EY720617

Overview
NameEY720617
Unique NameEY720617
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length836
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720617 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 4.619e-12
Identity = 38/100 (38.00%), Postives = 57/100 (57.00%), Query Frame = 3
Query:  567 NMSQVVKATRNFSPSLRIGEGGFGTVYK----------AXLXNGLLVAIKRAKKEQFENLQTEFSSEVELLSKIDHRNLVKLLGFVDKGNDRLIITEFVP 836
            N   +  AT+NF P   +G+GGFG VY+          + + +G++VAIKR   E  +    E+ SEV  L  + HRNLVKLLG+  +  + L++ EF+P
Sbjct:   75 NFLDLKTATKNFKPDSMLGQGGFGKVYRGWVDATTLAPSRVGSGMIVAIKRLNSESVQGF-AEWRSEVNFLGMLSHRNLVKLLGYCREDKELLLVYEFMP 173          
BLAST of EY720617 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.619e-12
Identity = 37/90 (41.11%), Postives = 56/90 (62.22%), Query Frame = 3
Query:  564 LNMSQVVKATRNFSPSLRIGEGGFGTVYKAXLXNGLLVAIKRAKKEQFENLQTEFSSEVELLSKIDHRNLVKLLGFVDKGNDRLIITEFV 833
            L  + +++AT  F     +G GGFG VYKA L +G +VAIK+      +    EF++E+E + KI HRNLV LLG+   G +RL++ E++
Sbjct:  876 LTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQG-DREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYM 964          
BLAST of EY720617 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 4.619e-12
Identity = 37/90 (41.11%), Postives = 56/90 (62.22%), Query Frame = 3
Query:  564 LNMSQVVKATRNFSPSLRIGEGGFGTVYKAXLXNGLLVAIKRAKKEQFENLQTEFSSEVELLSKIDHRNLVKLLGFVDKGNDRLIITEFV 833
            L  + +++AT  F     +G GGFG VYKA L +G +VAIK+      +    EF++E+E + KI HRNLV LLG+   G +RL++ E++
Sbjct:  876 LTFADLLEATNGFHNDSLVGSGGFGDVYKAQLKDGSVVAIKKLIHVSGQG-DREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYM 964          
BLAST of EY720617 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.879e-12
Identity = 35/79 (44.30%), Postives = 51/79 (64.56%), Query Frame = 3
Query:  552 GSVHLNMSQVVKATRNFSPSLRIGEGGFGTVYKAXLXNGLLVAIKRAKKEQFENLQTEFSSEVELLSKIDHRNLVKLLG 788
            GS+   + ++ KAT NFS    IG GGFG VYK  L +G ++A+K+  + +F+    EF +EVE++S + HRNLV L G
Sbjct:  279 GSIWFKIEELEKATNNFSQKNFIGRGGFGFVYKGVLPDGSVIAVKKVIESEFQG-DAEFRNEVEIISNLKHRNLVPLRG 356          
BLAST of EY720617 vs. ExPASy Swiss-Prot
Match: WAKLK_ARATH (Putative wall-associated receptor kinase-like 11 OS=Arabidopsis thaliana GN=WAKL11 PE=3 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 7.879e-12
Identity = 39/87 (44.83%), Postives = 59/87 (67.82%), Query Frame = 3
Query:  576 QVVKATRNFSPSLRIGEGGFGTVYKAXLXNGLLVAIKRAKKEQFENLQTEFSSEVELLSKIDHRNLVKLLGFVDKGNDRLIITEFVP 836
            ++ KAT NFS S  +G+GG GTVYK  L +G  VA+K++K    + L+ EF +EV +LS+I+HR++VKLLG   +     ++ EF+P
Sbjct:  443 ELEKATDNFSESRILGQGGQGTVYKGMLVDGRTVAVKKSKVVDEDKLE-EFINEVVILSQINHRHVVKLLGCCLETEVPTLVYEFIP 528          
BLAST of EY720617 vs. ExPASy Swiss-Prot
Match: WAKLF_ARATH (Wall-associated receptor kinase-like 6 OS=Arabidopsis thaliana GN=WAKL6 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.879e-12
Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 3
Query:  576 QVVKATRNFSPSLRIGEGGFGTVYKAXLXNGLLVAIKRAKKEQFENLQTEFSSEVELLSKIDHRNLVKLLGFVDKGNDRLIITEFVP 836
            ++ KAT NFS +  +G+GG GTVYK  L  G +VA+KR+K    E    EF +EV LLS+I+HRN+VKLLG        +++ E++P
Sbjct:  424 ELKKATDNFSMNRVLGQGGQGTVYKGMLAEGRIVAVKRSKVVG-EGKMEEFINEVVLLSQINHRNIVKLLGCCLGTEVPVLVYEYIP 509          
BLAST of EY720617 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 71.2478 bits (173), Expect = 7.879e-12
Identity = 36/101 (35.64%), Postives = 61/101 (60.40%), Query Frame = 3
Query:  561 HLNMSQVVKATRNFSPSLRIGEGGFGTVYKAXL----------XNGLLVAIKRAKKEQFENLQTEFSSEVELLSKIDHRNLVKLLGFVDKGNDRLIITEFV 833
            + ++S++  ATRNF P   +GEGGFG V+K  +            G+++A+KR  +E F+    E+ +E+  L ++DH NLVKL+G+  +   RL++ EF+
Sbjct:   55 NFSLSELKSATRNFRPDSVVGEGGFGCVFKGWIDESSLAPSKPGTGIVIAVKRLNQEGFQG-HREWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFM 154          
BLAST of EY720617 vs. ExPASy Swiss-Prot
Match: Y5614_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana GN=At1g56140 PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.029e-11
Identity = 36/88 (40.91%), Postives = 56/88 (63.64%), Query Frame = 3
Query:  573 SQVVKATRNFSPSLRIGEGGFGTVYKAXLXNGLLVAIKRAKKEQFENLQTEFSSEVELLSKIDHRNLVKLLGFVDKGNDRLIITEFVP 836
            S++  AT++F PS ++GEGGFG VYK  L +G  VA+K       +  + +F +E+  +S + HRNLVKL G   +G  RL++ E++P
Sbjct:  684 SELKSATQDFDPSNKLGEGGFGPVYKGKLNDGREVAVKLLSVGSRQG-KGQFVAEIVAISAVQHRNLVKLYGCCYEGEHRLLVYEYLP 770          
BLAST of EY720617 vs. ExPASy Swiss-Prot
Match: WAKLN_ARATH (Wall-associated receptor kinase-like 18 OS=Arabidopsis thaliana GN=WAKL18 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.029e-11
Identity = 39/89 (43.82%), Postives = 59/89 (66.29%), Query Frame = 3
Query:  567 NMSQVVKATRNFSPSLRIGEGGFGTVYKAXLXNGLLVAIKRAKKEQFENLQTEFSSEVELLSKIDHRNLVKLLGFVDKGNDRLIITEFV 833
            N  ++ KAT NFS +  +G GG GTVYK  L +G  VA+K++K    + LQ EF +EV +LS+I+HR++VKLLG   +    +++ EF+
Sbjct:  442 NSRELEKATENFSENRVLGHGGQGTVYKGMLVDGRTVAVKKSKVIDEDKLQ-EFINEVVILSQINHRHVVKLLGCCLETEVPMLVYEFI 529          
BLAST of EY720617 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.029e-11
Identity = 35/89 (39.33%), Postives = 57/89 (64.04%), Query Frame = 3
Query:  567 NMSQVVKATRNFSPSLRIGEGGFGTVYKAXLXNGLLVAIKRAKKEQFENLQTEFSSEVELLSKIDHRNLVKLLGFVDKGNDRLIITEFV 833
            ++ ++  AT +FS    +G GGFG VYK  L +G LVA+KR K+E+    + +F +EVE++S   HRNL++L GF     +RL++  ++
Sbjct:  294 SLRELQVATDSFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYM 382          
The following BLAST results are available for this feature:
BLAST of EY720617 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
CX32_ARATH4.619e-1238.00Probable serine/threonine-protein kinase Cx32, chl... [more]
BRI1_SOLPE4.619e-1241.11Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
BRI1_SOLLC4.619e-1241.11Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
Y1105_ARATH7.879e-1244.30Probable receptor-like protein kinase At1g11050 OS... [more]
WAKLK_ARATH7.879e-1244.83Putative wall-associated receptor kinase-like 11 O... [more]
WAKLF_ARATH7.879e-1245.98Wall-associated receptor kinase-like 6 OS=Arabidop... [more]
NAK_ARATH7.879e-1235.64Probable serine/threonine-protein kinase NAK OS=Ar... [more]
Y5614_ARATH1.029e-1140.91Probable LRR receptor-like serine/threonine-protei... [more]
WAKLN_ARATH1.029e-1143.82Wall-associated receptor kinase-like 18 OS=Arabido... [more]
SERK2_ARATH1.029e-1139.33Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-703-012-A08-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720617 ID=EY720617; Name=EY720617; organism=Citrus sinensis; type=EST; length=836bp
CCACGCGTCCGGAGAAAGCAGTCTTGATATTTCATCAAATTTTGCTCCTT
CCAGTTTCCTGCTATTTCTGCAATTTTGGGGAATCTTTGCGTCTGGGTTT
GCAATACAGTCAAAGGTTTGAAGGCTATTCTGGAAGTGATTACTGCGGGT
TGGACCTCTCACTAGCCAAGTTGTCTTTCAGTCCTGGAAGAAAAAATTTA
CAAAAGGAGGTGAAGGAAGAACCGAAAACCCATGATGCTGGTCAAAATTT
CCATCCTAGAGAAGAGAAGAACTATTCTGGATCTCTTTCAACTACCAAAA
AGGTTGGGATAGCTGCAACTGGATTGTTCGTCATGTCTTGTGCTCTTCTC
TGTCCTTGCTTTTATAAAAAACGGAAAGCAACTGCCCACACTGTTCTTGC
CAGGGACCCAAATTCAATGGATTCTGCTTCCTCCTTAGACGTGAATTCTG
GTTCTGAAAAGGTTTCTGGTGCTGATAAGGTTCCACCAAGTCCAATGAGG
GTACCACCTAGTCCTTCTAGATTCACAATGTCTCCAAAACTTAATAGAAT
TGGATCTGTACATCTCAATATGAGTCAGGTTGTCAAAGCTACCCGTAATT
TCTCACCATCACTACGAATTGGTGAAGGTGGCTTTGGAACTGTCTACAAG
GCCCANCTANAAAATGGCCTGCTGGTCGCCATTAAACGAGCAAAGAAGGA
GCAGTTTGAGAACCTGCAAACCGAATTCAGTAGTGAAGTTGAACTTCTAT
CCAAAATTGATCATCGGAATCTAGTGAAGCTACTGGGTTTTGTTGATAAA
GGAAATGACCGCCTTATTATAACAGAGTTCGTACCA
back to top