EY720620

Overview
NameEY720620
Unique NameEY720620
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length823
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY_BARQU (Citrate synthase OS=Bartonella quintana GN=gltA PE=3 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 3.686e-14
Identity = 35/62 (56.45%), Postives = 45/62 (72.58%), Query Frame = 1
Query:  403 YDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            YDPG+ +TA   S I YIDGD+GIL Y GYPI++LAE   FLE  YLL+YG LP++ +  D+
Sbjct:   43 YDPGFTSTASCESKITYIDGDKGILLYCGYPIDQLAEKGDFLESCYLLLYGELPTKQEKIDF 104          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY_PSEAE (Citrate synthase OS=Pseudomonas aeruginosa GN=gltA PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 1.072e-13
Identity = 33/58 (56.90%), Postives = 45/58 (77.59%), Query Frame = 1
Query:  403 YDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQ 576
            +DPG+++TA   S I YIDGD+G+L +RGYPIE+LAE S +LE  YLL+ G LP+ +Q
Sbjct:   43 FDPGFMSTASCESKITYIDGDKGVLLHRGYPIEQLAEKSDYLETCYLLLNGELPTAAQ 100          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY_SALTY (Citrate synthase OS=Salmonella typhimurium GN=gltA PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.401e-13
Identity = 32/67 (47.76%), Postives = 50/67 (74.63%), Query Frame = 1
Query:  388 KGLKLYDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            KG+  +DPG+ +TA   S I +IDGDEGIL +RG+PI++LA  S++LEV Y+L+YG  P++ +  ++
Sbjct:   38 KGVFTFDPGFTSTASCESKITFIDGDEGILLHRGFPIDQLATDSNYLEVCYILLYGEKPTQEEYDEF 104          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY_CORGL (Citrate synthase OS=Corynebacterium glutamicum GN=gltA PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.389e-13
Identity = 35/66 (53.03%), Postives = 48/66 (72.73%), Query Frame = 1
Query:  382 NDKGLKLYDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQL 579
            ++ GL  +DPGY++T    S I YIDGD GIL YRGY I +LAE+++F EV+YLL+ G LP+  +L
Sbjct:   44 SETGLITFDPGYVSTGSTESKITYIDGDAGILRYRGYDIADLAENATFNEVSYLLINGELPTPDEL 109          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY_ECOLI (Citrate synthase OS=Escherichia coli (strain K12) GN=gltA PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.951e-13
Identity = 32/67 (47.76%), Postives = 49/67 (73.13%), Query Frame = 1
Query:  388 KGLKLYDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            KG+  +DPG+ +TA   S I +IDGDEGIL +RG+PI++LA  S++LEV Y+L+ G  P++ Q  ++
Sbjct:   38 KGVFTFDPGFTSTASCESKITFIDGDEGILLHRGFPIDQLATDSNYLEVCYILLNGEKPTQEQYDEF 104          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY_ECOL6 (Citrate synthase OS=Escherichia coli O6 GN=gltA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.951e-13
Identity = 32/67 (47.76%), Postives = 49/67 (73.13%), Query Frame = 1
Query:  388 KGLKLYDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            KG+  +DPG+ +TA   S I +IDGDEGIL +RG+PI++LA  S++LEV Y+L+ G  P++ Q  ++
Sbjct:   38 KGVFTFDPGFTSTASCESKITFIDGDEGILLHRGFPIDQLATDSNYLEVCYILLNGEKPTQEQYDEF 104          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY_COXBU (Citrate synthase OS=Coxiella burnetii GN=gltA PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.549e-12
Identity = 32/62 (51.61%), Postives = 45/62 (72.58%), Query Frame = 1
Query:  391 GLKLYDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQ 576
            G    D G+ +TA   S I +IDG++GIL YRGYPI++LA+ S ++EV YLLMYG LP++ +
Sbjct:   38 GAYALDVGFYSTAACESKITFIDGEKGILLYRGYPIDQLADKSDYMEVCYLLMYGELPNKGE 99          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY_ACIAN (Citrate synthase OS=Acinetobacter calcoaceticus subsp. anitratus GN=gltA PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 5.885e-12
Identity = 38/97 (39.18%), Postives = 57/97 (58.76%), Query Frame = 1
Query:  304 GKRYQIPVSQEGTV--KATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            GK  ++P+   GT+     D K +       G   +DPG++ TA   S I +IDGD+GIL +RGYPI++LA  + +LE  YLL+ G LP+  Q  ++
Sbjct:   15 GKEIELPI-YSGTLGPDVIDVKDVLAS----GHFTFDPGFMATASCESKITFIDGDKGILLHRGYPIDQLATQADYLETCYLLLNGELPTAEQKVEF 106          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY_ACEAC (Citrate synthase OS=Acetobacter aceti GN=aarA PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.885e-12
Identity = 44/107 (41.12%), Postives = 63/107 (58.88%), Query Frame = 1
Query:  262 GNLKGSLTVVDERTGKRYQIPVSQEGTV--KATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQ 576
            G L  +   VD   GK  ++PV   GT+     D +K+       G+  +DPGY  TA   S I +IDGD+G+L +RGYPI +L E++S+ EV YLL+ G LP++ Q
Sbjct:    8 GKLSTATISVD---GKSAEMPVLS-GTLGPDVIDIRKLPA---QLGVFTFDPGYGETAACNSKITFIDGDKGVLLHRGYPIAQLDENASYEEVIYLLLNGELPNKVQ 107          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY_PYRFU (Citrate synthase OS=Pyrococcus furiosus GN=gltA PE=1 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 1.949e-11
Identity = 31/51 (60.78%), Postives = 40/51 (78.43%), Query Frame = 1
Query:  436 RSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            +++ICYIDG EG L YRGY +EELAE S+F EV YLL +G LPS S+L ++
Sbjct:   18 QTNICYIDGKEGKLYYRGYSVEELAELSTFEEVVYLLWWGKLPSLSELENF 68          

HSP 2 Score: 24.2534 bits (51), Expect = 1.949e-11
Identity = 9/27 (33.33%), Postives = 18/27 (66.67%), Query Frame = 2
Query:  599 VCEDSGVAEGVWDIIQAMPS*CHPMGS 679
            + +  G+ + V +I++A+P   HPMG+
Sbjct:   72 LAKSRGLPKEVIEIMEALPKNTHPMGA 98          
The following BLAST results are available for this feature:
BLAST of EY720620 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
CISY_BARQU3.686e-1456.45Citrate synthase OS=Bartonella quintana GN=gltA PE... [more]
CISY_PSEAE1.072e-1356.90Citrate synthase OS=Pseudomonas aeruginosa GN=gltA... [more]
CISY_SALTY1.401e-1347.76Citrate synthase OS=Salmonella typhimurium GN=gltA... [more]
CISY_CORGL2.389e-1353.03Citrate synthase OS=Corynebacterium glutamicum GN=... [more]
CISY_ECOLI6.951e-1347.76Citrate synthase OS=Escherichia coli (strain K12) ... [more]
CISY_ECOL66.951e-1347.76Citrate synthase OS=Escherichia coli O6 GN=gltA PE... [more]
CISY_COXBU1.549e-1251.61Citrate synthase OS=Coxiella burnetii GN=gltA PE=3... [more]
CISY_ACIAN5.885e-1239.18Citrate synthase OS=Acinetobacter calcoaceticus su... [more]
CISY_ACEAC5.885e-1241.12Citrate synthase OS=Acetobacter aceti GN=aarA PE=1... [more]
CISY_PYRFU1.949e-1160.78Citrate synthase OS=Pyrococcus furiosus GN=gltA PE... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-012-A11-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720620 ID=EY720620; Name=EY720620; organism=Citrus sinensis; type=EST; length=823bp
CCACGCGTCCGATCAAACTTGAAGGCAAATTCATTTATTCAATTTGTATT
GACTCATTCATCAACCGAATCAATTGGACTAGAGCTCGTTTTATCTAGTT
TTGCTTCAAAAACAATGGCGCCAAGCGTAGAATCATCGTCGGCCGTTACA
GCTCGTGGGCGGTTGGCCGTACTGACAGCTCATTTGGCATCAACCGAGTC
AAATCAAGGCAGGCTCATCGAGCCATGGTGCACCTCTGCTCAGTCCATGG
TACCACCTCCGGGAAATCTCAAGGGCAGCTTGACCGTCGTCGACGAACGA
ACCGGCAAAAGATACCAGATACCTGTCTCTCAGGAAGGCACCGTTAAAGC
CACCGACTTCAAGAAGATAACAACAGGAAAGAACGACAAGGGTTTGAAAC
TGTATGATCCGGGGTACTTGAACACGGCGCCTGTGAGATCATCAATTTGT
TATATTGATGGAGATGAGGGTATCCTTANATACAGAGGCTACCCTATTGA
GGAATTGGCAGAGTCCAGTTCTTTCTTGGAAGTCGCTTATCTTTTGATGT
ATGGGAATTTGCCTTCCGAGAGTCAGCTGACAGACTGGGGAATTGGCTGT
GTGTGAGGATTCTGGCGTGGCGGAGGGAGTTTGGGATATTATCCAAGCGA
TGCCGTCGTGATGCCACCCTATGGGAAGTGGTTGTCAGAGCTATGAATGC
TCTTTCCTATCTTGATCGGGAATGCCGACCCTGGTCTGAGACGCCAAAAT
AGGACGATGGCGAGACACGGGGGGGACCAGCGCACTGCACAGTATAGGTG
AGAAGGGACCGACGCATGGAGGG
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