EY720621

Overview
NameEY720621
Unique NameEY720621
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720621 vs. ExPASy Swiss-Prot
Match: LIPB_NEIMA (Octanoyltransferase OS=Neisseria meningitidis serogroup A GN=lipB PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.182e-11
Identity = 48/141 (34.04%), Postives = 68/141 (48.23%), Query Frame = 3
Query:  438 RNEDCPDTLIVLQHSPVYTMGTGGSEEYLNFDLKDPPFQVYRTERGGEVTYHGPGQLVMYPIISLRNHKMDLHWYLRALKGGCHSCALNICIQASRVEG*LGVGFGHHKRAHEDSCIP-GDAYLGLTWSVPPILPPLLGVS 857
            RN D  D L V++H PV+T G  G  E+L      P  Q+   +RGG++TYHGPGQLV+Y +I  +  K  +   + AL+    +      I+A+      GV  G  K A     I  G  Y GL  +V   L P   ++
Sbjct:   25 RNADTEDELWVVEHPPVFTQGLVGKPEHLLIRDDIPVVQI---DRGGQITYHGPGQLVVYTMIDFKRRKTSVRNIVSALENSIIATLAEYGIEAAADPKRPGVYVGERKIASLGLRIKNGSVYHGLALNVNMDLSPFTHIN 162          
BLAST of EY720621 vs. ExPASy Swiss-Prot
Match: LIPB_METCA (Octanoyltransferase OS=Methylococcus capsulatus GN=lipB PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.182e-11
Identity = 34/81 (41.98%), Postives = 52/81 (64.20%), Query Frame = 3
Query:  435 ERNEDCPDTLIVLQHSPVYTMGTGGSEEYLNFDLKDPPFQVYRTERGGEVTYHGPGQLVMYPIISLRNHKMDLHWYLRALK 677
            +R +D  D L +++H PVYT+G  G   ++  D    P  V RT+RGG+VTYHGPGQLV+Y ++ L+  K+ +   + AL+
Sbjct:   26 QRADDTADELWLVEHPPVYTLGMNGDPAHI-LDAGGVP--VVRTDRGGQVTYHGPGQLVLYTLVDLQRRKLGVRRMVSALE 103          
BLAST of EY720621 vs. ExPASy Swiss-Prot
Match: LIPB_SHEFN (Octanoyltransferase OS=Shewanella frigidimarina (strain NCIMB 400) GN=lipB PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.156e-11
Identity = 30/70 (42.86%), Postives = 46/70 (65.71%), Query Frame = 3
Query:  438 RNEDCPDTLIVLQHSPVYTMGTGGSEEYLNFDLKDPPFQVYRTERGGEVTYHGPGQLVMYPIISLRNHKM 647
            R+ D  D L +++H PV+T G  G  E++   L      V + +RGG+VTYHGPGQLV+YP+I ++ +K+
Sbjct:   30 RDSDSQDELWIVEHPPVFTQGQAGKSEHI---LNPGDIPVIQVDRGGQVTYHGPGQLVVYPLIDIKRNKL 96          
BLAST of EY720621 vs. ExPASy Swiss-Prot
Match: LIPB_MYCVP (Octanoyltransferase OS=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) GN=lipB PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.156e-11
Identity = 47/125 (37.60%), Postives = 63/125 (50.40%), Query Frame = 3
Query:  372 VPYNEAWSWQKNVVXEKKALIERNEDCPDTLIVLQHSPVYTMGTGGSEEYLNFDLKDPPFQVYRTERGGEVTYHGPGQLVMYPIISLRNHKMDLHWYLRALKGGCHSCALNICIQASRVEG*LGV 746
            V Y  AW  Q+ +         R E  PDTL++LQH  VYT G     E    D       V  T+RGG++T+HGPGQLV YPII L    +D+  ++R L+    +    + +   RVEG  GV
Sbjct:   26 VDYLAAWDLQREIAEA------RAEGGPDTLLLLQHPAVYTAGRRTLPEERPAD----GTPVIDTDRGGKITWHGPGQLVGYPIIGLA-EPLDVVNFVRRLEESLITVCAELGLPTGRVEGRSGV 139          
BLAST of EY720621 vs. ExPASy Swiss-Prot
Match: LIPB_MYCS2 (Octanoyltransferase OS=Mycobacterium smegmatis GN=lipB PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.156e-11
Identity = 44/123 (35.77%), Postives = 61/123 (49.59%), Query Frame = 3
Query:  378 YNEAWSWQKNVVXEKKALIERNEDCPDTLIVLQHSPVYTMGTGGSEEYLNFDLKDPPFQVYRTERGGEVTYHGPGQLVMYPIISLRNHKMDLHWYLRALKGGCHSCALNICIQASRVEG*LGV 746
            Y  AW  Q+     + A        PDTL++L+H PVYT G          D       V  T+RGG++T+HGPGQLV YPII L    +D+  ++R L+    +    + +   RVEG  GV
Sbjct:   21 YTSAWQLQRETADARVA------GGPDTLLLLEHPPVYTAGKRTEPHERPLD----GTPVVDTDRGGKITWHGPGQLVGYPIIGL-TEPLDVVNFVRRLEESLITVCAELGLHTERVEGRSGV 132          
BLAST of EY720621 vs. ExPASy Swiss-Prot
Match: LIPB_ERWT9 (Octanoyltransferase OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=lipB PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.156e-11
Identity = 31/81 (38.27%), Postives = 53/81 (65.43%), Query Frame = 3
Query:  435 ERNEDCPDTLIVLQHSPVYTMGTGGSEEYLNFDLKDPPFQVYRTERGGEVTYHGPGQLVMYPIISLRNHKMDLHWYLRALK 677
            +RN++ PD + +++H PV+T G  G  E+L   L      V +++RGG+VTYHGPGQ VMY +I+L+  ++ +   + A++
Sbjct:   29 QRNDETPDEIWLVEHLPVFTQGQAGKSEHL---LMPGDIPVMQSDRGGQVTYHGPGQQVMYVMINLKRRRVGVRQLVTAIE 106          
BLAST of EY720621 vs. ExPASy Swiss-Prot
Match: LIPB_CORJK (Octanoyltransferase OS=Corynebacterium jeikeium (strain K411) GN=lipB PE=3 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.156e-11
Identity = 44/126 (34.92%), Postives = 64/126 (50.79%), Query Frame = 3
Query:  372 VPYNEAWSWQKNVVXEKKALIERNEDCPDTLIVLQHSPVYTMGTGGSEEYLNFDLKDPPFQVYRTERGGEVTYHGPGQLVMYPIISLRNHKMDLHWYLRALKGGCHSCALNICIQAS-RVEG*LGV 746
            V Y + W  Q N+  ++       E  PDT+++LQH P YT G    +     D       V   +RGG +T+HGPGQLV YPII L +  +D+  Y+R L+        ++ +  + RVEG  GV
Sbjct:   32 VDYEDTWHLQANLAAQRA-----EEKIPDTILLLQHPPTYTAGKRTQDS----DRPTNGLPVVDVDRGGRITWHGPGQLVAYPIIKLAD-PVDVVDYVRRLEQALIQTCEDLGLHGTGRVEGRSGV 147          
BLAST of EY720621 vs. ExPASy Swiss-Prot
Match: LIPB_VIBHB (Octanoyltransferase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=lipB PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.429e-11
Identity = 31/71 (43.66%), Postives = 48/71 (67.61%), Query Frame = 3
Query:  435 ERNEDCPDTLIVLQHSPVYTMGTGGSEEYLNFDLKDPPFQVYRTERGGEVTYHGPGQLVMYPIISLRNHKM 647
            +R +D PD + +++H+PV+T G  G  E+L   +      V +++RGG+VTYHGPGQLV Y +I+LR  K+
Sbjct:   28 QRTDDTPDEVWLVEHNPVFTQGQAGKAEHL---INTGDIPVVQSDRGGQVTYHGPGQLVAYFLINLRRKKL 95          
BLAST of EY720621 vs. ExPASy Swiss-Prot
Match: LIPB_STRCO (Octanoyltransferase OS=Streptomyces coelicolor GN=lipB PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.429e-11
Identity = 47/127 (37.01%), Postives = 67/127 (52.76%), Query Frame = 3
Query:  372 VPYNEAWSWQKNVVXEKKALIERNEDCPDTLIVLQHSPVYTMG--TGGSEEYLNFDLKDPPFQVYRTERGGEVTYHGPGQLVMYPIISLRNHKMDLHWYLRALKGGCHSCALNICIQASRVEG*LGV 746
            V Y EAW  Q+ V   +       ++ PDT+++L+H PVYT G  T  SE  L+         V   +RGG++T+HGPGQLV YPI  L    +D+  ++R L+           ++ SRVEG  GV
Sbjct:   16 VEYQEAWDEQRRVHAARFV-----DEVPDTVLLLEHPPVYTAGRRTEDSERPLDGT------PVIDVDRGGKITWHGPGQLVGYPIQKL-PRPVDVVAHVRRLEEALIRTCAEFGLETSRVEGRSGV 130          
BLAST of EY720621 vs. ExPASy Swiss-Prot
Match: LIPB_DESRM (Octanoyltransferase OS=Desulfotomaculum reducens (strain MI-1) GN=lipB PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.429e-11
Identity = 34/105 (32.38%), Postives = 57/105 (54.29%), Query Frame = 3
Query:  372 VPYNEAWSWQKNVVXEKKALIERNEDCPDTLIVLQHSPVYTMGTGGSEEYL---NFDLKDPPFQVYRTERGGEVTYHGPGQLVMYPIISLRNHKMDLHWYLRALK 677
            + Y +A + Q     EK  L+ +     D +++LQH P  T+GT  +   +     +LK     ++++ RGG+VTYHGPGQ+V YPI+ L  H   +  Y+  ++
Sbjct:   11 IDYQDALTMQ-----EKLLLLRQQNKVEDIMLLLQHPPTLTLGTRENRYNILVPEVELKRQGVNIFKSNRGGDVTYHGPGQIVGYPIVDLNGHGKSIREYVHKIE 110          
The following BLAST results are available for this feature:
BLAST of EY720621 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 135
Match NameE-valueIdentityDescription
LIPB_NEIMA3.182e-1134.04Octanoyltransferase OS=Neisseria meningitidis sero... [more]
LIPB_METCA3.182e-1141.98Octanoyltransferase OS=Methylococcus capsulatus GN... [more]
LIPB_SHEFN4.156e-1142.86Octanoyltransferase OS=Shewanella frigidimarina (s... [more]
LIPB_MYCVP4.156e-1137.60Octanoyltransferase OS=Mycobacterium vanbaalenii (... [more]
LIPB_MYCS24.156e-1135.77Octanoyltransferase OS=Mycobacterium smegmatis GN=... [more]
LIPB_ERWT94.156e-1138.27Octanoyltransferase OS=Erwinia tasmaniensis (strai... [more]
LIPB_CORJK4.156e-1134.92Octanoyltransferase OS=Corynebacterium jeikeium (s... [more]
LIPB_VIBHB5.429e-1143.66Octanoyltransferase OS=Vibrio harveyi (strain ATCC... [more]
LIPB_STRCO5.429e-1137.01Octanoyltransferase OS=Streptomyces coelicolor GN=... [more]
LIPB_DESRM5.429e-1132.38Octanoyltransferase OS=Desulfotomaculum reducens (... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-012-A12-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720621 ID=EY720621; Name=EY720621; organism=Citrus sinensis; type=EST; length=874bp
CACGCGTCCGCGCTGCCCTGTTAATTCTCACTCATCTTCATTATTCTCGT
AAACCTTTTTCCCAAATGTATGTGAATGAGAATTTGGTGCATTTTTGGCT
TCATGTTTGATCAAATGGATCCTTCTTCGACCGACTAGTGGAAGATCATT
TTTTTTCCTTTCTTTAAAAAAAAAAAGAAGAAGAAAAAAGCATGATTCTT
GCAGCAACTTCAGGTTTTTGTTCAGTCCCAACATGCCCAAGTCTTGACCA
ATCCAAAAAGCTAAACCGTGGCAAAATCTTCTGCGAATCAAAGCAAGTAT
TATATTCCAAAACCTCAATAACCCATGAAAGAAGAAAAACGTGTGAGTGT
TTTGATTTGTACAAGGAACTGGTTCCTTACAATGAAGCATGGTCATGGCA
GAAAAACGTAGTANAGGAAAAGAAGGCGTTGATTGAAAGAAATGAAGACT
GCCCCGACACGCTGATTGTTCTACAGCATAGTCCTGTTTATACAATGGGT
ACTGGTGGCTCTGAAGAGTACCTTAATTTTGACTTAAAGGACCCTCCTTT
TCAAGTTTATCGAACTGAACGTGGCGGTGAAGTTACCTATCATGGTCCTG
GCCAGCTAGTTATGTACCCTATCATCAGTCTGCGAAATCACAAGATGGAT
CTTCATTGGTACCTCAGGGCACTTAAGGGAGGTTGCCATTCGTGTGCTCT
CAACATCTGCATCCAGGCCTCCCGGGTCGAGGGTTGACTGGGGGTTGGGT
TCGGACATCACAAACGGGCGCATGAGGATAGCTGTATCCCAGGGGATGCT
TATCTTGGGCTTACATGGAGTGTTCCACCGATCTTACCACCCTTGCTTGG
AGTATCCCTGCCGTATTACAGTCC
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