EY720617

Overview
NameEY720617
Unique NameEY720617
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720617 vs. ExPASy Swiss-Prot
Match: RPK2_ARATH (LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana GN=RPK2 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.107e-11
Identity = 34/93 (36.56%), Postives = 56/93 (60.22%), Query Frame = 3
Query:  558 VHLNMSQVVKATRNFSPSLRIGEGGFGTVYKAXLXNGLLVAIKRAKKEQFENLQTEFSSEVELLSKIDHRNLVKLLGFVDKGNDRLIITEFVP 836
            V +    VV+AT NF+ S  IG GGFG  YKA +   ++VAIKR    +F+ +Q +F +E++ L ++ H NLV L+G+     +  ++  ++P
Sbjct:  860 VPITFDNVVRATGNFNASNLIGNGGFGATYKAEISQDVVVAIKRLSIGRFQGVQ-QFHAEIKTLGRLRHPNLVTLIGYHASETEMFLVYNYLP 951          
BLAST of EY720617 vs. ExPASy Swiss-Prot
Match: Y5241_ARATH (Probable receptor-like protein kinase At5g24010 OS=Arabidopsis thaliana GN=At5g24010 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.711e-11
Identity = 33/93 (35.48%), Postives = 59/93 (63.44%), Query Frame = 3
Query:  555 SVHLNMSQVVKATRNFSPSLRIGEGGFGTVYKAXLXNGLLVAIKRAKKEQFENLQTEFSSEVELLSKIDHRNLVKLLGFVDKGNDRLIITEFV 833
            ++ ++ +++   T NF  SL IG GGFG V++  L +   VA+KR      + L  EF SE+ +LSKI HR+LV L+G+ ++ ++ +++ E++
Sbjct:  474 TLRISFAELQSGTNNFDRSLVIGVGGFGMVFRGSLKDNTKVAVKRGSPGSRQGLP-EFLSEITILSKIRHRHLVSLVGYCEEQSEMILVYEYM 565          
BLAST of EY720617 vs. ExPASy Swiss-Prot
Match: WAKLE_ARATH (Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana GN=WAKL5 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.711e-11
Identity = 34/87 (39.08%), Postives = 59/87 (67.82%), Query Frame = 3
Query:  576 QVVKATRNFSPSLRIGEGGFGTVYKAXLXNGLLVAIKRAKKEQFENLQTEFSSEVELLSKIDHRNLVKLLGFVDKGNDRLIITEFVP 836
            ++ KAT NFS    +G+G  GTVYK  + +G ++A+KR+K    + L+ +F +E+ LLS+I+HRN+VKL+G   +    +++ E++P
Sbjct:  424 ELKKATDNFSVKRVLGKGSQGTVYKGMMVDGKIIAVKRSKVVDEDKLE-KFINEIILLSQINHRNIVKLIGCCLETEVPILVYEYIP 509          
BLAST of EY720617 vs. ExPASy Swiss-Prot
Match: ANX1_ARATH (Receptor-like protein kinase ANXUR1 OS=Arabidopsis thaliana GN=ANX1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.711e-11
Identity = 31/89 (34.83%), Postives = 56/89 (62.92%), Query Frame = 3
Query:  567 NMSQVVKATRNFSPSLRIGEGGFGTVYKAXLXNGLLVAIKRAKKEQFENLQTEFSSEVELLSKIDHRNLVKLLGFVDKGNDRLIITEFV 833
            ++ ++   T+NF  S  IG GGFG VYK  +     VA+K++     + L  EF +E+ELLS++ H++LV L+G+ D+G +  ++ +++
Sbjct:  506 SLPEIKHGTQNFDDSNVIGVGGFGKVYKGVIDGTTKVAVKKSNPNSEQGLN-EFETEIELLSRLRHKHLVSLIGYCDEGGEMCLVYDYM 593          
The following BLAST results are available for this feature:
BLAST of EY720617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
RPK2_ARATH5.107e-1136.56LRR receptor-like serine/threonine-protein kinase ... [more]
Y5241_ARATH8.711e-1135.48Probable receptor-like protein kinase At5g24010 OS... [more]
WAKLE_ARATH8.711e-1139.08Wall-associated receptor kinase-like 5 OS=Arabidop... [more]
ANX1_ARATH8.711e-1134.83Receptor-like protein kinase ANXUR1 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-012-A08-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720617 ID=EY720617; Name=EY720617; organism=Citrus sinensis; type=EST; length=836bp
CCACGCGTCCGGAGAAAGCAGTCTTGATATTTCATCAAATTTTGCTCCTT
CCAGTTTCCTGCTATTTCTGCAATTTTGGGGAATCTTTGCGTCTGGGTTT
GCAATACAGTCAAAGGTTTGAAGGCTATTCTGGAAGTGATTACTGCGGGT
TGGACCTCTCACTAGCCAAGTTGTCTTTCAGTCCTGGAAGAAAAAATTTA
CAAAAGGAGGTGAAGGAAGAACCGAAAACCCATGATGCTGGTCAAAATTT
CCATCCTAGAGAAGAGAAGAACTATTCTGGATCTCTTTCAACTACCAAAA
AGGTTGGGATAGCTGCAACTGGATTGTTCGTCATGTCTTGTGCTCTTCTC
TGTCCTTGCTTTTATAAAAAACGGAAAGCAACTGCCCACACTGTTCTTGC
CAGGGACCCAAATTCAATGGATTCTGCTTCCTCCTTAGACGTGAATTCTG
GTTCTGAAAAGGTTTCTGGTGCTGATAAGGTTCCACCAAGTCCAATGAGG
GTACCACCTAGTCCTTCTAGATTCACAATGTCTCCAAAACTTAATAGAAT
TGGATCTGTACATCTCAATATGAGTCAGGTTGTCAAAGCTACCCGTAATT
TCTCACCATCACTACGAATTGGTGAAGGTGGCTTTGGAACTGTCTACAAG
GCCCANCTANAAAATGGCCTGCTGGTCGCCATTAAACGAGCAAAGAAGGA
GCAGTTTGAGAACCTGCAAACCGAATTCAGTAGTGAAGTTGAACTTCTAT
CCAAAATTGATCATCGGAATCTAGTGAAGCTACTGGGTTTTGTTGATAAA
GGAAATGACCGCCTTATTATAACAGAGTTCGTACCA
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