swiss-Prot
Match: GCSP_LEPIN (Glycine dehydrogenase [decarboxylating] OS=Leptospira interrogans GN=gcvP PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.186e-50
Identity = 108/221 (48.87%), Postives = 142/221 (64.25%), Query Frame = 1
Query:    1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPAMSWPVPGTLMIEPTESESXGIVGQVL*CSHLHQRTN*PIDNGKGHIHKNVLKGAPHPPSLVSGKAWN*PYSPEYRNYAGSWIRFWKFLAANGSLDNLFWFRHL 663
            LP H +V+             G ++AAPWGSA I+ IS+ YIA+MGS+GLT A++ +ILNANY+AKRLEK YP+L++G NG VAHE I+DLR  K +AGIE EDVAKRL+DYGFH P MS+PVPGTLMIEPTESES   + +      L  +    + NG      N LK +PH  ++V+   W+  Y  E   Y  SW++  KF    G +DN++  R+L
Sbjct:  739 LPGHVLVNNA------TGNEHGAVSAAPWGSASIVLISWVYIALMGSEGLTNATRNSILNANYIAKRLEKVYPVLYKGKNGFVAHECILDLRPFKKSAGIEVEDVAKRLIDYGFHAPTMSFPVPGTLMIEPTESESLEELDRFCEAMLLIYQEILDVQNGTLDKTDNPLKNSPHTAAMVTSDRWDHLYPRERAAYPASWLKDHKFWPYVGRVDNVYGDRNL 953          
BLAST of EY720674 vs. ExPASy Swiss-Prot
Match: GCSP_PROMM (Glycine dehydrogenase [decarboxylating] OS=Prochlorococcus marinus (strain MIT 9313) GN=gcvP PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 4.871e-50
Identity = 104/221 (47.06%), Postives = 142/221 (64.25%), Query Frame = 1
Query:    1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPAMSWPVPGTLMIEPTESESXGIVGQVL*CSHLHQRTN*PIDNGKGHIHKNVLKGAPHPPSLVSGKAWN*PYSPEYRNYAGSWIRFWKFLAANGSLDNLFWFRHL 663
            LP HP+ + GG       Q +G I+AAPWGSA ILPIS+ Y+ MMG++GL +AS +A+L+ANY+A RL  HYP+LFRG  G VAHE I+DLR LK +AG+E +D+AKRLMDYGFH P +SWPV GT+M+EPTESES   + +        +     I++G+     N L+ APH  + V+ + W+ PYS     +  +  R  KF  A   +DN +  R+L
Sbjct:  727 LPGHPLAACGG------EQGIGAISAAPWGSAGILPISWMYLRMMGAEGLRQASAVALLSANYLAHRLHPHYPVLFRGQAGLVAHECILDLRPLKRSAGLEVDDIAKRLMDYGFHAPTVSWPVAGTVMVEPTESESLEELNRFCDAMIAIREETAAIESGQIDPQNNPLRRAPHTLAAVTAEVWDRPYSRAEAAFPLAEQRQSKFWPAVSRIDNAYGDRNL 941          
BLAST of EY720674 vs. ExPASy Swiss-Prot
Match: GCSP_PROM3 (Glycine dehydrogenase [decarboxylating] OS=Prochlorococcus marinus (strain MIT 9303) GN=gcvP PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 4.871e-50
Identity = 104/221 (47.06%), Postives = 142/221 (64.25%), Query Frame = 1
Query:    1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPAMSWPVPGTLMIEPTESESXGIVGQVL*CSHLHQRTN*PIDNGKGHIHKNVLKGAPHPPSLVSGKAWN*PYSPEYRNYAGSWIRFWKFLAANGSLDNLFWFRHL 663
            LP HP+ + GG       Q +G I+AAPWGSA ILPIS+ Y+ MMG++GL +AS +A+L+ANY+A RL  HYP+LFRG  G VAHE I+DLR LK +AG+E +D+AKRLMDYGFH P +SWPV GT+M+EPTESES   + +        +     I++G+     N L+ APH  + V+ + W+ PYS     +  +  R  KF  A   +DN +  R+L
Sbjct:  747 LPGHPLAACGG------EQGIGAISAAPWGSAGILPISWMYLRMMGAEGLRQASAVALLSANYLAHRLHPHYPVLFRGQAGLVAHECILDLRPLKRSAGLEVDDIAKRLMDYGFHAPTVSWPVAGTVMVEPTESESLEELNRFCDAMIAIREETAAIESGQIDPQNNPLRRAPHTLAAVTAEVWDRPYSRAEAAFPLAEQRQSKFWPAVSRIDNAYGDRNL 961          
The following BLAST results are available for this feature:
BLAST of EY720674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 354
Match NameE-valueIdentityDescription
GCSP_NOSP71.463e-5452.49Glycine dehydrogenase [decarboxylating] OS=Nostoc ... [more]
GCSP_CHICK1.239e-5350.67Glycine dehydrogenase [decarboxylating], mitochond... [more]
GCSP_MOUSE1.618e-5350.22Glycine dehydrogenase [decarboxylating], mitochond... [more]
GCSP_ANASP6.147e-5350.68Glycine dehydrogenase [decarboxylating] OS=Anabaen... [more]
GCSP_SYNY36.796e-5252.25Glycine dehydrogenase [decarboxylating] OS=Synecho... [more]
GCSP_HUMAN1.282e-5048.00Glycine dehydrogenase [decarboxylating], mitochond... [more]
GCSP_BDEBA1.282e-5047.06Glycine dehydrogenase [decarboxylating] OS=Bdellov... [more]
GCSP_LEPIN2.186e-5048.87Glycine dehydrogenase [decarboxylating] OS=Leptosp... [more]
GCSP_PROMM4.871e-5047.06Glycine dehydrogenase [decarboxylating] OS=Prochlo... [more]
GCSP_PROM34.871e-5047.06Glycine dehydrogenase [decarboxylating] OS=Prochlo... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-012-G11-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720674 ID=EY720674; Name=EY720674; organism=Citrus sinensis; type=EST; length=663bp
CTGCCTTCACATCCTGTGGTATCCACAGGTGGTATTCCTGCCCCTGAAAA
GTCTCAACCCCTGGGCACAATTGCAGCTGCACCCTGGGGCTCTGCACTTA
TCCTGCCAATATCATATACGTACATAGCTATGATGGGTTCTAAAGGACTC
ACTGAGGCTTCAAAGATAGCTATTCTGAATGCAAACTACATGGCAAAACG
TTTGGAGAAACATTACCCCATCCTTTTCCGTGGTGTCAATGGAACAGTTG
CTCATGAATTCATTGTGGACTTAAGAGGCTTGAAAAATACTGCCGGGATA
GAGCCCGAAGATGTTGCCAAACGTCTTATGGATTATGGATTCCATGGACC
AGCAATGTCATGGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAA
GTGAAAGCCANGGAATAGTTGGACAGGTATTGTGATGCTCTCATCTCCAT
CAAAGAACAAATTGACCCATTGACAATGGGAAAGGACATATCCACAAGAA
TGTCCTGAAGGGGGCGCCTCATCCACCATCTTTGGTCAGTGGGAAAGCTT
GGAACTAACCATACTCTCCAGAATATCGCAACTATGCTGGTTCGTGGATC
CGGTTTTGGAAATTCTTGGCTGCTAACGGGAGCCTTGACAATTTGTTTTG
GTTCCGCCACCTC
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