EY720620

Overview
NameEY720620
Unique NameEY720620
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length823
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY_RICBE (Citrate synthase (Fragment) OS=Rickettsia bellii GN=gltA PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.353e-16
Identity = 39/62 (62.90%), Postives = 50/62 (80.65%), Query Frame = 1
Query:  403 YDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            YDPG+++TA  RS+I YIDGD+GIL +RGY I++LAE S FLEVAYLL+YG LP+  Q  D+
Sbjct:   42 YDPGFMSTASCRSTITYIDGDQGILRHRGYDIKDLAEKSDFLEVAYLLIYGELPNNKQYNDF 103          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY_RICTY (Citrate synthase OS=Rickettsia typhi GN=gltA PE=3 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 3.015e-16
Identity = 43/91 (47.25%), Postives = 61/91 (67.03%), Query Frame = 1
Query:  304 GKRYQIPVSQEGTVKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQ 576
            GK +++P+ +    K  D   I+    +     YDPG+++TA  +S+I YIDGD+GIL +RGY I++LAE S FLEVAYL++YG LPS  Q
Sbjct:   18 GKMFKLPILKASIGK--DVIDISRVSAEADCFTYDPGFMSTASCQSTITYIDGDKGILWHRGYDIKDLAEKSDFLEVAYLMIYGELPSSEQ 106          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY_RICHE (Citrate synthase (Fragment) OS=Rickettsia helvetica GN=gltA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.938e-16
Identity = 43/95 (45.26%), Postives = 62/95 (65.26%), Query Frame = 1
Query:  304 GKRYQIPVSQEGTVKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            GK +++P+ +       D   I+    +     YDPG+++TA  +S+I YIDGD+GIL +RGY I++LAE S FLEVAYLL+YG LPS  Q  ++
Sbjct:   11 GKIFKLPILKASI--GEDVINISRVSAEADCFTYDPGFMSTASCQSTITYIDGDKGILRHRGYDIKDLAEKSDFLEVAYLLIYGELPSSEQYNNF 103          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY_RICAK (Citrate synthase (Fragment) OS=Rickettsia akari GN=gltA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.938e-16
Identity = 44/95 (46.32%), Postives = 62/95 (65.26%), Query Frame = 1
Query:  304 GKRYQIPVSQEGTVKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            GK +Q+P+ +       D   I+    +     YDPG+++TA  +S+I YIDGD+GIL +RGY I++LAE S FLEVAYLL+YG LPS  Q  ++
Sbjct:   11 GKIFQLPILKASI--GEDVIDISRVSAEVNCFTYDPGFMSTASCKSTITYIDGDKGILRHRGYNIKDLAEKSDFLEVAYLLIYGELPSIEQYNNF 103          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY_RICFE (Citrate synthase OS=Rickettsia felis GN=gltA PE=3 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 5.143e-16
Identity = 43/95 (45.26%), Postives = 63/95 (66.32%), Query Frame = 1
Query:  304 GKRYQIPVSQEGTVKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            GK +++P+ +       D   I+   ++     YDPG+++TA  +S+I YIDGD+GIL +RGY I++LAE S FLEVAYLL+YG LPS  Q  ++
Sbjct:   18 GKIFKLPILKASI--GEDVIDISRVSSEADCFTYDPGFMSTASCQSTITYIDGDKGILRHRGYDIKDLAEKSDFLEVAYLLIYGELPSIEQYNNF 110          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY_RHIME (Citrate synthase OS=Rhizobium meliloti GN=gltA PE=3 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 5.143e-16
Identity = 44/95 (46.32%), Postives = 61/95 (64.21%), Query Frame = 1
Query:  304 GKRYQIPVSQEGTVKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            GK   +PV + G++   D   I +      +  YDPG+ +TA   S I YIDGDEG+L +RG+PIE+LAE   FLEV YLL+YG LP+++Q  D+
Sbjct:   12 GKSADLPV-RSGSI-GPDVVDIGSLYKQTTMFTYDPGFTSTASCESKITYIDGDEGVLLHRGFPIEQLAEHGDFLEVCYLLLYGELPTKAQKADF 104          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY2_RHITR (Citrate synthase, plasmid OS=Rhizobium tropici GN=pcsA PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.143e-16
Identity = 38/62 (61.29%), Postives = 48/62 (77.42%), Query Frame = 1
Query:  403 YDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            YDPG+ +TA   SSI +IDGDEG+L +RGYPIE+LAE   FLEV YLL+YG LP+ +Q  D+
Sbjct:   43 YDPGFTSTASCESSITFIDGDEGVLLHRGYPIEQLAEHGDFLEVCYLLLYGELPTAAQKKDF 104          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY1_RHITR (Citrate synthase, chromosomal OS=Rhizobium tropici GN=ccsA PE=3 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 5.143e-16
Identity = 38/62 (61.29%), Postives = 48/62 (77.42%), Query Frame = 1
Query:  403 YDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            YDPG+ +TA   SSI +IDGDEG+L +RGYPIE+LAE   FLEV YLL+YG LP+ +Q  D+
Sbjct:   43 YDPGFTSTASCESSITFIDGDEGVLLHRGYPIEQLAEHGDFLEVCYLLLYGELPTAAQKKDF 104          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY1_MYCTU (Citrate synthase 1 OS=Mycobacterium tuberculosis GN=gltA2 PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.717e-16
Identity = 39/66 (59.09%), Postives = 48/66 (72.73%), Query Frame = 1
Query:  391 GLKLYDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            G   +D G+ NTA  +SSI YIDGD GIL YRGYPI++LAE S+F+EV YLL+YG LP   QL  +
Sbjct:   41 GHTTFDVGFANTAAAKSSITYIDGDAGILRYRGYPIDQLAEKSTFIEVCYLLIYGELPDTDQLAQF 106          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY_RICSL (Citrate synthase (Fragment) OS=Rickettsia slovaca GN=gltA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.773e-16
Identity = 43/95 (45.26%), Postives = 62/95 (65.26%), Query Frame = 1
Query:  304 GKRYQIPVSQEGTVKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            GK +++P+ +       D   I+    +     YDPG+++TA  +S+I YIDGD+GIL +RGY I++LAE S FLEVAYLL+YG LPS  Q  ++
Sbjct:   11 GKIFKLPILKASI--GEDVIDISRVSAEADCFTYDPGFMSTASCQSTITYIDGDKGILRHRGYDIKDLAEKSDFLEVAYLLIYGELPSGEQYNNF 103          
The following BLAST results are available for this feature:
BLAST of EY720620 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
CISY_RICBE1.353e-1662.90Citrate synthase (Fragment) OS=Rickettsia bellii G... [more]
CISY_RICTY3.015e-1647.25Citrate synthase OS=Rickettsia typhi GN=gltA PE=3 ... [more]
CISY_RICHE3.938e-1645.26Citrate synthase (Fragment) OS=Rickettsia helvetic... [more]
CISY_RICAK3.938e-1646.32Citrate synthase (Fragment) OS=Rickettsia akari GN... [more]
CISY_RICFE5.143e-1645.26Citrate synthase OS=Rickettsia felis GN=gltA PE=3 ... [more]
CISY_RHIME5.143e-1646.32Citrate synthase OS=Rhizobium meliloti GN=gltA PE=... [more]
CISY2_RHITR5.143e-1661.29Citrate synthase, plasmid OS=Rhizobium tropici GN=... [more]
CISY1_RHITR5.143e-1661.29Citrate synthase, chromosomal OS=Rhizobium tropici... [more]
CISY1_MYCTU6.717e-1659.09Citrate synthase 1 OS=Mycobacterium tuberculosis G... [more]
CISY_RICSL8.773e-1645.26Citrate synthase (Fragment) OS=Rickettsia slovaca ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-012-A11-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720620 ID=EY720620; Name=EY720620; organism=Citrus sinensis; type=EST; length=823bp
CCACGCGTCCGATCAAACTTGAAGGCAAATTCATTTATTCAATTTGTATT
GACTCATTCATCAACCGAATCAATTGGACTAGAGCTCGTTTTATCTAGTT
TTGCTTCAAAAACAATGGCGCCAAGCGTAGAATCATCGTCGGCCGTTACA
GCTCGTGGGCGGTTGGCCGTACTGACAGCTCATTTGGCATCAACCGAGTC
AAATCAAGGCAGGCTCATCGAGCCATGGTGCACCTCTGCTCAGTCCATGG
TACCACCTCCGGGAAATCTCAAGGGCAGCTTGACCGTCGTCGACGAACGA
ACCGGCAAAAGATACCAGATACCTGTCTCTCAGGAAGGCACCGTTAAAGC
CACCGACTTCAAGAAGATAACAACAGGAAAGAACGACAAGGGTTTGAAAC
TGTATGATCCGGGGTACTTGAACACGGCGCCTGTGAGATCATCAATTTGT
TATATTGATGGAGATGAGGGTATCCTTANATACAGAGGCTACCCTATTGA
GGAATTGGCAGAGTCCAGTTCTTTCTTGGAAGTCGCTTATCTTTTGATGT
ATGGGAATTTGCCTTCCGAGAGTCAGCTGACAGACTGGGGAATTGGCTGT
GTGTGAGGATTCTGGCGTGGCGGAGGGAGTTTGGGATATTATCCAAGCGA
TGCCGTCGTGATGCCACCCTATGGGAAGTGGTTGTCAGAGCTATGAATGC
TCTTTCCTATCTTGATCGGGAATGCCGACCCTGGTCTGAGACGCCAAAAT
AGGACGATGGCGAGACACGGGGGGGACCAGCGCACTGCACAGTATAGGTG
AGAAGGGACCGACGCATGGAGGG
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