EY720629

Overview
NameEY720629
Unique NameEY720629
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length756
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720629 vs. ExPASy Swiss-Prot
Match: PPSA_PYRHO (Probable phosphoenolpyruvate synthase OS=Pyrococcus horikoshii GN=ppsA PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.767e-15
Identity = 61/190 (32.11%), Postives = 101/190 (53.16%), Query Frame = 3
Query:  105 GHAVEVFANIGESAGVASAVEQGAEGIGLLRTELIFMAHKQAPDEATQEAEYRRVLDGLGG-----------RPLVVRTLDV----------GGDKPLPYWPIAKEENPFLGVRGIRLTLQRPQIMEAQLRALLRSADN--RPLRIMFPMVGSVDEWRQARDMTERLGLEIPVAELALGIMIEVPAAAFV 605
            G  V+V  ++ E A  A+A   GA+G+GLLR E + ++  Q P +  +E +   +++ L             RP+  RTLD           G D+P       +E NP LG RGIR  L +P+++ A+ +A+ +  +     + +M P+V   ++ R+A+++   +GLE P  ++A GIMIEVPAAA +
Sbjct:  515 GTLVKVNVSMPEVAERAAAT--GADGVGLLRAEHMILSIGQHPVKFIKEGKEDELVERLAEGIEKVAAAFYPRPVWYRTLDAPTNEFREMPGGEDEP-------EERNPMLGWRGIRRGLDQPELLRAEFKAIKKVVEKGYNNIGVMLPLVSHPEQIRKAKEIAREVGLE-PHKDVAWGIMIEVPAAAII 694          
BLAST of EY720629 vs. ExPASy Swiss-Prot
Match: PPSA_PYRFU (Phosphoenolpyruvate synthase OS=Pyrococcus furiosus GN=ppsA PE=1 SV=3)

HSP 1 Score: 81.2629 bits (199), Expect = 6.426e-15
Identity = 60/190 (31.58%), Postives = 100/190 (52.63%), Query Frame = 3
Query:  105 GHAVEVFANIGESAGVASAVEQGAEGIGLLRTELIFMAHKQAPDEATQEAEYRRVLDGLGG-----------RPLVVRTLDV----------GGDKPLPYWPIAKEENPFLGVRGIRLTLQRPQIMEAQLRALLRSADN--RPLRIMFPMVGSVDEWRQARDMTERLGLEIPVAELALGIMIEVPAAAFV 605
            G  V+V  ++ E A  A+A   GA+G+GLLR E + ++  Q P +  +E +   +++ L             RP+  RTLD           G D+P       +E NP LG RGIR  L +P+++ A+ +A+ +  +     + +M P+V   ++ R+A+ +   +GLE P  ++A G+MIEVPAAA +
Sbjct:  512 GTMVKVNVSMPEVAERAAAT--GADGVGLLRAEHMILSIGQHPIKFIKEGKEEELVEKLAEGIEKVAAAFYPRPVWYRTLDAPTNEFREMPGGEDEP-------EERNPMLGWRGIRRGLDQPELLRAEFKAIKKVVEKGYNNIGVMLPLVSHPEQIREAKRIAREVGLE-PHKDVAWGVMIEVPAAAII 691          
BLAST of EY720629 vs. ExPASy Swiss-Prot
Match: PPSA_ARCFU (Probable phosphoenolpyruvate synthase OS=Archaeoglobus fulgidus GN=ppsA PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.310e-11
Identity = 54/189 (28.57%), Postives = 91/189 (48.15%), Query Frame = 3
Query:  111 AVEVFANIG-ESAGVASAVEQGAEGIGLLRTELIFMAHKQAPDEATQEAEYRRVLDGLGG-----------RPLVVRTLDV----------GGDKPLPYWPIAKEENPFLGVRGIRLTLQRPQIMEAQLRALLRSADN--RPLRIMFPMVGSVDEWRQARDMTERLGLEIPVAELALGIMIEVPAAAFV 605
            A EV  NI         A E  A+G+GL R E + +  ++ P +  ++ E  R +D L             +P+ +RT+D           G D+P+       E NP LG RGIR  L   +   A++RA+ +  D     + +M P++ S +E ++A+++    GL  P+ ++  G+M+E PAAA +
Sbjct:  459 ATEVKVNISIPDVAERVARETNADGVGLFRIEHMVLGLEKHPMKFIRDGEIDRYIDLLYQEMKKVVKAFYPKPVWIRTIDAPTDEFRAMEGGEDEPI-------EANPMLGFRGIRRDLAEEEHFRAEMRAIKKLVDEGYTNVGVMLPLITSPEEVKRAKEIAISEGL--PLDKIEFGVMVETPAAALI 638          
The following BLAST results are available for this feature:
BLAST of EY720629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 53
Match NameE-valueIdentityDescription
PPSA_PYRHO3.767e-1532.11Probable phosphoenolpyruvate synthase OS=Pyrococcu... [more]
PPSA_PYRFU6.426e-1531.58Phosphoenolpyruvate synthase OS=Pyrococcus furiosu... [more]
PPSA_ARCFU4.310e-1128.57Probable phosphoenolpyruvate synthase OS=Archaeogl... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-703-012-B10-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720629 ID=EY720629; Name=EY720629; organism=Citrus sinensis; type=EST; length=756bp
CCGACGCCGCCACCTTGCAACGCGCCACCGTCGAACGCGACACCCGCGAA
CAACGCCTGCAAGCCGCCGCCGCGCAACGCCATGAACCGGCGCTGACCCG
CGATGGCCATGCCGTAGAAGTGTTCGCCAATATCGGCGAAAGCGCCGGGG
TTGCCAGCGCAGTCGAGCAGGGCGCCGAAGGTATCGGCCTGCTGCGCACC
GAACTGATTTTCATGGCGCACAAACAAGCGCCCGACGAAGCCACCCAGGA
AGCCGAATACCGCCGGGTACTCGACGGCCTCGGCGGTCGGCCACTGGTGG
TGCGCACCCTGGATGTGGGCGGTGACAAACCGCTGCCTTACTGGCCGATC
GCCAAGGAAGAAAACCCCTTCCTCGGCGTGCGTGGTATCCGCCTGACCCT
GCAACGCCCGCAGATCATGGAAGCGCAATTGCGTGCGCTGTTGCGCTCGG
CGGACAACCGTCCGCTGCGCATCATGTTCCCCATGGTCGGCAGCGTGGAT
GAGTGGCGCCAGGCCCGGGACATGACCGAGCGCCTGGGCCTGGAAATCCC
GGTGGCCGAACTGGCATTGGGGATCATGATCGAAGTGCCGGCGGCCGCGT
TTGTGGGCGCCGGTACTGGCGAAGGAAGTGAGTGTCTGGGGGGGGGGCCG
ACGTACCTCTGCGCGGTCGGCGGGGGGATGGGGCGGGGGCCGCCGGGGCT
GGCGGGGGGGGGTGTAGGGGTTGACGCGGGGGTGGGGGGTGGTGGGGGAG
GGGGGG
back to top