EY720620

Overview
NameEY720620
Unique NameEY720620
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length823
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY_RICSI (Citrate synthase (Fragment) OS=Rickettsia sibirica GN=gltA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.773e-16
Identity = 43/95 (45.26%), Postives = 62/95 (65.26%), Query Frame = 1
Query:  304 GKRYQIPVSQEGTVKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            GK +++P+ +       D   I+    +     YDPG+++TA  +S+I YIDGD+GIL +RGY I++LAE S FLEVAYLL+YG LPS  Q  ++
Sbjct:   11 GKIFKLPILKASI--GEDVIDISRVSAEADCFTYDPGFMSTASCQSTITYIDGDKGILRHRGYDIKDLAEKSDFLEVAYLLIYGELPSGEQYNNF 103          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY_RICRH (Citrate synthase (Fragment) OS=Rickettsia rhipicephali GN=gltA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.773e-16
Identity = 43/95 (45.26%), Postives = 62/95 (65.26%), Query Frame = 1
Query:  304 GKRYQIPVSQEGTVKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            GK +++P+ +       D   I+    +     YDPG+++TA  +S+I YIDGD+GIL +RGY I++LAE S FLEVAYLL+YG LPS  Q  ++
Sbjct:   11 GKIFKLPILKASI--GEDVIDISRVSAEADCFTYDPGFMSTASCQSTITYIDGDKGILRHRGYDIKDLAEKSDFLEVAYLLIYGELPSGEQYNNF 103          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY_RICPA (Citrate synthase (Fragment) OS=Rickettsia parkeri GN=gltA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.773e-16
Identity = 43/95 (45.26%), Postives = 62/95 (65.26%), Query Frame = 1
Query:  304 GKRYQIPVSQEGTVKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            GK +++P+ +       D   I+    +     YDPG+++TA  +S+I YIDGD+GIL +RGY I++LAE S FLEVAYLL+YG LPS  Q  ++
Sbjct:   11 GKIFKLPILKASI--GEDVIDISRVSAEADCFTYDPGFMSTASCQSTITYIDGDKGILRHRGYDIKDLAEKSDFLEVAYLLIYGELPSGEQYNNF 103          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY_RICMA (Citrate synthase (Fragment) OS=Rickettsia massiliae GN=gltA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.773e-16
Identity = 43/95 (45.26%), Postives = 62/95 (65.26%), Query Frame = 1
Query:  304 GKRYQIPVSQEGTVKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            GK +++P+ +       D   I+    +     YDPG+++TA  +S+I YIDGD+GIL +RGY I++LAE S FLEVAYLL+YG LPS  Q  ++
Sbjct:   11 GKIFKLPILKASI--GEDVIDISRVSAEADCFTYDPGFMSTASCQSTITYIDGDKGILRHRGYDIKDLAEKSDFLEVAYLLIYGELPSGEQYNNF 103          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY_RICCN (Citrate synthase OS=Rickettsia conorii GN=gltA PE=3 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 8.773e-16
Identity = 43/95 (45.26%), Postives = 62/95 (65.26%), Query Frame = 1
Query:  304 GKRYQIPVSQEGTVKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            GK +++P+ +       D   I+    +     YDPG+++TA  +S+I YIDGD+GIL +RGY I++LAE S FLEVAYLL+YG LPS  Q  ++
Sbjct:   18 GKIFKLPILKASI--GEDVIDISRVSAEADCFTYDPGFMSTASCQSTITYIDGDKGILRHRGYDIKDLAEKSDFLEVAYLLIYGELPSGEQYNNF 110          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY_RICAE (Citrate synthase OS=Rickettsia africae (strain ESF-5) GN=gltA PE=3 SV=2)

HSP 1 Score: 84.3445 bits (207), Expect = 8.773e-16
Identity = 43/95 (45.26%), Postives = 62/95 (65.26%), Query Frame = 1
Query:  304 GKRYQIPVSQEGTVKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            GK +++P+ +       D   I+    +     YDPG+++TA  +S+I YIDGD+GIL +RGY I++LAE S FLEVAYLL+YG LPS  Q  ++
Sbjct:   18 GKIFKLPILKASI--GEDVIDISRVSAEADCFTYDPGFMSTASCQSTITYIDGDKGILRHRGYDIKDLAEKSDFLEVAYLLIYGELPSGEQYNNF 110          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY_ASTRI (Citrate synthase (Fragment) OS=Astrakhan rickettsia GN=gltA PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.773e-16
Identity = 43/95 (45.26%), Postives = 62/95 (65.26%), Query Frame = 1
Query:  304 GKRYQIPVSQEGTVKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            GK +++P+ +       D   I+    +     YDPG+++TA  +S+I YIDGD+GIL +RGY I++LAE S FLEVAYLL+YG LPS  Q  ++
Sbjct:   11 GKIFKLPILKASI--GEDVIDISRVSAEADCFTYDPGFMSTASCQSTITYIDGDKGILRHRGYDIKDLAEKSDFLEVAYLLIYGELPSGEQYNNF 103          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY_RICJA (Citrate synthase (Fragment) OS=Rickettsia japonica GN=gltA PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.146e-15
Identity = 42/95 (44.21%), Postives = 62/95 (65.26%), Query Frame = 1
Query:  304 GKRYQIPVSQEGTVKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            GK +++P+ +       D   I+    +     YDPG+++TA  +S++ YIDGD+GIL +RGY I++LAE S FLEVAYLL+YG LPS  Q  ++
Sbjct:   11 GKIFKLPILKASI--GEDVIDISRVSAEADCFTYDPGFMSTASCQSTVTYIDGDKGILRHRGYDIKDLAEKSDFLEVAYLLIYGELPSGEQYNNF 103          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY_RICAU (Citrate synthase (Fragment) OS=Rickettsia australis GN=gltA PE=3 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 3.334e-15
Identity = 42/95 (44.21%), Postives = 62/95 (65.26%), Query Frame = 1
Query:  304 GKRYQIPVSQEGTVKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            GK +++P+ +       D   I+    +     YDPG+++TA  +S+I YIDGD+GIL +RGY I++LAE S FLEVAYLL+YG LP+  Q  ++
Sbjct:   11 GKIFKLPILKASI--GEDVIDISRVSAEADCFTYDPGFMSTASCQSTITYIDGDKGILRHRGYNIKDLAEKSDFLEVAYLLIYGELPTIEQYNNF 103          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY_BARHE (Citrate synthase OS=Bartonella henselae GN=gltA PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.334e-15
Identity = 46/106 (43.40%), Postives = 66/106 (62.26%), Query Frame = 1
Query:  271 KGSLTVVDERTGKRYQIPVSQEGTVKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            K  +TV D    K+ ++ V ++GT+   D  +I +   +     YDPG+ +TA   S I YIDG+EGIL YRGYPI++LAE   FLE  YLL+YG LP++ +  D+
Sbjct:    5 KAHITVND----KKIELSV-RKGTL-GPDVIEIASLYKETDTFTYDPGFTSTASCESKITYIDGNEGILLYRGYPIDQLAEKGDFLESCYLLLYGELPTKQEKIDF 104          
The following BLAST results are available for this feature:
BLAST of EY720620 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
CISY_RICSI8.773e-1645.26Citrate synthase (Fragment) OS=Rickettsia sibirica... [more]
CISY_RICRH8.773e-1645.26Citrate synthase (Fragment) OS=Rickettsia rhipicep... [more]
CISY_RICPA8.773e-1645.26Citrate synthase (Fragment) OS=Rickettsia parkeri ... [more]
CISY_RICMA8.773e-1645.26Citrate synthase (Fragment) OS=Rickettsia massilia... [more]
CISY_RICCN8.773e-1645.26Citrate synthase OS=Rickettsia conorii GN=gltA PE=... [more]
CISY_RICAE8.773e-1645.26Citrate synthase OS=Rickettsia africae (strain ESF... [more]
CISY_ASTRI8.773e-1645.26Citrate synthase (Fragment) OS=Astrakhan rickettsi... [more]
CISY_RICJA1.146e-1544.21Citrate synthase (Fragment) OS=Rickettsia japonica... [more]
CISY_RICAU3.334e-1544.21Citrate synthase (Fragment) OS=Rickettsia australi... [more]
CISY_BARHE3.334e-1543.40Citrate synthase OS=Bartonella henselae GN=gltA PE... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-703-012-A11-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720620 ID=EY720620; Name=EY720620; organism=Citrus sinensis; type=EST; length=823bp
CCACGCGTCCGATCAAACTTGAAGGCAAATTCATTTATTCAATTTGTATT
GACTCATTCATCAACCGAATCAATTGGACTAGAGCTCGTTTTATCTAGTT
TTGCTTCAAAAACAATGGCGCCAAGCGTAGAATCATCGTCGGCCGTTACA
GCTCGTGGGCGGTTGGCCGTACTGACAGCTCATTTGGCATCAACCGAGTC
AAATCAAGGCAGGCTCATCGAGCCATGGTGCACCTCTGCTCAGTCCATGG
TACCACCTCCGGGAAATCTCAAGGGCAGCTTGACCGTCGTCGACGAACGA
ACCGGCAAAAGATACCAGATACCTGTCTCTCAGGAAGGCACCGTTAAAGC
CACCGACTTCAAGAAGATAACAACAGGAAAGAACGACAAGGGTTTGAAAC
TGTATGATCCGGGGTACTTGAACACGGCGCCTGTGAGATCATCAATTTGT
TATATTGATGGAGATGAGGGTATCCTTANATACAGAGGCTACCCTATTGA
GGAATTGGCAGAGTCCAGTTCTTTCTTGGAAGTCGCTTATCTTTTGATGT
ATGGGAATTTGCCTTCCGAGAGTCAGCTGACAGACTGGGGAATTGGCTGT
GTGTGAGGATTCTGGCGTGGCGGAGGGAGTTTGGGATATTATCCAAGCGA
TGCCGTCGTGATGCCACCCTATGGGAAGTGGTTGTCAGAGCTATGAATGC
TCTTTCCTATCTTGATCGGGAATGCCGACCCTGGTCTGAGACGCCAAAAT
AGGACGATGGCGAGACACGGGGGGGACCAGCGCACTGCACAGTATAGGTG
AGAAGGGACCGACGCATGGAGGG
back to top