EY720627

Overview
NameEY720627
Unique NameEY720627
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length884
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720627 vs. ExPASy Swiss-Prot
Match: ETR1_SOLLC (Ethylene receptor 1 OS=Solanum lycopersicum GN=ETR1 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.612e-18
Identity = 54/176 (30.68%), Postives = 92/176 (52.27%), Query Frame = 1
Query:  136 MMQGKIWISPNYQGLARRMTLVLRFQFAPTFGRTIYPTGNSSDEPNFSSQFRGLRIILADDDDVNRTVTKMLLEKLGCEVVAVSSGFECLSALTVAENSFRIVVLDLQMPEMDGFEVAMRIRKFCS--HNWPLIIAVTASAEENTWERCLHIGMNGMIQKTVLLQGMADELRRVLQ 657
            +M+G IWI     G       +++         +  P        +    F+GL++++ D++ V+R VTK LL  LGC+V  V S  ECL  +T   +  ++V++D+ M  +D +EVA+ I +     H  PLI+A+T + +  T E C+ +GM+G+I K V +  M   L  +L+
Sbjct:  575 LMEGHIWIESEGLGKGSTAIFIIKLGIPGRANESKLPFVTKLPANHTQMSFQGLKVLVMDENGVSRMVTKGLLTHLGCDVTTVGSRDECLRVVT---HEHKVVIMDVSMQGIDCYEVAVVIHERFGKRHGRPLIVALTGNTDRVTKENCMRVGMDGVILKPVSVYKMRSVLSELLE 747          
BLAST of EY720627 vs. ExPASy Swiss-Prot
Match: ETR1_BRAOL (Ethylene receptor 1 OS=Brassica oleracea GN=ETR1 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 2.750e-18
Identity = 58/176 (32.95%), Postives = 97/176 (55.11%), Query Frame = 1
Query:  136 MMQGKIWISPNYQGLARRMTLVLRFQFAPTFGRTIYPTGNSSDEPNFSSQ-----FRGLRIILADDDDVNRTVTKMLLEKLGCEVVAVSSGFECLSALTVAENSFRIVVLDLQMPEMDGFEVAMRI-RKFCS-HNWPLIIAVTASAEENTWERCLHIGMNGMIQKTVLLQGMADEL 642
            +M+G IWI    +G+ +  T +   + A      I      S  P   +      F GL++++ D++ V+R VTK LL  LGCEV  VSS  EC   L V  +  R+V +D+  P ++ +++A+RI  KF   H  PL++A+T + +++T E+C+  G++G++ K V L  M + L
Sbjct:  558 LMEGNIWIES--EGVGKGCTAIFDVKLA------ISNESKQSGIPKVPANPQHVNFAGLKVLVMDENGVSRMVTKGLLVHLGCEVTTVSSNEEC---LRVVSHEHRVVFMDVCTPGVENYQIALRIHEKFTKRHQRPLLVALTGNTDKSTKEKCMSFGLDGVLLKPVSLDNMRNVL 722          
BLAST of EY720627 vs. ExPASy Swiss-Prot
Match: ETR1_PRUPE (Ethylene receptor OS=Prunus persica GN=ETR1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.591e-18
Identity = 57/176 (32.39%), Postives = 95/176 (53.98%), Query Frame = 1
Query:  136 MMQGKIWISPNYQGLARRMTLVLRFQFAPTFGRTIYPTGNSSDEPNFSSQFRGLRIILADDDDVNRTVTKMLLEKLGCEVVAVSSGFECLSALTVAENSFRIVVLDLQMPEMDGFEVAMRIR-KFCS-HNWPLIIAVTASAEENTWERCLHIGMNGMIQKTVLLQGMADELRRVLQ 657
            +M+G IWI     G       +++  FA     +  P        +  + F GL++++ DD   N +VTK LL  LGC+V  VSS  E L  ++      ++V +D+ MP +DG+E+A+RI  KF   H  P+++A+T + ++ T E C+ +GM+G+I K V +  M   L  +L+
Sbjct:  561 LMEGHIWIESEGPGKGCTAIFIVKLGFAERSNESKLPFLTKVQANHVQTNFPGLKVLVMDD---NGSVTKGLLVHLGCDVTTVSSIDEFLHVIS---QEHKVVFMDVCMPGIDGYELAVRIHEKFTKRHERPVLVALTGNIDKMTKENCMRVGMDGVILKPVSVDKMRSVLSELLE 730          
BLAST of EY720627 vs. ExPASy Swiss-Prot
Match: ETR2_SOLLC (Ethylene receptor 2 OS=Solanum lycopersicum GN=ETR2 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 8.000e-18
Identity = 53/176 (30.11%), Postives = 91/176 (51.70%), Query Frame = 1
Query:  136 MMQGKIWISPNYQGLARRMTLVLRFQFAPTFGRTIYPTGNSSDEPNFSSQFRGLRIILADDDDVNRTVTKMLLEKLGCEVVAVSSGFECLSALTVAENSFRIVVLDLQMPEMDGFEVAMRI-RKFCSH-NWPLIIAVTASAEENTWERCLHIGMNGMIQKTVLLQGMADELRRVLQ 657
            +M+G IWI     G       +++         +  P        +    F+GL++++ DD+  +R VTK LL  LGC+V  + SG ECL  LT      +++++D  +  M+ ++VA+ +  KF      PLI+A+T + ++ T E CL +GM+G+I K V +  M   L  +L+
Sbjct:  559 LMEGHIWIESEGVGKGSTAIFIVKLGIPGRLNESKLPFTAGLPANHMQMTFQGLKVLVMDDNGFSRMVTKSLLVHLGCDVTTIGSGDECLRILT---REHKVLIMDASITGMNCYDVAVSVHEKFGKRLERPLIVALTGNTDQVTKENCLRVGMDGVILKPVSIDKMRSVLSGLLE 731          
BLAST of EY720627 vs. ExPASy Swiss-Prot
Match: DHKL_DICDI (Hybrid signal transduction histidine kinase L OS=Dictyostelium discoideum GN=dhkL PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.553e-11
Identity = 39/128 (30.47%), Postives = 74/128 (57.81%), Query Frame = 1
Query:  298 RIILADDDDVNRTVTKMLLEKLGCEVVAVSSGFECLSALTVAE-NSFRIVVLDLQMPEMDGFEVAMRIR---KFCSHNWPLIIAVTASAEENTWERCLHIGMNGMIQKTVLLQGMADELRRVLQQVGE 669
            ++++ DD+ +N  +   +L+ +GCEV +V SG + L+ +  +  +S+  + LD+QMP+MDGF+V+ +IR   K  S     IIA TA+  +    +C   GM+  I K +       E++ ++++ G+
Sbjct: 1570 KVLVVDDNHINIQILSKMLQTVGCEVDSVLSGADALAKINQSSGDSYDAIFLDIQMPDMDGFQVSRKIREREKKFSLPRVAIIATTANVFKEDQLKCFDAGMDDFISKPI----KRAEIKEIIKKYGK 1693          
The following BLAST results are available for this feature:
BLAST of EY720627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
ETR1_SOLLC1.612e-1830.68Ethylene receptor 1 OS=Solanum lycopersicum GN=ETR... [more]
ETR1_BRAOL2.750e-1832.95Ethylene receptor 1 OS=Brassica oleracea GN=ETR1 P... [more]
ETR1_PRUPE3.591e-1832.39Ethylene receptor OS=Prunus persica GN=ETR1 PE=2 S... [more]
ETR2_SOLLC8.000e-1830.11Ethylene receptor 2 OS=Solanum lycopersicum GN=ETR... [more]
DHKL_DICDI5.553e-1130.47Hybrid signal transduction histidine kinase L OS=D... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-012-B08-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720627 ID=EY720627; Name=EY720627; organism=Citrus sinensis; type=EST; length=884bp
CCACGCGTCCGCTGCCCTCTAGAATGCAGCATGCTCTTCAGCTGAGAGCT
TTATGTATGGTTCTATTGCAATAGTCTGTGCCTGTTAATTTTGCCAACCT
CTGACTTTACTATTGTGAATAATGTTAATAAGCAGATGATGCAAGGTAAG
ATATGGATATCCCCTAACTATCAGGGTCTTGCACGAAGGATGACACTTGT
TCTGAGGTTTCAGTTCGCACCAACATTTGGAAGAACCATATATCCTACTG
GAAATTCCTCAGATGAACCAAATTTCAGTTCTCAGTTTAGAGGCCTTCGA
ATAATTCTAGCTGACGATGATGACGTGAATCGCACTGTGACCAAGATGCT
TCTTGAGAAGCTAGGTTGCGAAGTAGTTGCTGTTTCATCTGGGTTTGAAT
GCCTTAGTGCACTTACTGTAGCAGAAAATTCTTTCAGAATTGTTGTTTTG
GACCTTCAGATGCCTGAAATGGATGGATTTGAAGTTGCAATGAGAATTCG
AAAGTTCTGCAGCCATAATTGGCCGTTGATTATAGCTGTGACAGCGAGTG
CTGAGGAAAATACTTGGGAGCGATGTCTACATATAGGAATGAATGGAATG
ATTCAAAAAACTGTTCTCTTACAAGGGATGGCAGATGAACTTCGAAGAGT
TCTGCAACAAGTAGGTGAAAGGGTATGATGGGCANGTAACGATGTTTTCT
GCCCTCGCATAGTTTAGGTGCCTTTGAGGGTCTTTAATCAAGCACGCCTA
CCAAGGTCAANCATGCCTAAATATATCCAAAACTAAAATTTGCATGTCTG
GGTATACCAATTGTAACTGATAACTTCTGCTATTCTGTTGTCCACCAGTC
TGGTTTGCTAAATTCTTTAAAAAAGGATCTACAT
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